RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 RMND5BQ96G75 393 aaPredicted RBP14.06□□□□□ -0.16
CDH3-201ENST00000264012 SEMA6AQ9H2E6 1030 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 KIAA1522Q9P206 1035 aaPredicted RBP14.06□□□□□ -0.16
CDH3-201ENST00000264012 ANKDD1BA6NHY2 528 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 SYN3O14994 580 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 ONECUT3O60422 494 aaPredicted RBP14.06□□□□□ -0.16
CDH3-201ENST00000264012 EPN2O95208 641 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 CENPAP49450 140 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 RFWD3Q6PCD5 774 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 DRICH1Q6PGQ1 229 aaPredicted RBP14.06□□□□□ -0.16
CDH3-201ENST00000264012 CNSTQ6PJW8 725 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 RP9Q8TA86 221 aaKnown RBP14.06□□□□□ -0.16
CDH3-201ENST00000264012 AGAP11Q8TF27 550 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 MIEF2Q96C03 454 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 PPP3R2Q96LZ3 170 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 GMLQ99445 158 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 C9orf16Q9BUW7 83 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 TMEM109Q9BVC6 243 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 TCHHQ07283 1943 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 VIRMAQ69YN4 1812 aaKnown RBP14.05□□□□□ -0.16
CDH3-201ENST00000264012 FAM220BPB1ANY3 271 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 C1QTNF3-AMACRE9PGA6 284 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 QSOX1O00391 747 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 TLL1O43897 1013 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 KCNH1O95259 989 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 HK2P52789 917 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 DEFA1P59665 94 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 DEFA3P59666 94 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 ATAD3BQ5T9A4 648 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 TXNDC11Q6PKC3 985 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 CPNE8Q86YQ8 564 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 BTN2A2Q8WVV5 523 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 CAPNS2Q96L46 248 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 ZFP14Q9HCL3 533 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 HMGXB4Q9UGU5 601 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 ZNF510Q9Y2H8 683 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 ENTPD5O75356 428 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 LGR5O75473 907 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 OTCP00480 354 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 FTH1P02794 183 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 THOP1P52888 689 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 RPS7P62081 194 aaKnown RBP14.05□□□□□ -0.16
CDH3-201ENST00000264012 SOWAHAQ2M3V2 549 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 ADGRD1Q6QNK2 874 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 NET1Q7Z628 596 aaPredicted RBP14.05□□□□□ -0.16
CDH3-201ENST00000264012 CLYBLQ8N0X4 340 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 OR4K2Q8NGD2 314 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 UPF1Q92900 1129 aaKnown RBP eCLIP14.05□□□□□ -0.16
CDH3-201ENST00000264012 MCRS1Q96EZ8 462 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 MYO19Q96H55 970 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 NDEL1Q9GZM8 345 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 LEF1Q9UJU2 399 aaPredicted RBP14.05□□□□□ -0.16
CDH3-201ENST00000264012 ANAPC2Q9UJX6 822 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 MTF2Q9Y483 593 aaPredicted RBP14.05□□□□□ -0.16
CDH3-201ENST00000264012 YJEFN3A6XGL0 299 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 ATG7O95352 703 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 PRKCZQ05513 592 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 CCL14Q16627 93 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 VARS2Q5ST30 1063 aaKnown RBP14.05□□□□□ -0.16
CDH3-201ENST00000264012 IRGCQ6NXR0 463 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 ZDHHC13Q8IUH4 622 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 ZNF513Q8N8E2 541 aaPredicted RBP14.05□□□□□ -0.16
CDH3-201ENST00000264012 CDH19Q9H159 772 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 MINDY3Q9H8M7 445 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 TXNRD2Q9NNW7 524 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 TRMT13Q9NUP7 481 aaKnown RBP14.05□□□□□ -0.16
CDH3-201ENST00000264012 GRHL1Q9NZI5 618 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 SLC12A4Q9UP95 1085 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 AP3M1Q9Y2T2 418 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 NR2E3Q9Y5X4 410 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 CHD2O14647 1828 aaKnown RBP14.05□□□□□ -0.16
CDH3-201ENST00000264012 ARHGEF9O43307 516 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 HS6ST1O60243 411 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 CNOT3O75175 753 aaKnown RBP14.05□□□□□ -0.16
CDH3-201ENST00000264012 PRKCQQ04759 706 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 MFSD3Q96ES6 412 aa14.05□□□□□ -0.16
CDH3-201ENST00000264012 NDST3O95803 873 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 MAPKAPK3Q16644 382 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 DHRSXQ8N5I4 330 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 SPATA22Q8NHS9 363 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 DNAJB14Q8TBM8 379 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 SLC9A7Q96T83 725 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 TRMOQ9BU70 441 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 RPS6KB2Q9UBS0 482 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 RPP40O75818 363 aaKnown RBP14.04□□□□□ -0.16
CDH3-201ENST00000264012 PIK3R1P27986 724 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 MAPK9P45984 424 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 CAPZA2P47755 286 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 RABGGTBP53611 331 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 ATXN1P54253 815 aaKnown RBP14.04□□□□□ -0.16
CDH3-201ENST00000264012 RPL38P63173 70 aaKnown RBP14.04□□□□□ -0.16
CDH3-201ENST00000264012 SH3PXD2AQ5TCZ1 1133 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 SLAIN1Q8ND83 568 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 PTCD2Q8WV60 388 aaKnown RBP14.04□□□□□ -0.16
CDH3-201ENST00000264012 GLMNQ92990 594 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 UBE2E3Q969T4 207 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 NMD3Q96D46 503 aaKnown RBP14.04□□□□□ -0.16
CDH3-201ENST00000264012 PRRG3Q9BZD7 231 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 SPAG4Q9NPE6 437 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 CA12O43570 354 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms