RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 STAT1P42224 750 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 SUOXP51687 545 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 ZNF143P52747 638 aaPredicted RBP10.42□□□□□ -0.74
VPS50-201ENST00000251739 THOP1P52888 689 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 UCNP55089 124 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 PTK2BQ14289 1009 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 IRF4Q15306 451 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 PARP15Q460N3 678 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 TMEM52BQ4KMG9 183 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 PRRT3Q5FWE3 981 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 RBM44Q6ZP01 1051 aaKnown RBP10.42□□□□□ -0.74
VPS50-201ENST00000251739 APTXQ7Z2E3 356 aaKnown RBP10.42□□□□□ -0.74
VPS50-201ENST00000251739 SLFN11Q7Z7L1 901 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 CLEC14AQ86T13 490 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 VPS36Q86VN1 386 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 RYBPQ8N488 228 aaPredicted RBP10.42□□□□□ -0.74
VPS50-201ENST00000251739 TPCN2Q8NHX9 752 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 HCAR2Q8TDS4 363 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 LMX1AQ8TE12 382 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 NAT6Q93015 286 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 ATXN7L3BQ96GX2 97 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 SLC46A1Q96NT5 459 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 IL12RB2Q99665 862 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 CNPY3Q9BT09 278 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 SYT11Q9BT88 431 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 ABCG4Q9H172 646 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 LRRC19Q9H756 370 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 THSD1Q9NS62 852 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 IPO11Q9UI26 975 aaKnown RBP10.42□□□□□ -0.74
VPS50-201ENST00000251739 FZD10Q9ULW2 581 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 PCDHGA8Q9Y5G5 932 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 ZFC3H1O60293 1989 aaKnown RBP10.42□□□□□ -0.74
VPS50-201ENST00000251739 HECTD1Q9ULT8 2610 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 NAV2Q8IVL1 2488 aa10.42□□□□□ -0.74
VPS50-201ENST00000251739 UBR5O95071 2799 aaPredicted RBP10.41□□□□□ -0.74
VPS50-201ENST00000251739 CPED1A4D0V7 1026 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 LGALS16A8MUM7 142 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 ERVH48-1M5A8F1 160 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 MUSKO15146 869 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 YY2O15391 372 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 INSIG1O15503 277 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 FGF10O15520 208 aaPredicted RBP10.41□□□□□ -0.74
VPS50-201ENST00000251739 BUB1O43683 1085 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 TM7SF2O76062 418 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 CELA2BP08218 269 aaPredicted RBP10.41□□□□□ -0.74
VPS50-201ENST00000251739 TSHRP16473 764 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 EPHB2P29323 1055 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 EIF4A3P38919 411 aaKnown RBP10.41□□□□□ -0.74
VPS50-201ENST00000251739 MMP12P39900 470 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 PEX5P50542 639 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 COPB1P53618 953 aaKnown RBP10.41□□□□□ -0.74
VPS50-201ENST00000251739 AIF1P55008 147 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 TMPRSS3P57727 454 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 RHOAP61586 193 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 RPL7AP62424 266 aaKnown RBP10.41□□□□□ -0.74
VPS50-201ENST00000251739 CXADRP78310 365 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 C19orf57Q0VDD7 668 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 SYCP1Q15431 976 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 CYTH1Q15438 398 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 NR0B2Q15466 257 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 KLHL40Q2TBA0 621 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 WSCD2Q2TBF2 565 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 C3orf38Q5JPI3 329 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 EFHC2Q5JST6 749 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 FKBP15Q5T1M5 1219 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 TTC7BQ86TV6 843 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 BPHLQ86WA6 291 aaPredicted RBP10.41□□□□□ -0.74
VPS50-201ENST00000251739 ZSWIM9Q86XI8 627 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 ZNF843Q8N446 348 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 NETO2Q8NC67 525 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 WDR48Q8TAF3 677 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 KCNE4Q8WWG9 221 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 WBP1Q96G27 269 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 VCPIP1Q96JH7 1222 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 ERGIC2Q96RQ1 377 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 C1QTNF7Q9BXJ2 289 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 DPH1Q9BZG8 443 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 HSD3B7Q9H2F3 369 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 LMBRD1Q9NUN5 540 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 FANCLQ9NW38 375 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 LIMA1Q9UHB6 759 aaKnown RBP10.41□□□□□ -0.74
VPS50-201ENST00000251739 SATB2Q9UPW6 733 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 FLNCQ14315 2725 aa10.41□□□□□ -0.74
VPS50-201ENST00000251739 LRRC10BA6NIK2 292 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 PRAMEF11O60813 436 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 PIGNO95427 931 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 C6P13671 934 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 HTR7P34969 479 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 HK3P52790 923 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 ADKP55263 362 aaKnown RBP10.4□□□□□ -0.74
VPS50-201ENST00000251739 RHDQ02161 417 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 OGDHQ02218 1023 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 RAD51Q06609 339 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 ELP6Q0PNE2 266 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 C1orf61Q13536 156 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 UGP2Q16851 508 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 ALG11Q2TAA5 492 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 C4orf48Q5BLP8 95 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 KCTD16Q68DU8 428 aa10.4□□□□□ -0.74
VPS50-201ENST00000251739 DNAJC24Q6P3W2 148 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms