RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 NFAT5O94916 1531 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 RPL35P42766 123 aaKnown RBP12.94□□□□□ -0.34
VAMP4-201ENST00000236192 APOFQ13790 326 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 MCPH1Q8NEM0 835 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 URGCPQ8TCY9 931 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 NKD2Q969F2 451 aaPredicted RBP12.94□□□□□ -0.34
VAMP4-201ENST00000236192 POP5Q969H6 163 aaKnown RBP12.94□□□□□ -0.34
VAMP4-201ENST00000236192 KCNS3Q9BQ31 491 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 SAE1Q9UBE0 346 aaPredicted RBP12.94□□□□□ -0.34
VAMP4-201ENST00000236192 TRAF6Q9Y4K3 522 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 LMTK3Q96Q04 1460 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 ARHGEF33A8MVX0 844 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 CAPN14A8MX76 684 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 SUPT3HB4E1H0 165 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 HOXB6P17509 224 aaKnown RBP12.94□□□□□ -0.34
VAMP4-201ENST00000236192 MGAT1P26572 445 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 PTPN7P35236 360 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 RPS8P62241 208 aaKnown RBP12.94□□□□□ -0.34
VAMP4-201ENST00000236192 CDKL1Q00532 357 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 GCNT1Q02742 428 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 ELP6Q0PNE2 266 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 DHRS4L2Q6PKH6 230 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 RIOX2Q8IUF8 465 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 TMC2Q8TDI7 906 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 ULK4Q96C45 1275 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 PCDHB18PQ96TA0 734 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 CHST12Q9NRB3 414 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 AAASQ9NRG9 546 aa12.94□□□□□ -0.34
VAMP4-201ENST00000236192 LEF1Q9UJU2 399 aaPredicted RBP12.94□□□□□ -0.34
VAMP4-201ENST00000236192 UNCXA6NJT0 531 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 TNNI3P19429 210 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 KDELR1P24390 212 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 CASP3P42574 277 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 PLA2G4EQ3MJ16 856 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 PLEKHG4Q58EX7 1191 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 CHSY3Q70JA7 882 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 SLC9A9Q8IVB4 645 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 PHTF2Q8N3S3 785 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 SVOPLQ8N434 492 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 FAM120BQ96EK7 910 aaKnown RBP12.93□□□□□ -0.34
VAMP4-201ENST00000236192 DIRAS2Q96HU8 199 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 TXNDC15Q96J42 360 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 GFM1Q96RP9 751 aaKnown RBP12.93□□□□□ -0.34
VAMP4-201ENST00000236192 ACE2Q9BYF1 805 aaPredicted RBP12.93□□□□□ -0.34
VAMP4-201ENST00000236192 SNX15Q9NRS6 342 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 TMEM5Q9Y2B1 443 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 GSTK1Q9Y2Q3 226 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 ROBO3Q96MS0 1386 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 ASTN2O75129 1339 aaPredicted RBP12.93□□□□□ -0.34
VAMP4-201ENST00000236192 F5H6K3 240 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 TULP3O75386 442 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 SNAP29O95721 258 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 CCNYL3P0C7X3 344 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 KLRC2P26717 231 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 JAK3P52333 1124 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 NANOGP8Q6NSW7 305 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 RHBDF2Q6PJF5 856 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 COMMD7Q86VX2 200 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 TIGD4Q8IY51 512 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 DNAJA4Q8WW22 397 aaPredicted RBP12.93□□□□□ -0.34
VAMP4-201ENST00000236192 ASB2Q96Q27 587 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 FERD3LQ96RJ6 166 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 MED10Q9BTT4 135 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 NPAP1Q9NZP6 1156 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 UBQLN2Q9UHD9 624 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 ENOPH1Q9UHY7 261 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 PCDHGA11Q9Y5H2 935 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 PTPRMP28827 1452 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 NEURL4Q96JN8 1562 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 A6NL46 340 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 H0YAE9 185 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 ALDH3B2P48448 385 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 QRICH1Q2TAL8 776 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 DESI1Q6ICB0 168 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 NAPEPLDQ6IQ20 393 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 RALGPS2Q86X27 583 aaPredicted RBP12.93□□□□□ -0.34
VAMP4-201ENST00000236192 CDYL2Q8N8U2 506 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 TAS1R2Q8TE23 839 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 SNAPC3Q92966 411 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 HSFY1Q96LI6 401 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 PCDHB16Q9NRJ7 776 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 IKZF3Q9UKT9 509 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 TLL2Q9Y6L7 1015 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 ZCCHC11Q5TAX3 1644 aaKnown RBP12.93□□□□□ -0.34
VAMP4-201ENST00000236192 MSI1O43347 362 aaKnown RBP12.93□□□□□ -0.34
VAMP4-201ENST00000236192 TCF4P15884 667 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 CYP3A5P20815 502 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 AKAP5P24588 427 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 OR3A3P47888 321 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 OSTNP61366 133 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 DEFA5Q01523 94 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 GALEQ14376 348 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 ATP13A4Q4VNC1 1196 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 AGAP6Q5VW22 663 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 UNC5AQ6ZN44 842 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 PIWIL4Q7Z3Z4 852 aaKnown RBP12.93□□□□□ -0.34
VAMP4-201ENST00000236192 ANKFN1Q8N957 763 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 OR6P1Q8NGX9 317 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 MYLPFQ96A32 169 aa12.93□□□□□ -0.34
VAMP4-201ENST00000236192 AGAP4Q96P64 663 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms