RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.44□□□□□ -0.9
TGFB3-201ENST00000238682 ARL14EPQ8N8R7 260 aaPredicted RBP9.44□□□□□ -0.9
TGFB3-201ENST00000238682 ADAM32Q8TC27 787 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 WFIKKN2Q8TEU8 576 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 OSCP1Q8WVF1 389 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 DYDC1Q8WWB3 177 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 FAM83CQ9BQN1 747 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 TRIM56Q9BRZ2 755 aaKnown RBP9.44□□□□□ -0.9
TGFB3-201ENST00000238682 TRIM31Q9BZY9 425 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 LMAN1LQ9HAT1 526 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 TRPC7Q9HCX4 862 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 ZNF69Q9UC07 566 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 SH3GLB1Q9Y371 365 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 EIF3HO15372 352 aaKnown RBP eCLIP9.44□□□□□ -0.9
TGFB3-201ENST00000238682 MSI1O43347 362 aaKnown RBP9.44□□□□□ -0.9
TGFB3-201ENST00000238682 OPHN1O60890 802 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 SYF2O95926 243 aaKnown RBP9.44□□□□□ -0.9
TGFB3-201ENST00000238682 FDFT1P37268 417 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 PTGIRP43119 386 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 MAGEA6P43360 314 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 IFI35P80217 286 aaPredicted RBP9.44□□□□□ -0.9
TGFB3-201ENST00000238682 OTUD4Q01804 1114 aaKnown RBP9.44□□□□□ -0.9
TGFB3-201ENST00000238682 ITKQ08881 620 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 RUNX3Q13761 415 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 MAP7D1Q3KQU3 841 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 FBXL22Q6P050 247 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 ZNF449Q6P9G9 518 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 NUDT18Q6ZVK8 323 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 TRMT11Q7Z4G4 463 aaKnown RBP9.44□□□□□ -0.9
TGFB3-201ENST00000238682 BBS5Q8N3I7 341 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 ACTL9Q8TC94 416 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 NETO1Q8TDF5 533 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 TRIM51Q9BSJ1 452 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 RPP25Q9BUL9 199 aaKnown RBP9.44□□□□□ -0.9
TGFB3-201ENST00000238682 YIPF3Q9GZM5 350 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 SLC40A1Q9NP59 571 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 EIF2B3Q9NR50 452 aaKnown RBP9.44□□□□□ -0.9
TGFB3-201ENST00000238682 FAM86C1Q9NVL1 165 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 GALNT8Q9NY28 637 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 ZNF212Q9UDV6 495 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 TSR3Q9UJK0 312 aaKnown RBP9.44□□□□□ -0.9
TGFB3-201ENST00000238682 DOCK8Q8NF50 2099 aa9.44□□□□□ -0.9
TGFB3-201ENST00000238682 NOTCH4Q99466 2003 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.43□□□□□ -0.9
TGFB3-201ENST00000238682 AGPSO00116 658 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 SMAD7O15105 426 aaKnown RBP9.43□□□□□ -0.9
TGFB3-201ENST00000238682 HOXC11O43248 304 aaPredicted RBP9.43□□□□□ -0.9
TGFB3-201ENST00000238682 SKAP2O75563 359 aaPredicted RBP9.43□□□□□ -0.9
TGFB3-201ENST00000238682 DCNP07585 359 aaKnown RBP9.43□□□□□ -0.9
TGFB3-201ENST00000238682 ID4P47928 161 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 ATXN1P54253 815 aaKnown RBP9.43□□□□□ -0.9
TGFB3-201ENST00000238682 CYP4F8P98187 520 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 SULT2A1Q06520 285 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 IL10RBQ08334 325 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 ZNF177Q13360 481 aaPredicted RBP9.43□□□□□ -0.9
TGFB3-201ENST00000238682 TXNDC8Q6A555 127 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 ITPRIPL1Q6GPH6 555 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 NADSYN1Q6IA69 706 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 TMEM92Q6UXU6 159 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 PPP1R21Q6ZMI0 780 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 KDM1BQ8NB78 822 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 NSMCE1Q8WV22 266 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 MAML1Q92585 1016 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 USP13Q92995 863 aaPredicted RBP9.43□□□□□ -0.9
TGFB3-201ENST00000238682 CAVIN3Q969G5 261 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 ERP44Q9BS26 406 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 KLC2Q9H0B6 622 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 CCDC68Q9H2F9 335 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 DPH5Q9H2P9 285 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 HEBP1Q9NRV9 189 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 DTLQ9NZJ0 730 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 NEU2Q9Y3R4 380 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 BRWD1Q9NSI6 2320 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 CD48P09326 243 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 GARSP41250 739 aaKnown RBP9.43□□□□□ -0.9
TGFB3-201ENST00000238682 SCNN1BP51168 640 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 CCNG1P51959 295 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 GRM2Q14416 872 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 CCDC153Q494R4 210 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 TM4SF20Q53R12 229 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 CCDC13Q8IYE1 715 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 LGI2Q8N0V4 545 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 GABPB2Q8TAK5 448 aaPredicted RBP9.43□□□□□ -0.9
TGFB3-201ENST00000238682 FIBINQ8TAL6 211 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 SH3RF2Q8TEC5 729 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 CHAC2Q8WUX2 184 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 RPRD1AQ96P16 312 aaPredicted RBP9.43□□□□□ -0.9
TGFB3-201ENST00000238682 OCSTAMPQ9BR26 566 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 SPON2Q9BUD6 331 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 ANLNQ9NQW6 1124 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 GPATCH2LQ9NWQ4 482 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 IL20Q9NYY1 176 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 NOP53Q9NZM5 478 aaKnown RBP9.43□□□□□ -0.9
TGFB3-201ENST00000238682 SEPT10Q9P0V9 454 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 CFAP97Q9P2B7 532 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 CTNNAL1Q9UBT7 734 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 EBF1Q9UH73 591 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 TTC28Q96AY4 2481 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 FANCMQ8IYD8 2048 aa9.43□□□□□ -0.9
TGFB3-201ENST00000238682 SZT2Q5T011 3432 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms