RNA–Protein interactions for RNA: ENST00000242994.3

NEUROD4-201, Transcript of neuronal differentiation 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEUROD4, Length 3,953 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4-201ENST00000242994 AGRPO00253 132 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 HS6ST1O60243 411 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 BEST1O76090 585 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 ZNF132P52740 706 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 CCL23P55773 120 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 IL2P60568 153 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 SEMG2Q02383 582 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 UBE3AQ05086 875 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 CDK18Q07002 472 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 PLCL1Q15111 1095 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 CPSF6Q16630 551 aaKnown RBP eCLIP7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 TTLL9Q3SXZ7 439 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 FAM72AQ5TYM5 149 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 CDCA2Q69YH5 1023 aaPredicted RBP7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 ANO7Q6IWH7 933 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 FAM72DQ6L9T8 149 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 UTS2BQ765I0 119 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 FAM228AQ86W67 206 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 OSTM1Q86WC4 334 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 FAM72BQ86X60 149 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 PLD3Q8IV08 490 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 CENPLQ8N0S6 344 aaPredicted RBP7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 ATG16L2Q8NAA4 619 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 STAG3L4Q8TBR4 150 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 SLC7A6OSQ96CW6 309 aaPredicted RBP7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 PPM1MQ96MI6 270 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 ZNF778Q96MU6 729 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 SEPT3Q9UH03 358 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 GNEQ9Y223 722 aaKnown RBP7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 PCDHGC4Q9Y5F7 938 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 KIAA0100Q14667 2235 aaKnown RBP7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 TOGARAM1Q9Y4F4 1720 aa7.45□□□□□ -1.22
NEUROD4-201ENST00000242994 GOLGB1Q14789 3259 aaKnown RBP7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 A0A087X1B8 175 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 C16orf96A6NNT2 1141 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 MEIS3P2A8K0S8 358 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 E9PAM4 449 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 FZD9O00144 591 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 TRIM38O00635 465 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 MAGEC1O60732 1142 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 IPO13O94829 963 aaKnown RBP7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 TMCC1O94876 653 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 SIX3O95343 332 aaPredicted RBP7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 STAU1O95793 577 aaKnown RBP7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 UQCRBP14927 111 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 SLC1A2P43004 574 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 PSEN1P49768 467 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 CLCN5P51795 746 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 LSM3P62310 102 aaKnown RBP7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 MAPK11Q15759 364 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 AARS2Q5JTZ9 985 aaKnown RBP7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 HECTD2Q5U5R9 776 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 UGT3A1Q6NUS8 523 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 EFL1Q7Z2Z2 1120 aaKnown RBP7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 SPPL2CQ8IUH8 684 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 DHRSXQ8N5I4 330 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 PCSK9Q8NBP7 692 aaKnown RBP7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 TSPAN14Q8NG11 270 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 B4GALNT2Q8NHY0 566 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 LPGAT1Q92604 370 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 MED8Q96G25 268 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 DNAJC1Q96KC8 554 aaKnown RBP7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 TEKT5Q96M29 485 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 PANX3Q96QZ0 392 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 TUBGCP5Q96RT8 1024 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 MIPEPQ99797 713 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 OXCT2Q9BYC2 517 aaPredicted RBP7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 SLC39A8Q9C0K1 460 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 USP29Q9HBJ7 922 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 PSMD13Q9UNM6 376 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 PCDHB12Q9Y5F1 795 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 PTCH2Q9Y6C5 1203 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 A0A0J9YYE9 177 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 TMEM247A6NEH6 219 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 CFAP99D6REC4 459 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 AZIN1O14977 448 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 CD3EAPO15446 510 aaKnown RBP7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 NRP2O60462 931 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 RFPL1O75677 317 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 XRCC1P18887 633 aaPredicted RBP7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 ATP5C1P36542 298 aaKnown RBP7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 FLT3LGP49771 235 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 RAB27AP51159 221 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 THOP1P52888 689 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 ACTR3P61158 418 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 RPL38P63173 70 aaKnown RBP7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 TUSC3Q13454 348 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 BFSP2Q13515 415 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 AP5B1Q2VPB7 878 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 DPY19L2P1Q6NXN4 242 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 DCLRE1AQ6PJP8 1040 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 SPESP1Q6UW49 350 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 OR7D4Q8NG98 312 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 OR56A4Q8NGH8 313 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 OR9I1Q8NGQ6 314 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 ITFG1Q8TB96 612 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 NAT14Q8WUY8 206 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 ASB8Q9H765 288 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 NDUFA13Q9P0J0 144 aa7.44□□□□□ -1.22
NEUROD4-201ENST00000242994 SH3BP4Q9P0V3 963 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms