RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 SERPINB12Q96P63 405 aa15.91■□□□□ 0.14
CCDC90B-201ENST00000260054 HHIPQ96QV1 700 aa15.91■□□□□ 0.14
CCDC90B-201ENST00000260054 ADGRE3Q9BY15 652 aa15.91■□□□□ 0.14
CCDC90B-201ENST00000260054 ZMYND15Q9H091 742 aa15.91■□□□□ 0.14
CCDC90B-201ENST00000260054 ARNT2Q9HBZ2 717 aa15.91■□□□□ 0.14
CCDC90B-201ENST00000260054 CASS4Q9NQ75 786 aa15.91■□□□□ 0.14
CCDC90B-201ENST00000260054 ZDHHC18Q9NUE0 388 aa15.91■□□□□ 0.14
CCDC90B-201ENST00000260054 ANKRD66B4E2M5 251 aa15.9■□□□□ 0.14
CCDC90B-201ENST00000260054 SMAPO00193 183 aa15.9■□□□□ 0.14
CCDC90B-201ENST00000260054 AVILO75366 819 aa15.9■□□□□ 0.14
CCDC90B-201ENST00000260054 ADH1BP00325 375 aa15.9■□□□□ 0.14
CCDC90B-201ENST00000260054 PRKCGP05129 697 aa15.9■□□□□ 0.14
CCDC90B-201ENST00000260054 HLA-DPA1P20036 260 aa15.9■□□□□ 0.14
CCDC90B-201ENST00000260054 C5AR1P21730 350 aa15.9■□□□□ 0.14
CCDC90B-201ENST00000260054 MAGEA9P43362 315 aa15.9■□□□□ 0.14
CCDC90B-201ENST00000260054 TNNT3P45378 269 aaPredicted RBP15.9■□□□□ 0.14
CCDC90B-201ENST00000260054 CLCN5P51795 746 aa15.9■□□□□ 0.14
CCDC90B-201ENST00000260054 RPL26P61254 145 aaKnown RBP15.9■□□□□ 0.14
CCDC90B-201ENST00000260054 QPCTQ16769 361 aa15.9■□□□□ 0.14
CCDC90B-201ENST00000260054 UGP2Q16851 508 aa15.9■□□□□ 0.14
CCDC90B-201ENST00000260054 TSTD1Q8NFU3 115 aa15.9■□□□□ 0.14
CCDC90B-201ENST00000260054 HCAR2Q8TDS4 363 aa15.9■□□□□ 0.14
CCDC90B-201ENST00000260054 HMGB4Q8WW32 186 aa15.9■□□□□ 0.14
CCDC90B-201ENST00000260054 SIPA1Q96FS4 1042 aa15.9■□□□□ 0.14
CCDC90B-201ENST00000260054 IER2Q9BTL4 223 aa15.9■□□□□ 0.14
CCDC90B-201ENST00000260054 EPHX3Q9H6B9 360 aa15.9■□□□□ 0.14
CCDC90B-201ENST00000260054 SERGEFQ9UGK8 458 aa15.9■□□□□ 0.14
CCDC90B-201ENST00000260054 RPL26L1Q9UNX3 145 aaKnown RBP15.9■□□□□ 0.14
CCDC90B-201ENST00000260054 A0A1W2PQ67 120 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 NDC80O14777 642 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 DNTTP04053 509 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 FGF1P05230 155 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 ALPIP09923 528 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 TIMP2P16035 220 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 TPH1P17752 444 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 CTPS1P17812 591 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 P2RY2P41231 377 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 GRIA4P48058 902 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 EPHB1P54762 984 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 SARNPP82979 210 aaKnown RBP15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 CNTN1Q12860 1018 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 CDH17Q12864 832 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 MSLNQ13421 630 aaPredicted RBP15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 ANO7Q6IWH7 933 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 LRRC8BQ6P9F7 803 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 KIAA1324Q6UXG2 1013 aaKnown RBP15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 DNAAF3Q8N9W5 541 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 MDGA1Q8NFP4 955 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 PBXIP1Q96AQ6 731 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 PABPC3Q9H361 631 aaKnown RBP15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 DYRK4Q9NR20 520 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 PHTF1Q9UMS5 762 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 ZDBF2Q9HCK1 2354 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 A0A0J9YYE9 177 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 A0A1W2PP55 124 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 UPK3BL1B0FP48 263 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 UPK3BL2E5RIL1 263 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 TRBC1P01850 177 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 PIRTP0C851 137 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 ABL2P42684 1182 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 MAGEA3P43357 314 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 NEK3P51956 506 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 CAV1Q03135 178 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 ZBTB16Q05516 673 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 CUL1Q13616 776 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 HLTFQ14527 1009 aaKnown RBP eCLIP15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 FNBP1LQ5T0N5 605 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 ERN2Q76MJ5 926 aaKnown RBP15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 AGGF1Q8N302 714 aaeCLIP15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 HDAC8Q9BY41 377 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 CD93Q9NPY3 652 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 NFU1Q9UMS0 254 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 PPIL1Q9Y3C6 166 aa15.89■□□□□ 0.13
CCDC90B-201ENST00000260054 A0A0U1RQS6 177 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 SPINT1O43278 529 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 MLNP12872 115 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 ADRB3P13945 408 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 CXCL12P48061 93 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 SESN2P58004 480 aaPredicted RBP15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 VSNL1P62760 191 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 POLR2LP62875 67 aaKnown RBP15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 SEMG2Q02383 582 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 ELF2Q15723 593 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 MSS51Q4VC12 460 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 CERCAMQ5T4B2 595 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 PIP5KL1Q5T9C9 394 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 AGBL4Q5VU57 503 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 FBXL19Q6PCT2 694 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 MAMSTRQ6ZN01 415 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 TTC7BQ86TV6 843 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 RASSF3Q86WH2 238 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 HDDC3Q8N4P3 179 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 ZCCHC9Q8N567 271 aaKnown RBP15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 TMEM105Q8N8V8 129 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 RUBCNQ92622 972 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 SCRN2Q96FV2 425 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 MCCC1Q96RQ3 725 aaPredicted RBP15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 XAB2Q9HCS7 855 aaKnown RBP15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 PCDH12Q9NPG4 1184 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 FBXL12Q9NXK8 326 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms