RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 MPP1Q00013 466 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 KLF1Q13351 362 aaPredicted RBP13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 KIAA0408Q6ZU52 694 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 VGLL2Q8N8G2 317 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 OR52J3Q8NH60 311 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 KREMEN1Q96MU8 473 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 UXTQ9UBK9 157 aaPredicted RBP13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 PCYOX1Q9UHG3 505 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 SALL4Q9UJQ4 1053 aa13.68□□□□□ -0.22
TGFBR3-201ENST00000212355 AHCYL1O43865 530 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 PPP1R11O60927 126 aaPredicted RBP13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 CST3P01034 146 aaPredicted RBP13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 ATXN1P54253 815 aaKnown RBP13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 SQLEQ14534 574 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 RFWD3Q6PCD5 774 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 VCPIP1Q96JH7 1222 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 ASB7Q9H672 318 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 CERS4Q9HA82 394 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 OR10H3O60404 316 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 NCK1P16333 377 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 NAPRTQ6XQN6 538 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 ART5Q96L15 291 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 ACE2Q9BYF1 805 aaPredicted RBP13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 TPK1Q9H3S4 243 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 E7ENQ6 273 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 IRGCQ6NXR0 463 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 STAG3L4Q8TBR4 150 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 CXorf40AQ8TE69 158 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 CIB1Q99828 191 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 PRKD2Q9BZL6 878 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 NDUFA13Q9P0J0 144 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 PRG2P13727 222 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 CTSEP14091 401 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 HDCP19113 662 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 SLC7A2P52569 658 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 ANKRD22Q5VYY1 191 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 RNF43Q68DV7 783 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 COLGALT2Q8IYK4 626 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 ESAMQ96AP7 390 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 BRD9Q9H8M2 597 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 ARHGAP28Q9P2N2 729 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 GNPTGQ9UJJ9 305 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 CENPXA8MT69 81 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 CD3EAPO15446 510 aaKnown RBP13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 RTN3O95197 1032 aaPredicted RBP13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 CYP1A1P04798 512 aaPredicted RBP13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 NR2F1P10589 423 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 ALDH4A1P30038 563 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 TGM3Q08188 693 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 TRPM4Q8TD43 1214 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 FAR1Q8WVX9 515 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 OR52E6Q96RD3 313 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 PANX1Q96RD7 426 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 BCAS3Q9H6U6 928 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 TMEM165Q9HC07 324 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 TMEM138Q9NPI0 162 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 PTGFRNQ9P2B2 879 aa13.67□□□□□ -0.22
TGFBR3-201ENST00000212355 RGSL1A5PLK6 1076 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 KCNU1A8MYU2 1149 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 NEDD8-MDP1E9PL57 170 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 TGFB1I1O43294 461 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 SSNA1O43805 119 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 SEC24AO95486 1093 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 CYP2A6P11509 494 aaPredicted RBP13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 SERPINA4P29622 427 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 ZPBP2Q6X784 338 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 BSNDQ8WZ55 320 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 RNF208Q9H0X6 261 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 ST3GAL5Q9UNP4 418 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 PCDHB9Q9Y5E1 797 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 AP4B1Q9Y6B7 739 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 PDK4Q16654 411 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 CDC73Q6P1J9 531 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 ZFP1Q6P2D0 407 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 ADHFE1Q8IWW8 467 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 HPS1Q92902 700 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 SLC4A9Q96Q91 983 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 KCTD15Q96SI1 283 aaPredicted RBP13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 CDH19Q9H159 772 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 LRMDAQ9H2I8 198 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 KLHL31Q9H511 634 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 DNMT3LQ9UJW3 386 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 FBXL21Q9UKT6 434 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 SAMHD1Q9Y3Z3 626 aaKnown RBP13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 ADAMTS13Q76LX8 1427 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 CAPN8A6NHC0 703 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 ITGAVP06756 1048 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 ANXA5P08758 320 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 AKR1A1P14550 325 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 ITGB5P18084 799 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 RHBDL3P58872 404 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 BIKQ13323 160 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 FAM187BQ17R55 369 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 ZNF549Q6P9A3 640 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 PPM1MQ96MI6 270 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 ZYG11BQ9C0D3 744 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 NCANO14594 1321 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 A0A087WXM4 84 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 ABHD14A-ACY1A0A1B0GW23 586 aa13.66□□□□□ -0.22
TGFBR3-201ENST00000212355 PTPN3P26045 913 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms