RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 RFX8Q6ZV50 586 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 CAMK1DQ8IU85 385 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 PSTKQ8IV42 348 aaKnown RBP21.23■□□□□ 0.99
NEDD8-201ENST00000250495 SDR16C5Q8N3Y7 309 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 ATL2Q8NHH9 583 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 FNIP1Q8TF40 1166 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 FCRL3Q96P31 734 aaPredicted RBP21.23■□□□□ 0.99
NEDD8-201ENST00000250495 BPIFA3Q9BQP9 254 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 SNRNP25Q9BV90 132 aaKnown RBP21.23■□□□□ 0.99
NEDD8-201ENST00000250495 CLPBQ9H078 707 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 HAUS4Q9H6D7 363 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 ATP13A3Q9H7F0 1226 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 AIPL1Q9NZN9 384 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 CFAP69A5D8W1 941 aa21.22■□□□□ 0.99
NEDD8-201ENST00000250495 RASGRP1O95267 797 aa21.22■□□□□ 0.99
NEDD8-201ENST00000250495 FTLP02792 175 aaPredicted RBP21.22■□□□□ 0.99
NEDD8-201ENST00000250495 ALPIP09923 528 aa21.22■□□□□ 0.99
NEDD8-201ENST00000250495 ERCC2P18074 760 aa21.22■□□□□ 0.99
NEDD8-201ENST00000250495 SERPINA4P29622 427 aa21.22■□□□□ 0.99
NEDD8-201ENST00000250495 LIG3P49916 1009 aa21.22■□□□□ 0.99
NEDD8-201ENST00000250495 HK3P52790 923 aa21.22■□□□□ 0.99
NEDD8-201ENST00000250495 POLR2LP62875 67 aaKnown RBP21.22■□□□□ 0.99
NEDD8-201ENST00000250495 TLE3Q04726 772 aa21.22■□□□□ 0.99
NEDD8-201ENST00000250495 NSUN2Q08J23 767 aaKnown RBP eCLIP21.22■□□□□ 0.99
NEDD8-201ENST00000250495 INPP5AQ14642 412 aa21.22■□□□□ 0.99
NEDD8-201ENST00000250495 RFTN1Q14699 578 aaPredicted RBP21.22■□□□□ 0.99
NEDD8-201ENST00000250495 ANO6Q4KMQ2 910 aa21.22■□□□□ 0.99
NEDD8-201ENST00000250495 ENPP7Q6UWV6 458 aa21.22■□□□□ 0.99
NEDD8-201ENST00000250495 GPR155Q7Z3F1 870 aa21.22■□□□□ 0.99
NEDD8-201ENST00000250495 HID1Q8IV36 788 aa21.22■□□□□ 0.99
NEDD8-201ENST00000250495 SPACA3Q8IXA5 215 aa21.22■□□□□ 0.99
NEDD8-201ENST00000250495 SLC35F3Q8IY50 421 aa21.22■□□□□ 0.99
NEDD8-201ENST00000250495 ARFGAP1Q8N6T3 406 aa21.22■□□□□ 0.99
NEDD8-201ENST00000250495 TSEN2Q8NCE0 465 aaKnown RBP21.22■□□□□ 0.99
NEDD8-201ENST00000250495 APOOQ9BUR5 198 aa21.22■□□□□ 0.99
NEDD8-201ENST00000250495 CINPQ9BW66 212 aaPredicted RBP21.22■□□□□ 0.99
NEDD8-201ENST00000250495 SP110Q9HB58 689 aa21.22■□□□□ 0.99
NEDD8-201ENST00000250495 PADI4Q9UM07 663 aa21.22■□□□□ 0.99
NEDD8-201ENST00000250495 ATP8A1Q9Y2Q0 1164 aa21.22■□□□□ 0.99
NEDD8-201ENST00000250495 LRRK1Q38SD2 2015 aa21.21■□□□□ 0.99
NEDD8-201ENST00000250495 ATMINO43313 823 aaPredicted RBP21.21■□□□□ 0.99
NEDD8-201ENST00000250495 MIPP30301 263 aa21.21■□□□□ 0.99
NEDD8-201ENST00000250495 HCAR3P49019 387 aa21.21■□□□□ 0.99
NEDD8-201ENST00000250495 IL10RBQ08334 325 aa21.21■□□□□ 0.99
NEDD8-201ENST00000250495 NFATC4Q14934 902 aa21.21■□□□□ 0.99
NEDD8-201ENST00000250495 PPP6R3Q5H9R7 873 aaPredicted RBP21.21■□□□□ 0.99
NEDD8-201ENST00000250495 PERM1Q5SV97 790 aa21.21■□□□□ 0.99
NEDD8-201ENST00000250495 AFMIDQ63HM1 303 aa21.21■□□□□ 0.99
NEDD8-201ENST00000250495 IGF2-ASQ6U949 168 aa21.21■□□□□ 0.99
NEDD8-201ENST00000250495 LZTR1Q8N653 840 aa21.21■□□□□ 0.99
NEDD8-201ENST00000250495 PAF1Q8N7H5 531 aa21.21■□□□□ 0.99
NEDD8-201ENST00000250495 TSACCQ96A04 125 aaPredicted RBP21.21■□□□□ 0.99
NEDD8-201ENST00000250495 HIC2Q96JB3 615 aa21.21■□□□□ 0.99
NEDD8-201ENST00000250495 KCTD15Q96SI1 283 aaPredicted RBP21.21■□□□□ 0.99
NEDD8-201ENST00000250495 EDEM3Q9BZQ6 932 aa21.21■□□□□ 0.99
NEDD8-201ENST00000250495 THSD1Q9NS62 852 aa21.21■□□□□ 0.99
NEDD8-201ENST00000250495 CNOT8Q9UFF9 292 aaKnown RBP21.21■□□□□ 0.99
NEDD8-201ENST00000250495 SCINQ9Y6U3 715 aa21.21■□□□□ 0.99
NEDD8-201ENST00000250495 A0A1W2PQC6 194 aa21.2■□□□□ 0.98
NEDD8-201ENST00000250495 TK2O00142 265 aa21.2■□□□□ 0.98
NEDD8-201ENST00000250495 DFFAO00273 331 aa21.2■□□□□ 0.98
NEDD8-201ENST00000250495 RBMS1P29558 406 aaKnown RBP21.2■□□□□ 0.98
NEDD8-201ENST00000250495 MMP12P39900 470 aa21.2■□□□□ 0.98
NEDD8-201ENST00000250495 PRKCIP41743 596 aa21.2■□□□□ 0.98
NEDD8-201ENST00000250495 BCL2L1Q07817 233 aa21.2■□□□□ 0.98
NEDD8-201ENST00000250495 MTM1Q13496 603 aa21.2■□□□□ 0.98
NEDD8-201ENST00000250495 BROXQ5VW32 411 aa21.2■□□□□ 0.98
NEDD8-201ENST00000250495 CRTC1Q6UUV9 634 aa21.2■□□□□ 0.98
NEDD8-201ENST00000250495 ZNF571Q7Z3V5 609 aaPredicted RBP21.2■□□□□ 0.98
NEDD8-201ENST00000250495 RD3Q7Z3Z2 195 aa21.2■□□□□ 0.98
NEDD8-201ENST00000250495 GKN2Q86XP6 184 aa21.2■□□□□ 0.98
NEDD8-201ENST00000250495 ARHGAP12Q8IWW6 846 aa21.2■□□□□ 0.98
NEDD8-201ENST00000250495 LSM14AQ8ND56 463 aaKnown RBP21.2■□□□□ 0.98
NEDD8-201ENST00000250495 TRIM11Q96F44 468 aa21.2■□□□□ 0.98
NEDD8-201ENST00000250495 PEBP4Q96S96 227 aa21.2■□□□□ 0.98
NEDD8-201ENST00000250495 MRPL47Q9HD33 250 aaKnown RBP21.2■□□□□ 0.98
NEDD8-201ENST00000250495 GULP1Q9UBP9 304 aa21.2■□□□□ 0.98
NEDD8-201ENST00000250495 SATB2Q9UPW6 733 aa21.2■□□□□ 0.98
NEDD8-201ENST00000250495 ENTPD2Q9Y5L3 495 aa21.2■□□□□ 0.98
NEDD8-201ENST00000250495 TEX51A0A1B0GUA7 166 aa21.19■□□□□ 0.98
NEDD8-201ENST00000250495 TNFP01375 233 aa21.19■□□□□ 0.98
NEDD8-201ENST00000250495 RGRP47804 291 aa21.19■□□□□ 0.98
NEDD8-201ENST00000250495 RENBPP51606 427 aa21.19■□□□□ 0.98
NEDD8-201ENST00000250495 SRP54P61011 504 aaKnown RBP21.19■□□□□ 0.98
NEDD8-201ENST00000250495 KLHL30Q0D2K2 578 aa21.19■□□□□ 0.98
NEDD8-201ENST00000250495 ALG11Q2TAA5 492 aa21.19■□□□□ 0.98
NEDD8-201ENST00000250495 C3orf38Q5JPI3 329 aa21.19■□□□□ 0.98
NEDD8-201ENST00000250495 ZSWIM9Q86XI8 627 aa21.19■□□□□ 0.98
NEDD8-201ENST00000250495 ARL10Q8N8L6 244 aa21.19■□□□□ 0.98
NEDD8-201ENST00000250495 ECHDC3Q96DC8 303 aa21.19■□□□□ 0.98
NEDD8-201ENST00000250495 ATXN7L3BQ96GX2 97 aa21.19■□□□□ 0.98
NEDD8-201ENST00000250495 NAF1Q96HR8 494 aaKnown RBP21.19■□□□□ 0.98
NEDD8-201ENST00000250495 WDR92Q96MX6 357 aa21.19■□□□□ 0.98
NEDD8-201ENST00000250495 CCDC3Q9BQI4 270 aa21.19■□□□□ 0.98
NEDD8-201ENST00000250495 ZWILCHQ9H900 591 aa21.19■□□□□ 0.98
NEDD8-201ENST00000250495 TMEM63CQ9P1W3 806 aa21.19■□□□□ 0.98
NEDD8-201ENST00000250495 KLQ9UEF7 1012 aa21.19■□□□□ 0.98
NEDD8-201ENST00000250495 OR1A2Q9Y585 309 aa21.19■□□□□ 0.98
NEDD8-201ENST00000250495 PCDHGA8Q9Y5G5 932 aa21.19■□□□□ 0.98
NEDD8-201ENST00000250495 ATXN7O15265 892 aaPredicted RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms