RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 SPON2Q9BUD6 331 aa21.8■■□□□ 1.08
CLN6-201ENST00000249806 MFSD1Q9H3U5 465 aa21.8■■□□□ 1.08
CLN6-201ENST00000249806 VWA7Q9Y334 891 aa21.8■■□□□ 1.08
CLN6-201ENST00000249806 ZNF840PA6NDX5 716 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 COCHO43405 550 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 TBX10O75333 385 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 KLKB1P03952 638 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 KCNA5P22460 613 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 CLCN5P51795 746 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 CDKN2DP55273 166 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 USP41Q3LFD5 358 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 LSM12Q3MHD2 195 aaKnown RBP21.79■■□□□ 1.08
CLN6-201ENST00000249806 C5orf22Q49AR2 442 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 RIPOR1Q6ZS17 1223 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 FRMD7Q6ZUT3 714 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 STMN2Q93045 179 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 CMTM5Q96DZ9 223 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 NSMCE3Q96MG7 304 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 POMKQ9H5K3 350 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.79■■□□□ 1.08
CLN6-201ENST00000249806 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.79■■□□□ 1.08
CLN6-201ENST00000249806 MTRRQ9UBK8 725 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 G3BP2Q9UN86 482 aaKnown RBP21.79■■□□□ 1.08
CLN6-201ENST00000249806 TMEM233B4DJY2 109 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 SGSHP51688 502 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 KLF10Q13118 480 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 NAA25Q14CX7 972 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 CCDC6Q16204 474 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 FAM83EQ2M2I3 478 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 NET1Q7Z628 596 aaPredicted RBP21.79■■□□□ 1.08
CLN6-201ENST00000249806 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.79■■□□□ 1.08
CLN6-201ENST00000249806 RSRC1Q96IZ7 334 aaKnown RBP21.79■■□□□ 1.08
CLN6-201ENST00000249806 DNAJC1Q96KC8 554 aaKnown RBP21.79■■□□□ 1.08
CLN6-201ENST00000249806 CYP4F12Q9HCS2 524 aa21.79■■□□□ 1.08
CLN6-201ENST00000249806 SERPINB5P36952 375 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 TUFMP49411 452 aaKnown RBP21.78■■□□□ 1.08
CLN6-201ENST00000249806 FSCBQ5H9T9 825 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 TECRLQ5HYJ1 363 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 METTL21CQ5VZV1 264 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 ARMC3Q5W041 872 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 TMEM207Q6UWW9 146 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 TRIM67Q6ZTA4 783 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 OR13C4Q8NGS5 318 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 GIMAP7Q8NHV1 300 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 FEM1CQ96JP0 617 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 EXOC2Q96KP1 924 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 PRICKLE1Q96MT3 831 aaPredicted RBP21.78■■□□□ 1.08
CLN6-201ENST00000249806 DEFB118Q96PH6 123 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 LENG8Q96PV6 779 aaPredicted RBP21.78■■□□□ 1.08
CLN6-201ENST00000249806 HIPK3Q9H422 1215 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 CYP4F11Q9HBI6 524 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 H3BNC9 293 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 FKTNO75072 461 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 COX4I1P13073 169 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 HNRNPLP14866 589 aaKnown RBP eCLIP21.78■■□□□ 1.08
CLN6-201ENST00000249806 HMGA1P17096 107 aaKnown RBP21.78■■□□□ 1.08
CLN6-201ENST00000249806 RGRP47804 291 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 SLC11A2P49281 568 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 TAF11Q15544 211 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 HECTD3Q5T447 861 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 KIAA1841Q6NSI8 718 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 RPS27LQ71UM5 84 aaKnown RBP21.78■■□□□ 1.08
CLN6-201ENST00000249806 GABPB2Q8TAK5 448 aaPredicted RBP21.78■■□□□ 1.08
CLN6-201ENST00000249806 NRG4Q8WWG1 115 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 UBXN10Q96LJ8 280 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 CLSTN3Q9BQT9 956 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 RNF38Q9H0F5 515 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 MAGEH1Q9H213 219 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 LRRC42Q9Y546 428 aa21.78■■□□□ 1.08
CLN6-201ENST00000249806 CIB2O75838 187 aa21.77■■□□□ 1.08
CLN6-201ENST00000249806 SORBS2O94875 1100 aaKnown RBP21.77■■□□□ 1.08
CLN6-201ENST00000249806 EFEMP2O95967 443 aa21.77■■□□□ 1.08
CLN6-201ENST00000249806 GOT2P00505 430 aaKnown RBP21.77■■□□□ 1.08
CLN6-201ENST00000249806 SERPINF2P08697 491 aa21.77■■□□□ 1.08
CLN6-201ENST00000249806 LTA4HP09960 611 aaKnown RBP21.77■■□□□ 1.08
CLN6-201ENST00000249806 HLA-DPA1P20036 260 aa21.77■■□□□ 1.08
CLN6-201ENST00000249806 ATP5F1P24539 256 aaPredicted RBP21.77■■□□□ 1.08
CLN6-201ENST00000249806 PLK1P53350 603 aa21.77■■□□□ 1.08
CLN6-201ENST00000249806 PDCD2Q16342 344 aaPredicted RBP21.77■■□□□ 1.08
CLN6-201ENST00000249806 AGAP9Q5VTM2 703 aa21.77■■□□□ 1.08
CLN6-201ENST00000249806 C1orf146Q5VVC0 180 aa21.77■■□□□ 1.08
CLN6-201ENST00000249806 PIM3Q86V86 326 aa21.77■■□□□ 1.08
CLN6-201ENST00000249806 N4BP2L2Q92802 583 aaPredicted RBP21.77■■□□□ 1.08
CLN6-201ENST00000249806 CDK5RAP1Q96SZ6 601 aaKnown RBP21.77■■□□□ 1.08
CLN6-201ENST00000249806 NCKIPSDQ9NZQ3 722 aa21.77■■□□□ 1.08
CLN6-201ENST00000249806 STOML1Q9UBI4 398 aa21.77■■□□□ 1.08
CLN6-201ENST00000249806 FGF1P05230 155 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 SEMA3AQ14563 771 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 TMEM198Q66K66 360 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 KDM1BQ8NB78 822 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 CFAP61Q8NHU2 1237 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 WBP2Q969T9 261 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 SSX2IPQ9Y2D8 614 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 TRIM17Q9Y577 477 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 WASF2Q9Y6W5 498 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 CCDC162PA2VCL2 907 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 F8W8V4 182 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 TSPAN3O60637 253 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 STC2O76061 302 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 IRF1P10914 325 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms