RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 SLC17A7Q9P2U7 560 aa8.26□□□□□ -1.09
APOB-201ENST00000233242 TRAF6Q9Y4K3 522 aa8.26□□□□□ -1.09
APOB-201ENST00000233242 PRRG1O14668 218 aa8.26□□□□□ -1.09
APOB-201ENST00000233242 PGRP06401 933 aa8.26□□□□□ -1.09
APOB-201ENST00000233242 IGFBP5P24593 272 aa8.26□□□□□ -1.09
APOB-201ENST00000233242 TUBP50607 506 aa8.26□□□□□ -1.09
APOB-201ENST00000233242 CDK18Q07002 472 aa8.26□□□□□ -1.09
APOB-201ENST00000233242 CLEC10AQ8IUN9 316 aa8.26□□□□□ -1.09
APOB-201ENST00000233242 SEMA4BQ9NPR2 832 aaPredicted RBP8.26□□□□□ -1.09
APOB-201ENST00000233242 GRIN2DO15399 1336 aa8.26□□□□□ -1.09
APOB-201ENST00000233242 NDUFS2O75306 463 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 TGFB3P10600 412 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 CXCR2P25025 360 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 RARRES1P49788 294 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 NKX1-1Q15270 411 aaPredicted RBP8.25□□□□□ -1.09
APOB-201ENST00000233242 KLHL24Q6TFL4 600 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 SMYD1Q8NB12 490 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 LNX1Q8TBB1 728 aaPredicted RBP8.25□□□□□ -1.09
APOB-201ENST00000233242 WNT8BQ93098 351 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 HSFY1Q96LI6 401 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 NOTOA8MTQ0 251 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 PAPSS1O43252 624 aaPredicted RBP8.25□□□□□ -1.09
APOB-201ENST00000233242 TPH1P17752 444 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 MVKQ03426 396 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 SMCO1Q147U7 214 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 PDIA6Q15084 440 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 CUZD1Q86UP6 607 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 SLITRK4Q8IW52 837 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 PM20D2Q8IYS1 436 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 BSNDQ8WZ55 320 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 TSPAN18Q96SJ8 248 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 ZNF607Q96SK3 696 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 GAKO14976 1311 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 MAP1BP46821 2468 aaKnown RBP8.25□□□□□ -1.09
APOB-201ENST00000233242 ZBTB14O43829 449 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 UGT1A9O60656 530 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 NFICP08651 508 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 UGT1A6P19224 532 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 UGT1A1P22309 533 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 UGT1A4P22310 534 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 PSMB4P28070 264 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 UGT1A3P35503 534 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 UGT1A5P35504 534 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 LYPLAL1Q5VWZ2 237 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 CPSF7Q8N684 471 aaKnown RBP8.25□□□□□ -1.09
APOB-201ENST00000233242 UGT1A7Q9HAW7 530 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 UGT1A10Q9HAW8 530 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 UGT1A8Q9HAW9 530 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 ABI2Q9NYB9 513 aaPredicted RBP8.25□□□□□ -1.09
APOB-201ENST00000233242 RCOR3Q9P2K3 495 aaPredicted RBP8.25□□□□□ -1.09
APOB-201ENST00000233242 ZMYM5Q9UJ78 669 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 FAM47E-STBD1D6RA91 191 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 ADAMDEC1O15204 470 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 ANGPTL1O95841 491 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 ANXA5P08758 320 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 ATF4P18848 351 aaPredicted RBP8.25□□□□□ -1.09
APOB-201ENST00000233242 FBXO43Q4G163 708 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 MCUBQ9NWR8 336 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 SCNN1BP51168 640 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 OR52K1Q8NGK4 314 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 SLC7A5P2Q9GIP4 190 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 STOX2Q9P2F5 926 aaPredicted RBP8.25□□□□□ -1.09
APOB-201ENST00000233242 VPS28Q9UK41 221 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 PCDHGC3Q9UN70 934 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 CD163L1Q9NR16 1453 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 ZNF879B4DU55 563 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 HPS6Q86YV9 775 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 SELENOMQ8WWX9 145 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 EBF3Q9H4W6 596 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 ANKRA2Q9H9E1 313 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 ZNF232Q9UNY5 417 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 MRPS7Q9Y2R9 242 aaKnown RBP8.25□□□□□ -1.09
APOB-201ENST00000233242 PENKP01210 267 aaPredicted RBP8.25□□□□□ -1.09
APOB-201ENST00000233242 YES1P07947 543 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 ZSCAN5DPP0CG00 497 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 MOGQ16653 247 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 STXBP5Q5T5C0 1151 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 RNF157Q96PX1 679 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 CIB1Q99828 191 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 SETD4Q9NVD3 440 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 ARL15Q9NXU5 204 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 PSME2Q9UL46 239 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 E9PCH4 1651 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 IQGAP1P46940 1657 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 SLC30A4O14863 429 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 FADS2O95864 444 aaKnown RBP8.25□□□□□ -1.09
APOB-201ENST00000233242 RHOCP08134 193 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 ATXN8OSP0DMR3 200 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 MAPK8P45983 427 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 EIF5AP63241 154 aaKnown RBP8.25□□□□□ -1.09
APOB-201ENST00000233242 ZNF829Q3KNS6 432 aaPredicted RBP8.25□□□□□ -1.09
APOB-201ENST00000233242 HYIQ5T013 277 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 ZNF420Q8TAQ5 688 aaPredicted RBP8.25□□□□□ -1.09
APOB-201ENST00000233242 SLC22A4Q9H015 551 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 NXF3Q9H4D5 531 aaKnown RBP8.25□□□□□ -1.09
APOB-201ENST00000233242 C12orf4Q9NQ89 552 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 SEPHS1P49903 392 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 OR52E6Q96RD3 313 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 DSN1Q9H410 356 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 ENTPD4Q9Y227 616 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms