RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Exoc3l1Q8BI71 739 aa22.86■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Slc30a5Q8R4H9 761 aa22.86■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Wnt9aQ8R5M2 365 aa22.86■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Alg9Q8VDI9 611 aa22.86■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Oas1dQ8VI95 361 aa22.86■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Usp11Q99K46 921 aa22.86■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Q99KU6 348 aa22.86■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Gtf2ird2Q99NI3 936 aa22.86■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Ppil6Q9D6D8 278 aa22.86■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Tmem115Q9WUH1 350 aa22.86■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Aldh18a1Q9Z110 795 aa22.86■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Lactbl1S4R213 581 aa22.86■■□□□ 1.25
Scn1b-201ENSMUST00000098548 OtofQ9ESF1 1997 aa22.86■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Piezo2Q8CD54 2822 aa22.85■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Zfp212G3X8R7 492 aa22.85■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Ctbp1O88712 441 aa22.85■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Chrm1P12657 460 aa22.85■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Eml1Q05BC3 814 aa22.85■■□□□ 1.25
Scn1b-201ENSMUST00000098548 SynaQ5G5D5 617 aa22.85■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Ripor1Q68FE6 1223 aa22.85■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Znf280cQ6P3Y5 742 aa22.85■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Bcas1Q80YN3 633 aa22.85■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Snx30Q8CE50 437 aa22.85■■□□□ 1.25
Scn1b-201ENSMUST00000098548 CherpQ8CGZ0 936 aaKnown RBP22.85■■□□□ 1.25
Scn1b-201ENSMUST00000098548 PygbQ8CI94 843 aaKnown RBP22.85■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Slc5a9Q8VDT1 685 aa22.85■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Adgrf1Q8VEC3 908 aa22.85■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Mark1Q8VHJ5 795 aa22.85■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Pdzd3Q99MJ6 498 aa22.85■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Ilf2Q9CXY6 390 aaKnown RBP22.85■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Oma1Q9D8H7 521 aa22.85■■□□□ 1.25
Scn1b-201ENSMUST00000098548 ApipQ9WVQ5 241 aa22.85■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Smok3aC0HKC8 504 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Smok3bC0HKC9 504 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Dnase1l3O55070 310 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Fpr-rs3O88537 343 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Ly6aP05533 134 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Slc2a7P0C6A1 513 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 CblP22682 913 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Mc1rQ01727 315 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Fam8a1Q3URQ4 399 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Six4Q61321 775 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 RhocQ62159 193 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Fastkd5Q7TMV3 762 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 CenpuQ8C4M7 410 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Pacs1Q8K212 961 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 FntbQ8K2I1 437 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Smyd2Q8R5A0 433 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Homer3Q99JP6 356 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 CinpQ9D0V8 212 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Ror1Q9Z139 937 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Col6a3E9PWQ3 3284 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Mki67E9PVX6 3177 aaKnown RBP22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Gm13285B1AYI3 182 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Gm13275B1AYI8 182 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Cyp4a14O35728 507 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Klc2O88448 599 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 RargP18911 458 aaKnown RBP22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 SagP20443 403 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 CskP41241 450 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 UtyP79457 1212 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Ncf4P97369 339 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Bmp1P98063 991 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Cd300lgQ1ERP8 331 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Hsdl2Q2TPA8 490 aaKnown RBP22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Fam83fQ3UKU4 495 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Q3V0E1 1183 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Slc30a9Q5IRJ6 567 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 ThrspQ62264 150 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Arhgef18Q6P9R4 1021 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Deup1Q7M6Y5 601 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Smoc1Q8BLY1 463 aaKnown RBP22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Cgrrf1Q8BMJ7 332 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 IfnzQ8BQT1 182 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Gm13278Q8CD73 182 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Rps6kl1Q8R2S1 544 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Nup85Q8R480 656 aaKnown RBP22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 TgdsQ8VDR7 355 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Lpgat1Q91YX5 370 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Zmynd10Q99ML0 440 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 4930524N10RikQ9D519 233 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Crlf3Q9Z2L7 442 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Rev3lQ61493 3122 aa22.84■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Ttc30a2A2AKQ8 664 aa22.83■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Gprin2D3Z1D7 455 aa22.83■■□□□ 1.25
Scn1b-201ENSMUST00000098548 AgxtO35423 414 aa22.83■■□□□ 1.25
Scn1b-201ENSMUST00000098548 AvilO88398 819 aa22.83■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Gja4P28235 333 aa22.83■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Myl2P51667 166 aa22.83■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Mrpl10Q3TBW2 262 aaKnown RBP22.83■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Lrrc8bQ5DU41 803 aa22.83■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Kcna4Q61423 654 aa22.83■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Trim17Q7TPM3 477 aa22.83■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Psapl1Q8C1C1 522 aa22.83■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Znf668Q8K2R5 619 aa22.83■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Glcci1Q8K3I9 537 aa22.83■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Gtse1Q8R080 741 aa22.83■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Imp4Q8VHZ7 291 aaKnown RBP22.83■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Zkscan3Q91VW9 553 aa22.83■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Tcaf2Q921K8 919 aa22.83■■□□□ 1.25
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms