RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 RGS18Q9NS28 235 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 COL1A2P08123 1366 aa13.58□□□□□ -0.23
VHL-201ENST00000256474 SMIM35A0A1B0GVV1 85 aa13.58□□□□□ -0.24
VHL-201ENST00000256474 ZNF487B1APH4 448 aa13.58□□□□□ -0.24
VHL-201ENST00000256474 TRIM38O00635 465 aa13.58□□□□□ -0.24
VHL-201ENST00000256474 TNFAIP8O95379 198 aa13.58□□□□□ -0.24
VHL-201ENST00000256474 THPOP40225 353 aa13.58□□□□□ -0.24
VHL-201ENST00000256474 ARSDP51689 593 aa13.58□□□□□ -0.24
VHL-201ENST00000256474 GEMP55040 296 aa13.58□□□□□ -0.24
VHL-201ENST00000256474 YWHAHQ04917 246 aaPredicted RBP13.58□□□□□ -0.24
VHL-201ENST00000256474 STX5Q13190 355 aa13.58□□□□□ -0.24
VHL-201ENST00000256474 APLFQ8IW19 511 aaPredicted RBP13.58□□□□□ -0.24
VHL-201ENST00000256474 OFCC1Q8IZS5 231 aa13.58□□□□□ -0.24
VHL-201ENST00000256474 EZH1Q92800 747 aaPredicted RBP13.58□□□□□ -0.24
VHL-201ENST00000256474 SMIM14Q96QK8 99 aa13.58□□□□□ -0.24
VHL-201ENST00000256474 UPF3AQ9H1J1 476 aaKnown RBP13.58□□□□□ -0.24
VHL-201ENST00000256474 MARCH4Q9P2E8 410 aaPredicted RBP13.58□□□□□ -0.24
VHL-201ENST00000256474 CROTQ9UKG9 612 aa13.58□□□□□ -0.24
VHL-201ENST00000256474 TRAF6Q9Y4K3 522 aa13.58□□□□□ -0.24
VHL-201ENST00000256474 RGPD3A6NKT7 1758 aaPredicted RBP13.58□□□□□ -0.24
VHL-201ENST00000256474 RGPD4Q7Z3J3 1758 aa13.58□□□□□ -0.24
VHL-201ENST00000256474 CNTN5O94779 1100 aa13.58□□□□□ -0.24
VHL-201ENST00000256474 ALOX15P16050 662 aaPredicted RBP13.58□□□□□ -0.24
VHL-201ENST00000256474 CD52P31358 61 aa13.58□□□□□ -0.24
VHL-201ENST00000256474 KCNC1P48547 511 aa13.58□□□□□ -0.24
VHL-201ENST00000256474 GALK1P51570 392 aa13.58□□□□□ -0.24
VHL-201ENST00000256474 CFAP52Q8N1V2 620 aa13.58□□□□□ -0.24
VHL-201ENST00000256474 PTGR2Q8N8N7 351 aaPredicted RBP13.58□□□□□ -0.24
VHL-201ENST00000256474 C1orf50Q9BV19 199 aa13.58□□□□□ -0.24
VHL-201ENST00000256474 UXTQ9UBK9 157 aaPredicted RBP13.58□□□□□ -0.24
VHL-201ENST00000256474 VTI1BQ9UEU0 232 aa13.58□□□□□ -0.24
VHL-201ENST00000256474 PRRC2BQ5JSZ5 2229 aaKnown RBP13.58□□□□□ -0.24
VHL-201ENST00000256474 A0A1W2PQH9 124 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 SUPT3HB4E1H0 165 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 UBXN8O00124 270 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 CHRM1P11229 460 aaPredicted RBP13.57□□□□□ -0.24
VHL-201ENST00000256474 ARNTP27540 789 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 GRK4P32298 578 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 PSMD5Q16401 504 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 PLA2G4EQ3MJ16 856 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 SLC39A12Q504Y0 691 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 TBCELQ5QJ74 424 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 IQSEC1Q6DN90 963 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 OVOS1Q6IE37 1185 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 CHST15Q7LFX5 561 aaPredicted RBP13.57□□□□□ -0.24
VHL-201ENST00000256474 SETD3Q86TU7 594 aaPredicted RBP13.57□□□□□ -0.24
VHL-201ENST00000256474 PSMG2Q969U7 264 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 MRPL57Q9BQC6 102 aaKnown RBP13.57□□□□□ -0.24
VHL-201ENST00000256474 ANKRD6Q9Y2G4 727 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 COMMD3-BMI1R4GMX3 469 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 ANK1P16157 1881 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 C7orf72A4D263 438 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 H3BMM5 538 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 PLOD2O00469 737 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 ANGPT2O15123 496 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 INPP4BO15327 924 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 H2AFYO75367 372 aaKnown RBP13.57□□□□□ -0.24
VHL-201ENST00000256474 IPO13O94829 963 aaKnown RBP13.57□□□□□ -0.24
VHL-201ENST00000256474 SNRPB2P08579 225 aaKnown RBP13.57□□□□□ -0.24
VHL-201ENST00000256474 HAPLN1P10915 354 aaPredicted RBP13.57□□□□□ -0.24
VHL-201ENST00000256474 PCSK6P29122 969 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 SLC5A3P53794 718 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 MGAT5BQ3V5L5 792 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 HECTD2Q5U5R9 776 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 RAP1GAP2Q684P5 730 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 ADGRG6Q86SQ4 1221 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 LRRC43Q8N309 656 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 NAT16Q8N8M0 369 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 TSPAN14Q8NG11 270 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 VPS33AQ96AX1 596 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 DGCR14Q96DF8 476 aaKnown RBP13.57□□□□□ -0.24
VHL-201ENST00000256474 ZNF638Q14966 1978 aaKnown RBP13.57□□□□□ -0.24
VHL-201ENST00000256474 MTHFD1P11586 935 aaKnown RBP13.57□□□□□ -0.24
VHL-201ENST00000256474 KCNE1P15382 129 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 HNRNPDQ14103 355 aaKnown RBP13.57□□□□□ -0.24
VHL-201ENST00000256474 OTUD3Q5T2D3 398 aaPredicted RBP13.57□□□□□ -0.24
VHL-201ENST00000256474 DCLRE1AQ6PJP8 1040 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 PIWIL4Q7Z3Z4 852 aaKnown RBP13.57□□□□□ -0.24
VHL-201ENST00000256474 DHFR2Q86XF0 187 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 SPPL2BQ8TCT7 592 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 C3orf30Q96M34 536 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 KIFC1Q9BW19 673 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 CATSPERBQ9H7T0 1116 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 FLRT1Q9NZU1 646 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 RIMS3Q9UJD0 308 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 FAF1Q9UNN5 650 aaPredicted RBP13.57□□□□□ -0.24
VHL-201ENST00000256474 ARL5AQ9Y689 179 aa13.57□□□□□ -0.24
VHL-201ENST00000256474 STRNO43815 780 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 LTA4HP09960 611 aaKnown RBP13.56□□□□□ -0.24
VHL-201ENST00000256474 PABPC4LP0CB38 370 aaKnown RBP13.56□□□□□ -0.24
VHL-201ENST00000256474 SMIM18P0DKX4 95 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 EEF1B2P24534 225 aaKnown RBP13.56□□□□□ -0.24
VHL-201ENST00000256474 MARC1Q5VT66 337 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 TMEM151AQ8N4L1 468 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 EFHBQ8N7U6 833 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 OR10T2Q8NGX3 314 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 MIPOL1Q8TD10 442 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 NT5C3BQ969T7 300 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 RMDN1Q96DB5 314 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 HMCESQ96FZ2 354 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms