RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 HJURPQ8NCD3 748 aaPredicted RBP18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 ALG3Q92685 438 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 MRPS7Q9Y2R9 242 aaKnown RBP18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 TPRKBQ9Y3C4 175 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 TCRBV9S1A1TA0A576 114 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 SLC9A3R1O14745 358 aaPredicted RBP18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 GPRIN3Q6ZVF9 776 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 PNPT1Q8TCS8 783 aaKnown RBP18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 RCN3Q96D15 328 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 KLRG1Q96E93 195 aa18.78■□□□□ 0.6
SMARCC1-201ENST00000254480 LRRC14BA6NHZ5 514 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 FKTNO75072 461 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 ENTPD5O75356 428 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 LPOP22079 712 aaPredicted RBP18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 TLX1P31314 330 aaPredicted RBP18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 GNA13Q14344 377 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 PTPN20Q4JDL3 420 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 KRT73Q86Y46 540 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 SVOPQ8N4V2 548 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 ZNF446Q9NWS9 450 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 GRM5P41594 1212 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 ELF3P78545 371 aaPredicted RBP18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 CDK18Q07002 472 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 KLHL23Q8NBE8 558 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 ART4Q93070 314 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 VPS35Q96QK1 796 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 ZNF670Q9BS34 389 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 MRPS26Q9BYN8 205 aaKnown RBP18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 POLR3HQ9Y535 204 aaPredicted RBP18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 NCANO14594 1321 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 A0A088AWK7 358 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 TMEM191CA6NGB0 347 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 ZW10O43264 779 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 ELFN1P0C7U0 828 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 ZNF10P21506 573 aaPredicted RBP18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 GSTM5P46439 218 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 SRP54P61011 504 aaKnown RBP18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 FAM182AQ5T1J6 154 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 GPR158Q5T848 1215 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 ASB2Q96Q27 587 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 PCDH18Q9HCL0 1135 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 PSMD11O00231 422 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 KRT36O76013 467 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 TNFAIP8O95379 198 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 RPL4P36578 427 aaKnown RBP18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 TRAF3Q13114 568 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 DLG2Q15700 870 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 RNASE11Q8TAA1 199 aaKnown RBP18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 TNKS2Q9H2K2 1166 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 FBXO5Q9UKT4 447 aa18.77■□□□□ 0.6
SMARCC1-201ENST00000254480 RASAL3Q86YV0 1011 aa18.77■□□□□ 0.59
SMARCC1-201ENST00000254480 ING5Q8WYH8 240 aa18.77■□□□□ 0.59
SMARCC1-201ENST00000254480 GPR20Q99678 358 aa18.77■□□□□ 0.59
SMARCC1-201ENST00000254480 VAV3Q9UKW4 847 aa18.77■□□□□ 0.59
SMARCC1-201ENST00000254480 H3BMM5 538 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 ZBTB11O95625 1053 aaPredicted RBP18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 PSME3P61289 254 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 POMZP3Q6PJE2 187 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 NPAS2Q99743 824 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 SGTAO43765 313 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 STBD1O95210 358 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 EIF3MQ7L2H7 374 aaKnown RBP18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 DSELQ8IZU8 1212 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 COPG2Q9UBF2 871 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 AQP1P29972 269 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 EQTNQ9NQ60 294 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 ZNF232Q9UNY5 417 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 COL3A1P02461 1466 aaPredicted RBP18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 SNX3O60493 162 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 MSCO60682 206 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 DLK2Q6UY11 383 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 DEF8Q6ZN54 512 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 SETD9Q8NE22 299 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 PANX1Q96RD7 426 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 CEP44Q9C0F1 390 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 DPEP3Q9H4B8 488 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 HIST1H2ABP04908 130 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 BUD31P41223 144 aaPredicted RBP18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 HIST3H2AQ7L7L0 130 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 HIST1H2ACQ93077 130 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 RERGQ96A58 199 aaPredicted RBP18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 LRRC19Q9H756 370 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 GIT1Q9Y2X7 761 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 ADGRB1O14514 1584 aa18.76■□□□□ 0.59
SMARCC1-201ENST00000254480 CYP2C18P33260 490 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 FEM1CQ96JP0 617 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 FTHL17Q9BXU8 183 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 R3HDM2Q9Y2K5 976 aaKnown RBP18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 U3KQV3 271 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 EFCAB10A6NFE3 127 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 BTBD19C9JJ37 291 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 RPL9P32969 192 aaKnown RBP18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 BTN2A1Q7KYR7 527 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 ADHFE1Q8IWW8 467 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 TTPALQ9BTX7 342 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 EVLQ9UI08 416 aaPredicted RBP18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 E7ENQ6 273 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 FGRP09769 529 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 CLCNKBP51801 687 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms