RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 RBP1P09455 135 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 HIST1H2AGP0C0S8 130 aaPredicted RBP19.96■□□□□ 0.79
CSPG5-201ENST00000264723 HIST1H2ADP20671 130 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 CNSTQ6PJW8 725 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 PTGR2Q8N8N7 351 aaPredicted RBP19.96■□□□□ 0.79
CSPG5-201ENST00000264723 ESAMQ96AP7 390 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 HIST1H2AHQ96KK5 128 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 HIST1H2AJQ99878 128 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 PAAF1Q9BRP4 392 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 RTKNQ9BST9 563 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 H2AFJQ9BTM1 129 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 POLR1EQ9GZS1 481 aaKnown RBP19.96■□□□□ 0.79
CSPG5-201ENST00000264723 PNPLA8Q9NP80 782 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 UBA2Q9UBT2 640 aaPredicted RBP19.96■□□□□ 0.79
CSPG5-201ENST00000264723 VTI1BQ9UEU0 232 aa19.96■□□□□ 0.79
CSPG5-201ENST00000264723 CRTAMO95727 393 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 DHRS4L1P0CG22 281 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 ATP5F1P24539 256 aaPredicted RBP19.95■□□□□ 0.78
CSPG5-201ENST00000264723 CRABP2P29373 138 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 GHRHRQ02643 423 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 NAB1Q13506 487 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 C16orf87Q6PH81 154 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 LPCAT2Q7L5N7 544 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 GLT6D1Q7Z4J2 308 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.95■□□□□ 0.78
CSPG5-201ENST00000264723 ADAMTS6Q9UKP5 1117 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 ADAM28Q9UKQ2 775 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 SF3B1O75533 1304 aaKnown RBP eCLIP19.95■□□□□ 0.78
CSPG5-201ENST00000264723 XIRP1Q702N8 1843 aaKnown RBP19.95■□□□□ 0.78
CSPG5-201ENST00000264723 ZBTB42B2RXF5 422 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 HOXA11P31270 313 aaPredicted RBP19.95■□□□□ 0.78
CSPG5-201ENST00000264723 GPR158Q5T848 1215 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 MAPK15Q8TD08 544 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 HEXDCQ8WVB3 486 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 FAM192AQ9GZU8 254 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 GLOD4Q9HC38 313 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 TNFAIP8O95379 198 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 RGS4P49798 205 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 RAP1GDS1P52306 607 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 INSCQ1MX18 579 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 CTC1Q2NKJ3 1217 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 LDLRAD1Q5T700 205 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 PKN3Q6P5Z2 889 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 MIER2Q8N344 545 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 TMEM174Q8WUU8 243 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 WDR70Q9NW82 654 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 DNAJC28Q9NX36 388 aa19.95■□□□□ 0.78
CSPG5-201ENST00000264723 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.95■□□□□ 0.78
CSPG5-201ENST00000264723 FGF10O15520 208 aaPredicted RBP19.94■□□□□ 0.78
CSPG5-201ENST00000264723 ZBTB14O43829 449 aa19.94■□□□□ 0.78
CSPG5-201ENST00000264723 RTN3O95197 1032 aaPredicted RBP19.94■□□□□ 0.78
CSPG5-201ENST00000264723 AHSGP02765 367 aa19.94■□□□□ 0.78
CSPG5-201ENST00000264723 EPHB3P54753 998 aa19.94■□□□□ 0.78
CSPG5-201ENST00000264723 PURAQ00577 322 aaKnown RBP19.94■□□□□ 0.78
CSPG5-201ENST00000264723 CLVS1Q8IUQ0 354 aaPredicted RBP19.94■□□□□ 0.78
CSPG5-201ENST00000264723 DHRS4Q9BTZ2 278 aa19.94■□□□□ 0.78
CSPG5-201ENST00000264723 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.94■□□□□ 0.78
CSPG5-201ENST00000264723 LINC00032P0C843 101 aa19.94■□□□□ 0.78
CSPG5-201ENST00000264723 PROZP22891 400 aa19.94■□□□□ 0.78
CSPG5-201ENST00000264723 EEF1DP29692 281 aaKnown RBP19.94■□□□□ 0.78
CSPG5-201ENST00000264723 ZIK1Q3SY52 487 aaPredicted RBP19.94■□□□□ 0.78
CSPG5-201ENST00000264723 NAPRTQ6XQN6 538 aa19.94■□□□□ 0.78
CSPG5-201ENST00000264723 ZNF467Q7Z7K2 595 aaPredicted RBP19.94■□□□□ 0.78
CSPG5-201ENST00000264723 LAMB2P55268 1798 aa19.94■□□□□ 0.78
CSPG5-201ENST00000264723 DNAJC25-GNG10A0A024R161 153 aa19.94■□□□□ 0.78
CSPG5-201ENST00000264723 AOC1P19801 751 aa19.94■□□□□ 0.78
CSPG5-201ENST00000264723 NEDD8Q15843 81 aa19.94■□□□□ 0.78
CSPG5-201ENST00000264723 CYP51A1Q16850 503 aa19.94■□□□□ 0.78
CSPG5-201ENST00000264723 OR9I1Q8NGQ6 314 aa19.94■□□□□ 0.78
CSPG5-201ENST00000264723 LPGAT1Q92604 370 aa19.94■□□□□ 0.78
CSPG5-201ENST00000264723 THUMPD3Q9BV44 507 aaKnown RBP19.94■□□□□ 0.78
CSPG5-201ENST00000264723 NFKBIZQ9BYH8 718 aa19.94■□□□□ 0.78
CSPG5-201ENST00000264723 PRKD2Q9BZL6 878 aa19.94■□□□□ 0.78
CSPG5-201ENST00000264723 CLPBQ9H078 707 aa19.94■□□□□ 0.78
CSPG5-201ENST00000264723 MOCS1Q9NZB8 636 aa19.94■□□□□ 0.78
CSPG5-201ENST00000264723 PSMA4P25789 261 aaKnown RBP19.93■□□□□ 0.78
CSPG5-201ENST00000264723 TUFMP49411 452 aaKnown RBP19.93■□□□□ 0.78
CSPG5-201ENST00000264723 KRT33BQ14525 404 aa19.93■□□□□ 0.78
CSPG5-201ENST00000264723 CNPY1Q3B7I2 92 aa19.93■□□□□ 0.78
CSPG5-201ENST00000264723 CWF19L1Q69YN2 538 aaKnown RBP19.93■□□□□ 0.78
CSPG5-201ENST00000264723 C1orf50Q9BV19 199 aa19.93■□□□□ 0.78
CSPG5-201ENST00000264723 ARHGAP39Q9C0H5 1083 aa19.93■□□□□ 0.78
CSPG5-201ENST00000264723 GBA3Q9H227 469 aa19.93■□□□□ 0.78
CSPG5-201ENST00000264723 GTF2IRD1Q9UHL9 959 aa19.93■□□□□ 0.78
CSPG5-201ENST00000264723 GABRQQ9UN88 632 aa19.93■□□□□ 0.78
CSPG5-201ENST00000264723 WARSP23381 471 aaKnown RBP19.93■□□□□ 0.78
CSPG5-201ENST00000264723 CACUL1Q86Y37 369 aa19.93■□□□□ 0.78
CSPG5-201ENST00000264723 AGO3Q9H9G7 860 aaKnown RBP19.93■□□□□ 0.78
CSPG5-201ENST00000264723 WWOXQ9NZC7 414 aa19.93■□□□□ 0.78
CSPG5-201ENST00000264723 PRR23AA6NEV1 266 aa19.93■□□□□ 0.78
CSPG5-201ENST00000264723 PPIDQ08752 370 aaKnown RBP19.93■□□□□ 0.78
CSPG5-201ENST00000264723 CUZD1Q86UP6 607 aa19.93■□□□□ 0.78
CSPG5-201ENST00000264723 ACVR1CQ8NER5 493 aa19.93■□□□□ 0.78
CSPG5-201ENST00000264723 LRTOMTQ8WZ04 291 aa19.93■□□□□ 0.78
CSPG5-201ENST00000264723 SCLYQ96I15 445 aa19.93■□□□□ 0.78
CSPG5-201ENST00000264723 ACBD6Q9BR61 282 aa19.93■□□□□ 0.78
CSPG5-201ENST00000264723 GIMAP2Q9UG22 337 aa19.93■□□□□ 0.78
CSPG5-201ENST00000264723 TIMM22Q9Y584 194 aa19.93■□□□□ 0.78
CSPG5-201ENST00000264723 SNRPB2P08579 225 aaKnown RBP19.92■□□□□ 0.78
CSPG5-201ENST00000264723 LTA4HP09960 611 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms