RNA–Protein interactions for RNA: ENST00000264454.7

SEC22C-201, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22C, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-201ENST00000264454 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.05□□□□□ -0.8
SEC22C-201ENST00000264454 APCDD1Q8J025 514 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 CELF5Q8N6W0 485 aaKnown RBP10.05□□□□□ -0.8
SEC22C-201ENST00000264454 TTC16Q8NEE8 873 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 ARMC2Q8NEN0 867 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 OR13J1Q8NGT2 312 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 OR6P1Q8NGX9 317 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 ZNF398Q8TD17 642 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 BLOC1S5Q8TDH9 187 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 SREK1Q8WXA9 508 aaKnown RBP10.05□□□□□ -0.8
SEC22C-201ENST00000264454 IRF7Q92985 503 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 PPP2R3CQ969Q6 453 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 HDAC10Q969S8 669 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 ZNF707Q96C28 371 aaPredicted RBP10.05□□□□□ -0.8
SEC22C-201ENST00000264454 TSPAN17Q96FV3 270 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 LMLNQ96KR4 655 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 SPHK2Q9NRA0 654 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 DZANK1Q9NVP4 752 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 NLE1Q9NVX2 485 aaPredicted RBP10.05□□□□□ -0.8
SEC22C-201ENST00000264454 MARK1Q9P0L2 795 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 SIRPGQ9P1W8 387 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.05□□□□□ -0.8
SEC22C-201ENST00000264454 KLHL14Q9P2G3 628 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 SLC17A6Q9P2U8 582 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 MSRAQ9UJ68 235 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 CHKBQ9Y259 395 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 ARL2BPQ9Y2Y0 163 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 MRPS23Q9Y3D9 190 aaKnown RBP10.05□□□□□ -0.8
SEC22C-201ENST00000264454 ACTL7AQ9Y615 435 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 COL6A3P12111 3177 aa10.05□□□□□ -0.8
SEC22C-201ENST00000264454 A0A087X1B8 175 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 CCDC78A2IDD5 438 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 WDR91A4D1P6 747 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 GOLGA8TH3BQL2 631 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 SCAMP3O14828 347 aaKnown RBP10.04□□□□□ -0.8
SEC22C-201ENST00000264454 PER2O15055 1255 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 PLIN3O60664 434 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 SOCS5O75159 536 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 CSPG5O95196 566 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 IGSF6O95976 241 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 PRLP01236 227 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 C2P06681 752 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 STMN1P16949 149 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 OGNP20774 298 aaKnown RBP10.04□□□□□ -0.8
SEC22C-201ENST00000264454 LPOP22079 712 aaPredicted RBP10.04□□□□□ -0.8
SEC22C-201ENST00000264454 ALDH3A1P30838 453 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 SLC1A2P43004 574 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 MAGEA10P43363 369 aaPredicted RBP10.04□□□□□ -0.8
SEC22C-201ENST00000264454 GRIA4P48058 902 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 KPNA2P52292 529 aaKnown RBP10.04□□□□□ -0.8
SEC22C-201ENST00000264454 PRKAA2P54646 552 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 SLC12A2P55011 1212 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 RAB10P61026 200 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 SNRPD1P62314 119 aaKnown RBP10.04□□□□□ -0.8
SEC22C-201ENST00000264454 BCL2L1Q07817 233 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 CTBP1Q13363 440 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 GALNT3Q14435 633 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 GRM3Q14832 879 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 DUSP6Q16828 381 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 SLC5A9Q2M3M2 681 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 PITRM1Q5JRX3 1037 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 ARMC12Q5T9G4 340 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 N4BP2L1Q5TBK1 243 aaPredicted RBP10.04□□□□□ -0.8
SEC22C-201ENST00000264454 RAPH1Q70E73 1250 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 GLT6D1Q7Z4J2 308 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 CLEC14AQ86T13 490 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 CILP2Q8IUL8 1156 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 ARID3BQ8IVW6 561 aaPredicted RBP10.04□□□□□ -0.8
SEC22C-201ENST00000264454 PLPP6Q8IY26 295 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 ADGRG2Q8IZP9 1017 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 GBP7Q8N8V2 638 aaPredicted RBP10.04□□□□□ -0.8
SEC22C-201ENST00000264454 CCDC63Q8NA47 563 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 RDH11Q8TC12 318 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 WFDC5Q8TCV5 224 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 SMG7Q92540 1137 aaKnown RBP10.04□□□□□ -0.8
SEC22C-201ENST00000264454 E2F7Q96AV8 911 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 TUBGCP5Q96RT8 1024 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 TCF12Q99081 682 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 TSSK1BQ9BXA7 367 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 CEP44Q9C0F1 390 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 SFXN1Q9H9B4 322 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 MAGEE1Q9HCI5 957 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 SLC25A13Q9UJS0 675 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 SLC39A10Q9ULF5 831 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 CCL26Q9Y258 94 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 HS3ST2Q9Y278 367 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 VPS9D1Q9Y2B5 631 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 ACOT9Q9Y305 439 aa10.04□□□□□ -0.8
SEC22C-201ENST00000264454 FAM95CA0A1B0GW59 222 aa10.03□□□□□ -0.8
SEC22C-201ENST00000264454 A0A1W2PQ67 120 aa10.03□□□□□ -0.8
SEC22C-201ENST00000264454 NRG2O14511 850 aaPredicted RBP10.03□□□□□ -0.8
SEC22C-201ENST00000264454 CD3EAPO15446 510 aaKnown RBP10.03□□□□□ -0.8
SEC22C-201ENST00000264454 FZD6O60353 706 aa10.03□□□□□ -0.8
SEC22C-201ENST00000264454 GJB3O75712 270 aa10.03□□□□□ -0.8
SEC22C-201ENST00000264454 HAUS5O94927 633 aa10.03□□□□□ -0.8
SEC22C-201ENST00000264454 GSRP00390 522 aa10.03□□□□□ -0.8
SEC22C-201ENST00000264454 PROCP04070 461 aa10.03□□□□□ -0.8
SEC22C-201ENST00000264454 GRK2P25098 689 aa10.03□□□□□ -0.8
SEC22C-201ENST00000264454 GABRB3P28472 473 aa10.03□□□□□ -0.8
SEC22C-201ENST00000264454 CD70P32970 193 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms