RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 WARSP23381 471 aaKnown RBP14.11□□□□□ -0.15
USH1C-201ENST00000005226 SCAPQ12770 1279 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 UGP2Q16851 508 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 VPS26BQ4G0F5 336 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 FBXO48Q5FWF7 155 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 TECRLQ5HYJ1 363 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 UBXN11Q5T124 520 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 PIM3Q86V86 326 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 ERI1Q8IV48 349 aaKnown RBP14.11□□□□□ -0.15
USH1C-201ENST00000005226 SLC9A7Q96T83 725 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 MUC3BQ9H195 1237 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 GLOD4Q9HC38 313 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 SMOXQ9NWM0 555 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 NSMCE4AQ9NXX6 385 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 TCAF1Q9Y4C2 921 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 OR51F1A6NGY5 319 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 MTSS1O43312 755 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 IPO13O94829 963 aaKnown RBP14.11□□□□□ -0.15
USH1C-201ENST00000005226 SNAI1O95863 264 aaPredicted RBP14.11□□□□□ -0.15
USH1C-201ENST00000005226 CXCR3P49682 368 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 MAPK10P53779 464 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 TMEM207Q6UWW9 146 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 CHST15Q7LFX5 561 aaPredicted RBP14.11□□□□□ -0.15
USH1C-201ENST00000005226 LIMS2Q7Z4I7 341 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 LINC00523Q86TU6 105 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 RANBP9Q96S59 729 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 SLC39A8Q9C0K1 460 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 MEAF6Q9HAF1 191 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 PNPLA3Q9NST1 481 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 RBM22Q9NW64 420 aaKnown RBP eCLIP14.11□□□□□ -0.15
USH1C-201ENST00000005226 RRN3Q9NYV6 651 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 TMEM181Q9P2C4 612 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 PADI4Q9UM07 663 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 IPPQ9Y573 584 aa14.11□□□□□ -0.15
USH1C-201ENST00000005226 DLGAP1O14490 977 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 SLC4A1P02730 911 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 MT-ND1P03886 318 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 HLA-DQB2P05538 268 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 MMP3P08254 477 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 HCAR3P49019 387 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 APLP1P51693 650 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 KIF19Q2TAC6 998 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 BHLHA9Q7RTU4 235 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 ARHGAP12Q8IWW6 846 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 OFCC1Q8IZS5 231 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 C2CD4AQ8NCU7 369 aaPredicted RBP14.1□□□□□ -0.15
USH1C-201ENST00000005226 SHCBP1Q8NEM2 672 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 MROH8Q9H579 483 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 CLK4Q9HAZ1 481 aaKnown RBP14.1□□□□□ -0.15
USH1C-201ENST00000005226 THEGQ9P2T0 379 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 FAF1Q9UNN5 650 aaPredicted RBP14.1□□□□□ -0.15
USH1C-201ENST00000005226 LTBP3Q9NS15 1303 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 COL1A2P08123 1366 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 NME4O00746 187 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 PTGESO14684 152 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 CES1P23141 567 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 PGFP49763 221 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 MAXP61244 160 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 C16orf72Q14CZ0 275 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 MAP7D1Q3KQU3 841 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 PAN2Q504Q3 1202 aaKnown RBP14.1□□□□□ -0.15
USH1C-201ENST00000005226 TBCELQ5QJ74 424 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 PRAMEF19Q5SWL8 479 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 GPR158Q5T848 1215 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 IFNEQ86WN2 208 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 ERO1BQ86YB8 467 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 CNTN4Q8IWV2 1026 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 ATPAF2Q8N5M1 289 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 SMG8Q8ND04 991 aaKnown RBP14.1□□□□□ -0.15
USH1C-201ENST00000005226 OR6J1Q8NGC5 347 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 TFAP2CQ92754 450 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 PBXIP1Q96AQ6 731 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 FBXL20Q96IG2 436 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 SENP8Q96LD8 212 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 VAT1Q99536 393 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 FSD1LQ9BXM9 530 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 MAP10Q9P2G4 905 aa14.1□□□□□ -0.15
USH1C-201ENST00000005226 MSI1O43347 362 aaKnown RBP14.09□□□□□ -0.15
USH1C-201ENST00000005226 DDNO94850 711 aaPredicted RBP14.09□□□□□ -0.15
USH1C-201ENST00000005226 SIX3O95343 332 aaPredicted RBP14.09□□□□□ -0.15
USH1C-201ENST00000005226 HNRNPCP07910 306 aaKnown RBP eCLIP14.09□□□□□ -0.15
USH1C-201ENST00000005226 PNPLA4P41247 253 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 PFKPQ01813 784 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 GRB7Q14451 532 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 ADRM1Q16186 407 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 SAMD4BQ5PRF9 694 aaKnown RBP14.09□□□□□ -0.15
USH1C-201ENST00000005226 ZNF772Q68DY9 489 aaPredicted RBP14.09□□□□□ -0.15
USH1C-201ENST00000005226 TTC33Q6PID6 262 aaPredicted RBP14.09□□□□□ -0.15
USH1C-201ENST00000005226 EPHX4Q8IUS5 362 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 OR52K2Q8NGK3 314 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 KCNA7Q96RP8 456 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 GSTO2Q9H4Y5 243 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 AKTIPQ9H8T0 292 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 MPP6Q9NZW5 540 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.09□□□□□ -0.15
USH1C-201ENST00000005226 SARDHQ9UL12 918 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 AAR2Q9Y312 384 aaKnown RBP14.09□□□□□ -0.15
USH1C-201ENST00000005226 PPP2R3BQ9Y5P8 575 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 V9GYQ6 96 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 TNS1Q9HBL0 1735 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms