RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 TBATAQ96M53 351 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 GFM1Q96RP9 751 aaKnown RBP12.35□□□□□ -0.43
TRAF4-202ENST00000262396 ERGIC2Q96RQ1 377 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 TUBGCP5Q96RT8 1024 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 APOOQ9BUR5 198 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 DPH1Q9BZG8 443 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 EDEM3Q9BZQ6 932 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 KLC2Q9H0B6 622 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 GPR27Q9NS67 375 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 LHX3Q9UBR4 397 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 ATP8A1Q9Y2Q0 1164 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 OR1A2Q9Y585 309 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 LAMA5O15230 3695 aa12.35□□□□□ -0.43
TRAF4-202ENST00000262396 GOLGA6CA6NDK9 693 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 GOLGA6BA6NDN3 693 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 CAPN8A6NHC0 703 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 EIF3CLB5ME19 914 aaKnown RBP12.34□□□□□ -0.43
TRAF4-202ENST00000262396 TMX2-CTNND1H3BSU7 103 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 J3KR12 359 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 TK2O00142 265 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 PRAMEF11O60813 436 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 TNFSF15O95150 251 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 MBD3O95983 291 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 PRB1P04280 392 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 PRKCGP05129 697 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 GOLGA6DP0CG33 693 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 SCNN1BP51168 640 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 SRP54P61011 504 aaKnown RBP12.34□□□□□ -0.43
TRAF4-202ENST00000262396 ZNF235Q14590 738 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 NFATC4Q14934 902 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 ACOX1Q15067 660 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 WSCD2Q2TBF2 565 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 ZSCAN23Q3MJ62 389 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 PERM1Q5SV97 790 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 TPRG1LQ5T0D9 272 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 TAF8Q7Z7C8 310 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 SRLQ86TD4 932 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 CAMK1DQ8IU85 385 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 SLC35F3Q8IY50 421 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 ARL10Q8N8L6 244 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 OR6C4Q8NGE1 309 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 PCDH19Q8TAB3 1148 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 PDCD6IPQ8WUM4 868 aaKnown RBP12.34□□□□□ -0.43
TRAF4-202ENST00000262396 WDR92Q96MX6 357 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 EIF3CQ99613 913 aaKnown RBP12.34□□□□□ -0.43
TRAF4-202ENST00000262396 BOCQ9BWV1 1114 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 NOL6Q9H6R4 1146 aaKnown RBP12.34□□□□□ -0.43
TRAF4-202ENST00000262396 SUDS3Q9H7L9 328 aaPredicted RBP12.34□□□□□ -0.43
TRAF4-202ENST00000262396 ZWILCHQ9H900 591 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 GOLGA6AQ9NYA3 693 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 MYO1AQ9UBC5 1043 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 NEU3Q9UQ49 428 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 SCINQ9Y6U3 715 aa12.34□□□□□ -0.43
TRAF4-202ENST00000262396 DOCK9Q9BZ29 2069 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 CCDC187A0A096LP49 1063 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 LY6G6EA0A0G2JKS1 128 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 A8MX80 341 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 PDE2AO00408 941 aaPredicted RBP12.33□□□□□ -0.44
TRAF4-202ENST00000262396 TEX33O43247 280 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 ZW10O43264 779 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 ATMINO43313 823 aaPredicted RBP12.33□□□□□ -0.44
TRAF4-202ENST00000262396 JMJD7P0C870 316 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 ARL4AP40617 200 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 SSR1P43307 286 aaKnown RBP12.33□□□□□ -0.44
TRAF4-202ENST00000262396 TPM4P67936 248 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 RHDQ02161 417 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 KLHL30Q0D2K2 578 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 MTM1Q13496 603 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 ARHGEF7Q14155 803 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 RFTN1Q14699 578 aaPredicted RBP12.33□□□□□ -0.44
TRAF4-202ENST00000262396 DENND2CQ68D51 928 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 LVRNQ6Q4G3 990 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 RFX8Q6ZV50 586 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 ZNF605Q86T29 641 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 SDR16C5Q8N3Y7 309 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 FBXO39Q8N4B4 442 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 Q8N9G6 341 aaPredicted RBP12.33□□□□□ -0.44
TRAF4-202ENST00000262396 LSM14AQ8ND56 463 aaKnown RBP12.33□□□□□ -0.44
TRAF4-202ENST00000262396 CCDC74AQ96AQ1 378 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 ZNF653Q96CK0 615 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 TRIM11Q96F44 468 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 SLC39A8Q9C0K1 460 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 ZMYND15Q9H091 742 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 DPEP2Q9H4A9 486 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 CPNE5Q9HCH3 593 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 MRPL47Q9HD33 250 aaKnown RBP12.33□□□□□ -0.44
TRAF4-202ENST00000262396 AKAP7Q9P0M2 348 aaPredicted RBP12.33□□□□□ -0.44
TRAF4-202ENST00000262396 CNOT8Q9UFF9 292 aaKnown RBP12.33□□□□□ -0.44
TRAF4-202ENST00000262396 SEPT3Q9UH03 358 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 ENTPD2Q9Y5L3 495 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 U3KQA8 63 aa12.33□□□□□ -0.44
TRAF4-202ENST00000262396 BAHCC1Q9P281 2608 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 LRRC53A6NM62 1247 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 H3BRJ5 948 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 AGRPO00253 132 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 DXOO77932 396 aaKnown RBP12.32□□□□□ -0.44
TRAF4-202ENST00000262396 SERPINC1P01008 464 aa12.32□□□□□ -0.44
TRAF4-202ENST00000262396 FTLP02792 175 aaPredicted RBP12.32□□□□□ -0.44
TRAF4-202ENST00000262396 RPLP0P05388 317 aaKnown RBP12.32□□□□□ -0.44
TRAF4-202ENST00000262396 KRT10P13645 584 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms