RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 KCNE1P15382 129 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 ARL1P40616 181 aaPredicted RBP9.18□□□□□ -0.94
MSH4-201ENST00000263187 TRIM25Q14258 630 aaKnown RBP9.18□□□□□ -0.94
MSH4-201ENST00000263187 TMEM207Q6UWW9 146 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 CHST15Q7LFX5 561 aaPredicted RBP9.18□□□□□ -0.94
MSH4-201ENST00000263187 BHLHA9Q7RTU4 235 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 KCTD13Q8WZ19 329 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 SLCO4A1Q96BD0 722 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 MRGPRX2Q96LB1 330 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 HAPLN3Q96S86 360 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 ABHD16BQ9H3Z7 469 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 CNGB3Q9NQW8 809 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 ST3GAL5Q9UNP4 418 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 DOCK3Q8IZD9 2030 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 A0A1B0GTL3 188 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 PRSS51A0A1B0GVH4 220 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 TRIM38O00635 465 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 SOCS2O14508 198 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 DENRO43583 198 aaKnown RBP9.18□□□□□ -0.94
MSH4-201ENST00000263187 SOAT2O75908 522 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 ASLP04424 464 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 APOA4P06727 396 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 LINC00032P0C843 101 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 NCK1P16333 377 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 SLC5A2P31639 672 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 CCR1P32246 355 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 SCNN1AP37088 669 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 GPR15P49685 360 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 SCNN1BP51168 640 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 SLC10A7Q0GE19 358 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 PFKFB4Q16877 469 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 B3GNT6Q6ZMB0 384 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 ZBTB49Q6ZSB9 765 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 BNIPLQ7Z465 357 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 MIB1Q86YT6 1006 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 FAM47BQ8NA70 645 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 TSPAN14Q8NG11 270 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 BLOC1S5Q8TDH9 187 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 HBEGFQ99075 208 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 MCMBPQ9BTE3 642 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 SENP6Q9GZR1 1112 aaPredicted RBP9.18□□□□□ -0.94
MSH4-201ENST00000263187 PRDM16Q9HAZ2 1276 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 MID2Q9UJV3 735 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 ANKRD6Q9Y2G4 727 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 AAR2Q9Y312 384 aaKnown RBP9.18□□□□□ -0.94
MSH4-201ENST00000263187 TRAF6Q9Y4K3 522 aa9.18□□□□□ -0.94
MSH4-201ENST00000263187 HEATR9A2RTY3 570 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 ARL5CA6NH57 179 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 HHLA1C9JL84 531 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 GABRDO14764 452 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 CNTN5O94779 1100 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 IPO13O94829 963 aaKnown RBP9.17□□□□□ -0.94
MSH4-201ENST00000263187 HAPLN1P10915 354 aaPredicted RBP9.17□□□□□ -0.94
MSH4-201ENST00000263187 MTHFD1P11586 935 aaKnown RBP9.17□□□□□ -0.94
MSH4-201ENST00000263187 ZNF26P17031 533 aaPredicted RBP9.17□□□□□ -0.94
MSH4-201ENST00000263187 ATP5F1P24539 256 aaPredicted RBP9.17□□□□□ -0.94
MSH4-201ENST00000263187 PSEN2P49810 448 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 GRB7Q14451 532 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 IHHQ14623 411 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 LINC00523Q86TU6 105 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 RETREG3Q86VR2 466 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 OFCC1Q8IZS5 231 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 ZNF786Q8N393 782 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 OR10T2Q8NGX3 314 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 BRI3BPQ8WY22 251 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 NTAN1Q96AB6 310 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 PPP1R10Q96QC0 940 aaKnown RBP9.17□□□□□ -0.94
MSH4-201ENST00000263187 MRPL57Q9BQC6 102 aaKnown RBP9.17□□□□□ -0.94
MSH4-201ENST00000263187 MAF1Q9H063 256 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 ZNF385DQ9H6B1 395 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 VTI1BQ9UEU0 232 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 IPO11Q9UI26 975 aaKnown RBP9.17□□□□□ -0.94
MSH4-201ENST00000263187 USP22Q9UPT9 525 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 TBC1D30Q9Y2I9 924 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 TIMM22Q9Y584 194 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 OTOFQ9HC10 1997 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 SMIM35A0A1B0GVV1 85 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 SMIM31A0A1B0GVY4 71 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 ARHGAP10A1A4S6 786 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 ERI2A8K979 691 aaKnown RBP9.17□□□□□ -0.94
MSH4-201ENST00000263187 H3BMM5 538 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 PFDN1O60925 122 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 H2AFYO75367 372 aaKnown RBP9.17□□□□□ -0.94
MSH4-201ENST00000263187 ARPP19P56211 112 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 XIAPP98170 497 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 IKBKEQ14164 716 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 DDR2Q16832 855 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 UGP2Q16851 508 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 HMBOX1Q6NT76 420 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 ADCY4Q8NFM4 1077 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 DNAJB14Q8TBM8 379 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 VPS33AQ96AX1 596 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 SMARCD1Q96GM5 515 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 DNAI2Q9GZS0 605 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 NMUR1Q9HB89 426 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 ABI2Q9NYB9 513 aaPredicted RBP9.17□□□□□ -0.94
MSH4-201ENST00000263187 EVLQ9UI08 416 aaPredicted RBP9.17□□□□□ -0.94
MSH4-201ENST00000263187 CNOT6Q9ULM6 557 aaKnown RBP9.17□□□□□ -0.94
MSH4-201ENST00000263187 RAB26Q9ULW5 256 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 FAM50BQ9Y247 325 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms