RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 CYP4F2P78329 520 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.54■□□□□ 0.56
CLIP2-201ENST00000223398 SLC4A11Q8NBS3 891 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 CDRT15Q96T59 188 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 PHACTR1Q9C0D0 580 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 NMUR1Q9HB89 426 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 LRATO95237 230 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 APTXQ7Z2E3 356 aaKnown RBP18.54■□□□□ 0.56
CLIP2-201ENST00000223398 TAC4Q86UU9 113 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 ZNF384Q8TF68 577 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 BTBD9Q96Q07 612 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 GLYATL1P3A0A0U1RQE8 302 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 CDK14O94921 469 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 CES1P23141 567 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 FASP25445 335 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 PARP15Q460N3 678 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 CASP12Q6UXS9 341 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 BNIPLQ7Z465 357 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 PAWRQ96IZ0 340 aaKnown RBP18.54■□□□□ 0.56
CLIP2-201ENST00000223398 XPNPEP1Q9NQW7 623 aa18.54■□□□□ 0.56
CLIP2-201ENST00000223398 ATP5F1P24539 256 aaPredicted RBP18.53■□□□□ 0.56
CLIP2-201ENST00000223398 RAD23AP54725 363 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 DSC2Q02487 901 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 BIKQ13323 160 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 FAAH2Q6GMR7 532 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 CCDC185Q8N715 623 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 DLGAP2Q9P1A6 1054 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 C9IYK1 514 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 ITPKAP23677 461 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 AIF1P55008 147 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 GJA9P57773 515 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 GBE1Q04446 702 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 SEMA5AQ13591 1074 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 NCF4Q15080 339 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 GPAT3Q53EU6 434 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 UBE2R2Q712K3 238 aaPredicted RBP18.53■□□□□ 0.56
CLIP2-201ENST00000223398 HERVK_113Q902F9 699 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 C1orf50Q9BV19 199 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 SLC9A8Q9Y2E8 581 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 CAB39Q9Y376 341 aaPredicted RBP18.53■□□□□ 0.56
CLIP2-201ENST00000223398 A0A1W2PRU2 124 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 FFAR2O15552 330 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 ITGA2BP08514 1039 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 HNRNPLP14866 589 aaKnown RBP eCLIP18.53■□□□□ 0.56
CLIP2-201ENST00000223398 FRG1Q14331 258 aaKnown RBP18.53■□□□□ 0.56
CLIP2-201ENST00000223398 STARD8Q92502 1023 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 PCYOX1Q9UHG3 505 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 PCDHGC4Q9Y5F7 938 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 LRRC19Q9H756 370 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 RXFP1Q9HBX9 757 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 ATAD3AQ9NVI7 634 aa18.53■□□□□ 0.56
CLIP2-201ENST00000223398 CAP1Q01518 475 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 ARHGAP1Q07960 439 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 PPP1R15BQ5SWA1 713 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 PRMT9Q6P2P2 845 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 ECHDC2Q86YB7 292 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 FBXO30Q8TB52 745 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 GPN3Q9UHW5 284 aaPredicted RBP18.52■□□□□ 0.56
CLIP2-201ENST00000223398 KCNE2Q9Y6J6 123 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 URADA6NGE7 173 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 NRP1O14786 923 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 SLC31A1O15431 190 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 KCNH1O95259 989 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 ALADP13716 330 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 TIGD5Q53EQ6 642 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 AENQ8WTP8 325 aaKnown RBP18.52■□□□□ 0.56
CLIP2-201ENST00000223398 KLK6Q92876 244 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 CENPTQ96BT3 561 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 ARHGEF4Q9NR80 690 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 XPR1Q9UBH6 696 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 LRPAP1P30533 357 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 SF1Q15637 639 aaKnown RBP18.52■□□□□ 0.56
CLIP2-201ENST00000223398 LRRC73Q5JTD7 316 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 CYB5D1Q6P9G0 228 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 ADAMTSL2Q86TH1 951 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 RIBC2Q9H4K1 309 aa18.52■□□□□ 0.56
CLIP2-201ENST00000223398 OR2AG2A6NM03 316 aa18.52■□□□□ 0.55
CLIP2-201ENST00000223398 CCL22O00626 93 aa18.52■□□□□ 0.55
CLIP2-201ENST00000223398 HLA-DQA2P01906 255 aa18.52■□□□□ 0.55
CLIP2-201ENST00000223398 DGKGP49619 791 aa18.52■□□□□ 0.55
CLIP2-201ENST00000223398 CXCR3P49682 368 aa18.52■□□□□ 0.55
CLIP2-201ENST00000223398 TAF5Q15542 800 aa18.52■□□□□ 0.55
CLIP2-201ENST00000223398 MACC1Q6ZN28 852 aa18.52■□□□□ 0.55
CLIP2-201ENST00000223398 CMC1Q7Z7K0 106 aa18.52■□□□□ 0.55
CLIP2-201ENST00000223398 STK32CQ86UX6 486 aa18.52■□□□□ 0.55
CLIP2-201ENST00000223398 TMEM192Q8IY95 271 aa18.52■□□□□ 0.55
CLIP2-201ENST00000223398 ST13P5Q8NFI4 369 aaPredicted RBP18.52■□□□□ 0.55
CLIP2-201ENST00000223398 SCAMP5Q8TAC9 235 aa18.52■□□□□ 0.55
CLIP2-201ENST00000223398 ALG3Q92685 438 aa18.52■□□□□ 0.55
CLIP2-201ENST00000223398 GLMNQ92990 594 aa18.52■□□□□ 0.55
CLIP2-201ENST00000223398 FEM1CQ96JP0 617 aa18.52■□□□□ 0.55
CLIP2-201ENST00000223398 CBX6O95503 412 aa18.52■□□□□ 0.55
CLIP2-201ENST00000223398 GRM3Q14832 879 aa18.52■□□□□ 0.55
CLIP2-201ENST00000223398 TEX44Q53QW1 395 aa18.52■□□□□ 0.55
CLIP2-201ENST00000223398 GPRIN3Q6ZVF9 776 aa18.52■□□□□ 0.55
CLIP2-201ENST00000223398 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.52■□□□□ 0.55
CLIP2-201ENST00000223398 FAM20CQ8IXL6 584 aa18.52■□□□□ 0.55
CLIP2-201ENST00000223398 EID3Q8N140 333 aa18.52■□□□□ 0.55
CLIP2-201ENST00000223398 ITFG1Q8TB96 612 aa18.52■□□□□ 0.55
CLIP2-201ENST00000223398 SLC25A23Q9BV35 468 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms