RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 POTEHQ6S545 545 aa7.47□□□□□ -1.21
MED28-201ENST00000237380 MARCH10Q8NA82 808 aaPredicted RBP7.47□□□□□ -1.21
MED28-201ENST00000237380 ENKURQ8TC29 256 aa7.47□□□□□ -1.21
MED28-201ENST00000237380 HASPINQ8TF76 798 aa7.47□□□□□ -1.21
MED28-201ENST00000237380 THRSPQ92748 146 aa7.47□□□□□ -1.21
MED28-201ENST00000237380 NACC2Q96BF6 587 aa7.47□□□□□ -1.21
MED28-201ENST00000237380 AP2M1Q96CW1 435 aa7.47□□□□□ -1.21
MED28-201ENST00000237380 NEDD4LQ96PU5 975 aa7.47□□□□□ -1.21
MED28-201ENST00000237380 WNT10BO00744 389 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 SLC25A14O95258 325 aaPredicted RBP7.46□□□□□ -1.21
MED28-201ENST00000237380 PDCD4Q53EL6 469 aaKnown RBP7.46□□□□□ -1.21
MED28-201ENST00000237380 PRR23BQ6ZRT6 265 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 SLC13A5Q86YT5 568 aaPredicted RBP7.46□□□□□ -1.21
MED28-201ENST00000237380 SIRT2Q8IXJ6 389 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 OR4C15Q8NGM1 316 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 PRCCQ92733 491 aaPredicted RBP7.46□□□□□ -1.21
MED28-201ENST00000237380 C9orf72Q96LT7 481 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 DEFB118Q96PH6 123 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 LDAHQ9H6V9 325 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 PDP2Q9P2J9 529 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 RSL1D1O76021 490 aaKnown RBP7.46□□□□□ -1.21
MED28-201ENST00000237380 YBX3P16989 372 aaKnown RBP eCLIP7.46□□□□□ -1.213e-7■□□□□ 9.4
MED28-201ENST00000237380 OXTRP30559 389 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 SARSP49591 514 aaKnown RBP7.46□□□□□ -1.21
MED28-201ENST00000237380 PLPP4Q5VZY2 271 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 TPGS1Q6ZTW0 290 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 EFCAB3Q8N7B9 438 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 DDHD1Q8NEL9 900 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 TPCN2Q8NHX9 752 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 C15orf40Q8WUR7 153 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 ZSWIM1Q9BR11 485 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 IL1RAPQ9NPH3 570 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 ABHD14A-ACY1A0A1B0GW23 586 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 PRR5-ARHGAP8B1AHC4 643 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 NR5A2O00482 541 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 CYP1A2P05177 515 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 PLEKP08567 350 aaPredicted RBP7.46□□□□□ -1.21
MED28-201ENST00000237380 FGFR3P22607 806 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 HSD17B7P56937 341 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 PLGLB1Q02325 96 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 NPAS4Q8IUM7 802 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 PSTKQ8IV42 348 aaKnown RBP7.46□□□□□ -1.21
MED28-201ENST00000237380 COL26A1Q96A83 441 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 PI4K2AQ9BTU6 479 aa7.46□□□□□ -1.21
MED28-201ENST00000237380 MAN2B1O00754 1011 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 GJA1P17302 382 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 MECP2P51608 486 aaKnown RBP7.46□□□□□ -1.22
MED28-201ENST00000237380 CXCL9Q07325 125 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 SEC23AQ15436 765 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 PARP4Q9UKK3 1724 aaKnown RBP7.46□□□□□ -1.22
MED28-201ENST00000237380 TECPR2O15040 1411 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 A0A0B4J269 797 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 SRRM3A6NNA2 597 aaPredicted RBP7.46□□□□□ -1.22
MED28-201ENST00000237380 LOC110117498-PIK3R3F6TDL0 507 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 BTN3A1O00481 513 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 FAM20BO75063 409 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 ENDOD1O94919 500 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 LGALS2P05162 132 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 PTPRAP18433 802 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 TUBB3Q13509 450 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 UBXN2BQ14CS0 331 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 RASGRP3Q8IV61 690 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 PIK3R3Q92569 461 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 SCGB3A2Q96PL1 93 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 GULP1Q9UBP9 304 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 UPB1Q9UBR1 384 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 NENFQ9UMX5 172 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 ASF1AQ9Y294 204 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 RECQL4O94761 1208 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 SERPINB5P36952 375 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 VHLP40337 213 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 MDH1P40925 334 aaKnown RBP7.46□□□□□ -1.22
MED28-201ENST00000237380 MRPS35P82673 323 aaKnown RBP7.46□□□□□ -1.22
MED28-201ENST00000237380 ZNF621Q6ZSS3 439 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 C12orf40Q86WS4 652 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 FAM81AQ8TBF8 368 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 GPER1Q99527 375 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 PAIP2BQ9ULR5 123 aaKnown RBP7.46□□□□□ -1.22
MED28-201ENST00000237380 PHLPP1O60346 1717 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 IRF6O14896 467 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 SMIM10L2AP0DMW4 78 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 SMIM10L2BP0DMW5 78 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 MAPK7Q13164 816 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 TAPT1Q6NXT6 567 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 CATSPERGQ6ZRH7 1159 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 MRPL41Q8IXM3 137 aaKnown RBP7.46□□□□□ -1.22
MED28-201ENST00000237380 MAGEE2Q8TD90 523 aaPredicted RBP7.46□□□□□ -1.22
MED28-201ENST00000237380 MYDGFQ969H8 173 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 BTN2A3PQ96KV6 586 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 GORASP1Q9BQQ3 440 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 WDR18Q9BV38 432 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 NUSAP1Q9BXS6 441 aaKnown RBP7.46□□□□□ -1.22
MED28-201ENST00000237380 WASF3Q9UPY6 502 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 TSPAN3O60637 253 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 TPGS2Q68CL5 300 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 UTP15Q8TED0 518 aaKnown RBP7.46□□□□□ -1.22
MED28-201ENST00000237380 PHF10Q8WUB8 498 aaKnown RBP7.46□□□□□ -1.22
MED28-201ENST00000237380 RORBQ92753 470 aa7.46□□□□□ -1.22
MED28-201ENST00000237380 GLIS2Q9BZE0 524 aaPredicted RBP7.46□□□□□ -1.22
MED28-201ENST00000237380 PORCNQ9H237 461 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms