RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 IYDQ6PHW0 289 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 PAOXQ6QHF9 649 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 KDELC1Q6UW63 502 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 C17orf99Q6UX52 265 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 ADGRG6Q86SQ4 1221 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 LZTR1Q8N653 840 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 KLHDC9Q8NEP7 349 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 OR13J1Q8NGT2 312 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 SPPL2BQ8TCT7 592 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 TRIB2Q92519 343 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 ATP6V1E2Q96A05 226 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 CNDP1Q96KN2 507 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 VCX3BQ9H321 246 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 CLIC5Q9NZA1 410 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 APPL1Q9UKG1 709 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 PSMD13Q9UNM6 376 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 VWA7Q9Y334 891 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 LAMA2P24043 3122 aaKnown RBP14.71□□□□□ -0.05
CNOT3-201ENST00000221232 E7ENX8 843 aa14.71□□□□□ -0.06
CNOT3-201ENST00000221232 M0QZQ0 153 aa14.71□□□□□ -0.06
CNOT3-201ENST00000221232 SIX3O95343 332 aaPredicted RBP14.71□□□□□ -0.06
CNOT3-201ENST00000221232 COL6A2P12110 1019 aa14.71□□□□□ -0.06
CNOT3-201ENST00000221232 ZNF135P52742 658 aaPredicted RBP14.71□□□□□ -0.06
CNOT3-201ENST00000221232 POU4F1Q01851 419 aa14.71□□□□□ -0.06
CNOT3-201ENST00000221232 MGAT3Q09327 533 aa14.71□□□□□ -0.06
CNOT3-201ENST00000221232 PTK2BQ14289 1009 aa14.71□□□□□ -0.06
CNOT3-201ENST00000221232 C6orf52Q5T4I8 152 aa14.71□□□□□ -0.06
CNOT3-201ENST00000221232 AGAP9Q5VTM2 703 aa14.71□□□□□ -0.06
CNOT3-201ENST00000221232 SMIM14Q96QK8 99 aa14.71□□□□□ -0.06
CNOT3-201ENST00000221232 SPC25Q9HBM1 224 aa14.71□□□□□ -0.06
CNOT3-201ENST00000221232 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.71□□□□□ -0.06
CNOT3-201ENST00000221232 HEATR9A2RTY3 570 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 UBFD1O14562 309 aaKnown RBP14.7□□□□□ -0.06
CNOT3-201ENST00000221232 IPO13O94829 963 aaKnown RBP14.7□□□□□ -0.06
CNOT3-201ENST00000221232 PEX11BO96011 259 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 CYP11A1P05108 521 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 LTA4HP09960 611 aaKnown RBP14.7□□□□□ -0.06
CNOT3-201ENST00000221232 PMLP29590 882 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 CYP2C18P33260 490 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 RENBPP51606 427 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 NRF1Q16656 503 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 TECRLQ5HYJ1 363 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 MS4A13Q5J8X5 152 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 SIRPB2Q5JXA9 342 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 KIAA0930Q6ICG6 404 aaPredicted RBP14.7□□□□□ -0.06
CNOT3-201ENST00000221232 SATL1Q86VE3 508 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 PGBD5Q8N414 524 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 PIP4K2CQ8TBX8 421 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 RPRD1AQ96P16 312 aaPredicted RBP14.7□□□□□ -0.06
CNOT3-201ENST00000221232 CYP2S1Q96SQ9 504 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 MRPL1Q9BYD6 325 aaKnown RBP14.7□□□□□ -0.06
CNOT3-201ENST00000221232 SLC25A51Q9H1U9 297 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 DSEQ9UL01 958 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 Q9Y3F1 56 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 A0A087X1B8 175 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 UBDO15205 165 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 ATP6V1B1P15313 513 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 CRHR2Q13324 411 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 HNRNPDQ14103 355 aaKnown RBP14.7□□□□□ -0.06
CNOT3-201ENST00000221232 FASTKQ14296 549 aaKnown RBP14.7□□□□□ -0.06
CNOT3-201ENST00000221232 C10orf120Q5SQS8 335 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 FBXL22Q6P050 247 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 PIWIL4Q7Z3Z4 852 aaKnown RBP14.7□□□□□ -0.06
CNOT3-201ENST00000221232 PGAM4Q8N0Y7 254 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 CPSF7Q8N684 471 aaKnown RBP14.7□□□□□ -0.06
CNOT3-201ENST00000221232 SUSD3Q96L08 255 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 ZNF385DQ9H6B1 395 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 TBC1D13Q9NVG8 400 aa14.7□□□□□ -0.06
CNOT3-201ENST00000221232 PRPF19Q9UMS4 504 aaKnown RBP14.7□□□□□ -0.06
CNOT3-201ENST00000221232 SLCO1B7G3V0H7 640 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 NELFEP18615 380 aaKnown RBP14.69□□□□□ -0.06
CNOT3-201ENST00000221232 PSME3P61289 254 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 MAPRE1Q15691 268 aaKnown RBP14.69□□□□□ -0.06
CNOT3-201ENST00000221232 KLC3Q6P597 504 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 ST13P4Q8IZP2 240 aaPredicted RBP14.69□□□□□ -0.06
CNOT3-201ENST00000221232 OR13C4Q8NGS5 318 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 HMGCLL1Q8TB92 370 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 SERPINB11Q96P15 392 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 SEMA3CQ99985 751 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 TRIM8Q9BZR9 551 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 UBAP1Q9NZ09 502 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 A0A0U1RQS6 177 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 SLC12A8A0AV02 714 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 TRPC5OSA6NMA1 111 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 PEX1O43933 1283 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 MMP2P08253 660 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 DNAJB2P25686 324 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 GSTT1P30711 240 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 PBX3P40426 434 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 INHBEP58166 350 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 IL23RQ5VWK5 629 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 RTN4RL1Q86UN2 441 aaPredicted RBP14.69□□□□□ -0.06
CNOT3-201ENST00000221232 CILP2Q8IUL8 1156 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 NUP93Q8N1F7 819 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 IMP4Q96G21 291 aaKnown RBP14.69□□□□□ -0.06
CNOT3-201ENST00000221232 DNAJC1Q96KC8 554 aaKnown RBP14.69□□□□□ -0.06
CNOT3-201ENST00000221232 EXOC2Q96KP1 924 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 C3orf30Q96M34 536 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 ZIC5Q96T25 663 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 CCDC28BQ9BUN5 200 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms