RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 TXNL4AP83876 142 aaKnown RBP13.39□□□□□ -0.27
SRP54-201ENST00000216774 SAMD4BQ5PRF9 694 aaKnown RBP13.39□□□□□ -0.27
SRP54-201ENST00000216774 RBM20Q5T481 1227 aaKnown RBP13.39□□□□□ -0.27
SRP54-201ENST00000216774 ARTNQ5T4W7 220 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 OLFML2BQ68BL8 750 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 C8orf82Q6P1X6 216 aaPredicted RBP13.39□□□□□ -0.27
SRP54-201ENST00000216774 IYDQ6PHW0 289 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 SMOC2Q9H3U7 446 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 CYP4F12Q9HCS2 524 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 ABCC13Q9NSE7 274 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 RNF181Q9P0P0 153 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 FNIP2Q9P278 1114 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 ATXN10Q9UBB4 475 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 IPO11Q9UI26 975 aaKnown RBP13.39□□□□□ -0.27
SRP54-201ENST00000216774 AURKAO14965 403 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 GPC4O75487 556 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 PAPSS2O95340 614 aaPredicted RBP13.38□□□□□ -0.27
SRP54-201ENST00000216774 CCDC166P0CW27 439 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 WNT3AP56704 352 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 ILF2Q12905 390 aaKnown RBP13.38□□□□□ -0.27
SRP54-201ENST00000216774 UPP1Q16831 310 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 FAM110CQ1W6H9 321 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 MYLK3Q32MK0 819 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 TIGD5Q53EQ6 642 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 PRAMEF19Q5SWL8 479 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 TAF2Q6P1X5 1199 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 PAOXQ6QHF9 649 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 KDELC1Q6UW63 502 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 RTL3Q8N8U3 475 aaKnown RBP13.38□□□□□ -0.27
SRP54-201ENST00000216774 ZFP28Q8NHY6 868 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 BRI3BPQ8WY22 251 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 PBXIP1Q96AQ6 731 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 FCRL2Q96LA5 508 aaPredicted RBP13.38□□□□□ -0.27
SRP54-201ENST00000216774 HAUS8Q9BT25 410 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 EFHD1Q9BUP0 239 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 SENP6Q9GZR1 1112 aaPredicted RBP13.38□□□□□ -0.27
SRP54-201ENST00000216774 SLC25A51Q9H1U9 297 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 ATP13A1Q9HD20 1204 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 TNFRSF12AQ9NP84 129 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 OSER1Q9NX31 292 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 CCDC167Q9P0B6 97 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 TMEM181Q9P2C4 612 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 TMCO1Q9UM00 188 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 MYLKQ15746 1914 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 PRORSD1PA6NEY8 169 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 ARL5CA6NH57 179 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 MRASO14807 208 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 MYL3P08590 195 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 IMPDH1P20839 514 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 AFF1P51825 1210 aaKnown RBP13.38□□□□□ -0.27
SRP54-201ENST00000216774 NRG1Q02297 640 aaPredicted RBP13.38□□□□□ -0.27
SRP54-201ENST00000216774 IKBKEQ14164 716 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 METTL23Q86XA0 190 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 LPGAT1Q92604 370 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 ROPN1LQ96C74 230 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 L3HYPDHQ96EM0 354 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 PCDHAC1Q9H158 963 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 CROTQ9UKG9 612 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 GIT1Q9Y2X7 761 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 FIS1Q9Y3D6 152 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 TRAF6Q9Y4K3 522 aa13.38□□□□□ -0.27
SRP54-201ENST00000216774 NRP2O60462 931 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 SRP72O76094 671 aaKnown RBP13.37□□□□□ -0.27
SRP54-201ENST00000216774 TMCC1O94876 653 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 CYP11A1P05108 521 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 SPATA31D3P0C874 917 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 HSPA8P11142 646 aaKnown RBP13.37□□□□□ -0.27
SRP54-201ENST00000216774 SERPINH1P50454 418 aaKnown RBP13.37□□□□□ -0.27
SRP54-201ENST00000216774 PPP1R3AQ16821 1122 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 PABPC1LQ4VXU2 614 aaKnown RBP13.37□□□□□ -0.27
SRP54-201ENST00000216774 HECTD2Q5U5R9 776 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 ZNF280DQ6N043 979 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 SPATA31D4Q6ZUB0 917 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 RNF135Q8IUD6 432 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 FATE1Q969F0 183 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 LENG1Q96BZ8 264 aaPredicted RBP13.37□□□□□ -0.27
SRP54-201ENST00000216774 PKMYT1Q99640 499 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 ATXN3LQ9H3M9 355 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 GSTO2Q9H4Y5 243 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 COQ10BQ9H8M1 238 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 MIOSQ9NXC5 875 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 ARHGEF37A1IGU5 675 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 C7orf72A4D263 438 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 CCDC160A6NGH7 325 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 CASTOR2A6NHX0 329 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 WASH4PA8MWX3 477 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 M0QZ92 97 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 SLC7A4O43246 635 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 WISP3O95389 354 aaPredicted RBP13.37□□□□□ -0.27
SRP54-201ENST00000216774 ZNF865P0CJ78 1059 aaPredicted RBP13.37□□□□□ -0.27
SRP54-201ENST00000216774 EPHX2P34913 555 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 MRPS6P82932 125 aaKnown RBP13.37□□□□□ -0.27
SRP54-201ENST00000216774 NFKB2Q00653 900 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 MAPRE1Q15691 268 aaKnown RBP13.37□□□□□ -0.27
SRP54-201ENST00000216774 ZNF789Q5FWF6 425 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 C6orf10Q5SRN2 563 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 LARP4Q71RC2 724 aaKnown RBP eCLIP13.37□□□□□ -0.27
SRP54-201ENST00000216774 CARM1Q86X55 608 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 CILP2Q8IUL8 1156 aa13.37□□□□□ -0.27
SRP54-201ENST00000216774 HERC6Q8IVU3 1022 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms