RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 MTA2O94776 668 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 POLR2EP19388 210 aaKnown RBP13.44□□□□□ -0.26
NEK4-201ENST00000233027 ATP5C1P36542 298 aaKnown RBP13.44□□□□□ -0.26
NEK4-201ENST00000233027 EPS8Q12929 822 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 BNIP2Q12982 314 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 TAB1Q15750 504 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 ARRDC4Q8NCT1 418 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 HDAC10Q969S8 669 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 LINGO1Q96FE5 620 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 B3GNT5Q9BYG0 378 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 CRISPLD1Q9H336 500 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 TRIM39Q9HCM9 518 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 ZNF222Q9UK12 451 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 SLC27A5Q9Y2P5 690 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 POLR1DQ9Y2S0 133 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 NPEPPSL1A6NEC2 478 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 CCDC182A6NF36 153 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 AZIN1O14977 448 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 ULK1O75385 1050 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 MTA1Q13330 715 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 TIMM50Q3ZCQ8 353 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 MZT2AQ6P582 158 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 ECHDC2Q86YB7 292 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 RDH11Q8TC12 318 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 MYDGFQ969H8 173 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 PRDM16Q9HAZ2 1276 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 U3KQV3 271 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 CLUHO75153 1309 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 G3V2T6 193 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 OR6A2O95222 327 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 SMIM10L2AP0DMW4 78 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 SMIM10L2BP0DMW5 78 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 HOXB8P17481 243 aaPredicted RBP13.44□□□□□ -0.26
NEK4-201ENST00000233027 HNF4AP41235 474 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 ZNF135P52742 658 aaPredicted RBP13.44□□□□□ -0.26
NEK4-201ENST00000233027 ABRQ12979 859 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 DLG2Q15700 870 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 XKR6Q5GH73 641 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 PPP3R2Q96LZ3 170 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 NLNQ9BYT8 704 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 ROR2Q01974 943 aaKnown RBP13.44□□□□□ -0.26
NEK4-201ENST00000233027 VWA5B1Q5TIE3 1220 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 MZT2BQ6NZ67 158 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 SPPL2CQ8IUH8 684 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 NDRG1Q92597 394 aaKnown RBP13.44□□□□□ -0.26
NEK4-201ENST00000233027 MCRS1Q96EZ8 462 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 PCDH18Q9HCL0 1135 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 SAMHD1Q9Y3Z3 626 aaKnown RBP13.44□□□□□ -0.26
NEK4-201ENST00000233027 ARHGEF28Q8N1W1 1705 aaKnown RBP13.44□□□□□ -0.26
NEK4-201ENST00000233027 CHURC1-FNTBB4DL54 471 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 ZACNQ401N2 412 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 GALNT5Q7Z7M9 940 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 HOMEZQ8IX15 550 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 IQCKQ8N0W5 287 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 C18orf25Q96B23 403 aaPredicted RBP13.44□□□□□ -0.26
NEK4-201ENST00000233027 P2RY11Q96G91 374 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 FAM163AQ96GL9 167 aaPredicted RBP13.44□□□□□ -0.26
NEK4-201ENST00000233027 CRNNQ9UBG3 495 aaPredicted RBP13.44□□□□□ -0.26
NEK4-201ENST00000233027 AP3M1Q9Y2T2 418 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 AK5Q9Y6K8 562 aa13.44□□□□□ -0.26
NEK4-201ENST00000233027 SF3B1O75533 1304 aaKnown RBP eCLIP13.44□□□□□ -0.264e-7■■■■■ 133.7
NEK4-201ENST00000233027 ADSLP30566 484 aaPredicted RBP13.43□□□□□ -0.26
NEK4-201ENST00000233027 TTKP33981 857 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 TTPAP49638 278 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 VGLL4Q14135 290 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 BTG3Q14201 252 aaPredicted RBP13.43□□□□□ -0.26
NEK4-201ENST00000233027 AAGABQ6PD74 315 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 CUZD1Q86UP6 607 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 SFRP1Q8N474 314 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 FAM47BQ8NA70 645 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 GIPC3Q8TF64 312 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 KLHL5Q96PQ7 755 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 DMTF1Q9Y222 760 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 KIDINS220Q9ULH0 1771 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 PPLO60437 1756 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 CAPN8A6NHC0 703 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 BMP10O95393 424 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 AKR1A1P14550 325 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 INSCQ1MX18 579 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 CLHC1Q8NHS4 586 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 HSFY1Q96LI6 401 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 MFSD14AQ96MC6 490 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 KIFC1Q9BW19 673 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 TBC1D30Q9Y2I9 924 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 PLLPQ9Y342 182 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 FADS2O95864 444 aaKnown RBP13.43□□□□□ -0.26
NEK4-201ENST00000233027 RPN2P04844 631 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 RPLP2P05387 115 aaKnown RBP13.43□□□□□ -0.26
NEK4-201ENST00000233027 WARSP23381 471 aaKnown RBP13.43□□□□□ -0.26
NEK4-201ENST00000233027 SLC26A3P40879 764 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 CPSF6Q16630 551 aaKnown RBP eCLIP13.43□□□□□ -0.26
NEK4-201ENST00000233027 BMT2Q1RMZ1 405 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 FBXL19Q6PCT2 694 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 CATSPERGQ6ZRH7 1159 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 SALL4Q9UJQ4 1053 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 DNMT3LQ9UJW3 386 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 FBXO10Q9UK96 956 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 BCL9O00512 1426 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 A0A0J9YYE9 177 aa13.43□□□□□ -0.26
NEK4-201ENST00000233027 H3BMM5 538 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms