RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 FSBPO95073 299 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 IFNB1P01574 187 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 TBC1D3HP0C7X1 549 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 MAOBP27338 520 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 MAT2AP31153 395 aaKnown RBP18.47■□□□□ 0.55
SDF4-201ENST00000263741 CCNG2Q16589 344 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 TBC1D3GQ6DHY5 549 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 TBC1D3CQ6IPX1 549 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 TTC27Q6P3X3 843 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 SLC36A4Q6YBV0 504 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 TBC1D3Q8IZP1 549 aaPredicted RBP18.47■□□□□ 0.55
SDF4-201ENST00000263741 ACTRT1Q8TDG2 376 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 KLK6Q92876 244 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 VAT1Q99536 393 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 GBA3Q9H227 469 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 PCDH12Q9NPG4 1184 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 DKK3Q9UBP4 350 aa18.47■□□□□ 0.55
SDF4-201ENST00000263741 TTC7AQ9ULT0 858 aaPredicted RBP18.47■□□□□ 0.55
SDF4-201ENST00000263741 SOCS5O75159 536 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 STK10O94804 968 aaKnown RBP18.46■□□□□ 0.55
SDF4-201ENST00000263741 PCDH8O95206 1070 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 PGLSO95336 258 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 CPP00450 1065 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 CTPS1P17812 591 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 XPAP23025 273 aaPredicted RBP18.46■□□□□ 0.55
SDF4-201ENST00000263741 NBL1P41271 181 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 GALNT3Q14435 633 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 UGP2Q16851 508 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 RALGPS1Q5JS13 557 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 LPCAT2Q7L5N7 544 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 CREG2Q8IUH2 290 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 MAIP1Q8WWC4 291 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 WRAP53Q9BUR4 548 aaKnown RBP18.46■□□□□ 0.55
SDF4-201ENST00000263741 ARFGAP3Q9NP61 516 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 FADS3Q9Y5Q0 445 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 PDE2AO00408 941 aaPredicted RBP18.46■□□□□ 0.55
SDF4-201ENST00000263741 CES2O00748 559 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 SLC7A4O43246 635 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 ALPIP09923 528 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 ZSCAN5DPP0CG00 497 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 SFSWAPQ12872 951 aaKnown RBP18.46■□□□□ 0.55
SDF4-201ENST00000263741 OLIG2Q13516 323 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 SYCP2LQ5T4T6 812 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 ARMC12Q5T9G4 340 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 SEL1L3Q68CR1 1132 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 BRAT1Q6PJG6 821 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 LPCAT1Q8NF37 534 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 OR2T34Q8NGX1 318 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 BIRC7Q96CA5 298 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 FERMT1Q9BQL6 677 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 TRHDEQ9UKU6 1024 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 SCN8AQ9UQD0 1980 aa18.46■□□□□ 0.55
SDF4-201ENST00000263741 EP300Q09472 2414 aaPredicted RBP18.46■□□□□ 0.55
SDF4-201ENST00000263741 LRRC72A6NJI9 287 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 MEI4A8MW99 385 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 NEMP1O14524 444 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 METTL18O95568 372 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 PRLP01236 227 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 IGHV4-34P06331 123 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 ITPKAP23677 461 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 CCDC6Q16204 474 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 ARHGEF18Q6ZSZ5 1173 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 SUMF1Q8NBK3 374 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 IPMKQ8NFU5 416 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 MYOCQ99972 504 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 FRMD8P1Q9BZ68 369 aaPredicted RBP18.45■□□□□ 0.54
SDF4-201ENST00000263741 IRF2BPLQ9H1B7 796 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 PCDH9Q9HC56 1237 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.45■□□□□ 0.54
SDF4-201ENST00000263741 KNL1Q8NG31 2342 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 GOLGA8CPA6NN73 597 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 AREL1O15033 823 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 RNGTTO60942 597 aaKnown RBP18.45■□□□□ 0.54
SDF4-201ENST00000263741 ITGAVP06756 1048 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 PRLRP16471 622 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 BRD3Q15059 726 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 MAGOHBQ96A72 148 aaKnown RBP18.45■□□□□ 0.54
SDF4-201ENST00000263741 TADA1Q96BN2 335 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 ZC3H10Q96K80 434 aaKnown RBP18.45■□□□□ 0.54
SDF4-201ENST00000263741 FCRL5Q96RD9 977 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 MLPHQ9BV36 600 aaPredicted RBP18.45■□□□□ 0.54
SDF4-201ENST00000263741 CDC23Q9UJX2 597 aa18.45■□□□□ 0.54
SDF4-201ENST00000263741 ZFR2Q9UPR6 939 aaKnown RBP18.45■□□□□ 0.54
SDF4-201ENST00000263741 TMEM131Q92545 1883 aa18.44■□□□□ 0.54
SDF4-201ENST00000263741 A0A1W2PQU0 124 aa18.44■□□□□ 0.54
SDF4-201ENST00000263741 CFAP69A5D8W1 941 aa18.44■□□□□ 0.54
SDF4-201ENST00000263741 C5orf60A6NFR6 353 aa18.44■□□□□ 0.54
SDF4-201ENST00000263741 FZD6O60353 706 aa18.44■□□□□ 0.54
SDF4-201ENST00000263741 OPHN1O60890 802 aa18.44■□□□□ 0.54
SDF4-201ENST00000263741 KIAA0895LQ68EN5 471 aa18.44■□□□□ 0.54
SDF4-201ENST00000263741 ITPRIPL1Q6GPH6 555 aa18.44■□□□□ 0.54
SDF4-201ENST00000263741 KDELC1Q6UW63 502 aa18.44■□□□□ 0.54
SDF4-201ENST00000263741 PIH1D2Q8WWB5 315 aa18.44■□□□□ 0.54
SDF4-201ENST00000263741 NAP1L3Q99457 506 aaPredicted RBP18.44■□□□□ 0.54
SDF4-201ENST00000263741 EBF2Q9HAK2 575 aa18.44■□□□□ 0.54
SDF4-201ENST00000263741 RAB23Q9ULC3 237 aa18.44■□□□□ 0.54
SDF4-201ENST00000263741 RIF1Q5UIP0 2472 aaKnown RBP18.44■□□□□ 0.54
SDF4-201ENST00000263741 CES1P23141 567 aa18.43■□□□□ 0.54
SDF4-201ENST00000263741 MMP12P39900 470 aa18.43■□□□□ 0.54
SDF4-201ENST00000263741 CHRNA4P43681 627 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms