RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 CPSF1Q10570 1443 aaKnown RBP21.27■□□□□ 0.99
PHGDH-223ENST00000641597 PNNQ9H307 717 aaKnown RBP21.26■□□□□ 0.99
PHGDH-223ENST00000641597 MRPL50Q8N5N7 158 aaKnown RBP21.26■□□□□ 0.99
PHGDH-223ENST00000641597 ALDH1L2Q3SY69 923 aa21.25■□□□□ 0.99
PHGDH-223ENST00000641597 SPATA31D1Q6ZQQ2 1576 aa21.24■□□□□ 0.99
PHGDH-223ENST00000641597 ZBTB7BO15156 539 aaPredicted RBP21.24■□□□□ 0.99
PHGDH-223ENST00000641597 CDC42BPGQ6DT37 1551 aa21.24■□□□□ 0.99
PHGDH-223ENST00000641597 PLPPR3Q6T4P5 718 aa21.24■□□□□ 0.99
PHGDH-223ENST00000641597 COG3Q96JB2 828 aa21.24■□□□□ 0.99
PHGDH-223ENST00000641597 SIRT2Q8IXJ6 389 aa21.23■□□□□ 0.99
PHGDH-223ENST00000641597 NUCB1Q02818 461 aa21.23■□□□□ 0.99
PHGDH-223ENST00000641597 CCDC61Q9Y6R9 512 aa21.23■□□□□ 0.99
PHGDH-223ENST00000641597 EDC4Q6P2E9 1401 aaKnown RBP21.23■□□□□ 0.99
PHGDH-223ENST00000641597 DLC1Q96QB1 1528 aa21.22■□□□□ 0.99
PHGDH-223ENST00000641597 TWISTNBQ3B726 338 aaPredicted RBP21.22■□□□□ 0.99
PHGDH-223ENST00000641597 ANKRD45Q5TZF3 282 aa21.22■□□□□ 0.99
PHGDH-223ENST00000641597 ZMYM3Q14202 1370 aa21.22■□□□□ 0.99
PHGDH-223ENST00000641597 CHD1LQ86WJ1 897 aa21.21■□□□□ 0.99
PHGDH-223ENST00000641597 ARXQ96QS3 562 aa21.21■□□□□ 0.99
PHGDH-223ENST00000641597 DLG5Q8TDM6 1919 aa21.2■□□□□ 0.98
PHGDH-223ENST00000641597 ZNF853P0CG23 659 aa21.2■□□□□ 0.98
PHGDH-223ENST00000641597 ESF1Q9H501 851 aaKnown RBP21.2■□□□□ 0.98
PHGDH-223ENST00000641597 ROBO2Q9HCK4 1378 aa21.19■□□□□ 0.98
PHGDH-223ENST00000641597 GNAI1P63096 354 aa21.19■□□□□ 0.98
PHGDH-223ENST00000641597 IFT57Q9NWB7 429 aa21.19■□□□□ 0.98
PHGDH-223ENST00000641597 AGLP35573 1532 aa21.18■□□□□ 0.98
PHGDH-223ENST00000641597 SULT6B1Q6IMI4 303 aa21.18■□□□□ 0.98
PHGDH-223ENST00000641597 MCM10Q7L590 875 aa21.18■□□□□ 0.98
PHGDH-223ENST00000641597 CDK12Q9NYV4 1490 aaPredicted RBP21.17■□□□□ 0.98
PHGDH-223ENST00000641597 EIF4A2Q14240 407 aaKnown RBP21.16■□□□□ 0.98
PHGDH-223ENST00000641597 CFAP44Q96MT7 982 aa21.16■□□□□ 0.98
PHGDH-223ENST00000641597 HSP90AB2PQ58FF8 381 aa21.16■□□□□ 0.98
PHGDH-223ENST00000641597 SLC26A8Q96RN1 970 aa21.16■□□□□ 0.98
PHGDH-223ENST00000641597 CEBPAP49715 358 aaPredicted RBP21.15■□□□□ 0.98
PHGDH-223ENST00000641597 MIS18AQ9NYP9 233 aa21.15■□□□□ 0.98
PHGDH-223ENST00000641597 PPP6R1Q9UPN7 881 aa21.14■□□□□ 0.98
PHGDH-223ENST00000641597 LTKP29376 864 aa21.14■□□□□ 0.97
PHGDH-223ENST00000641597 ABCC4O15439 1325 aa21.13■□□□□ 0.97
PHGDH-223ENST00000641597 BRPF1P55201 1214 aaPredicted RBP21.13■□□□□ 0.97
PHGDH-223ENST00000641597 ACEP12821 1306 aa21.13■□□□□ 0.97
PHGDH-223ENST00000641597 PTCH1Q13635 1447 aa21.12■□□□□ 0.97
PHGDH-223ENST00000641597 GZF1Q9H116 711 aaPredicted RBP21.12■□□□□ 0.97
PHGDH-223ENST00000641597 AATKQ6ZMQ8 1374 aa21.12■□□□□ 0.97
PHGDH-223ENST00000641597 REREQ9P2R6 1566 aa21.12■□□□□ 0.97
PHGDH-223ENST00000641597 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.12■□□□□ 0.97
PHGDH-223ENST00000641597 FOXO3O43524 673 aa21.11■□□□□ 0.97
PHGDH-223ENST00000641597 CD2BP2O95400 341 aaKnown RBP21.11■□□□□ 0.97
PHGDH-223ENST00000641597 C16orf71Q8IYS4 520 aaPredicted RBP21.1■□□□□ 0.97
PHGDH-223ENST00000641597 RBM42Q9BTD8 480 aaKnown RBP21.1■□□□□ 0.97
PHGDH-223ENST00000641597 FOXD4L1Q9NU39 408 aa21.1■□□□□ 0.97
PHGDH-223ENST00000641597 MON2Q7Z3U7 1717 aa21.1■□□□□ 0.97
PHGDH-223ENST00000641597 APBB1O00213 710 aa21.1■□□□□ 0.97
PHGDH-223ENST00000641597 CALD1Q05682 793 aaKnown RBP21.1■□□□□ 0.97
PHGDH-223ENST00000641597 TTC21BQ7Z4L5 1316 aa21.1■□□□□ 0.97
PHGDH-223ENST00000641597 ARHGAP45Q92619 1136 aa21.09■□□□□ 0.97
PHGDH-223ENST00000641597 ZNF428Q96B54 188 aa21.09■□□□□ 0.97
PHGDH-223ENST00000641597 PIK3R4Q99570 1358 aa21.09■□□□□ 0.97
PHGDH-223ENST00000641597 C3P01024 1663 aa21.09■□□□□ 0.97
PHGDH-223ENST00000641597 TNRQ92752 1358 aa21.08■□□□□ 0.97
PHGDH-223ENST00000641597 TBC1D9Q6ZT07 1266 aa21.08■□□□□ 0.96
PHGDH-223ENST00000641597 OTUD7AQ8TE49 926 aaPredicted RBP21.08■□□□□ 0.96
PHGDH-223ENST00000641597 KIF2CQ99661 725 aa21.08■□□□□ 0.96
PHGDH-223ENST00000641597 TMEM2Q9UHN6 1383 aa21.07■□□□□ 0.96
PHGDH-223ENST00000641597 KNDC1Q76NI1 1749 aa21.07■□□□□ 0.96
PHGDH-223ENST00000641597 BMP2KLQ5H9B9 411 aa21.07■□□□□ 0.96
PHGDH-223ENST00000641597 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.07■□□□□ 0.96
PHGDH-223ENST00000641597 ADAMTS13Q76LX8 1427 aa21.06■□□□□ 0.96
PHGDH-223ENST00000641597 HSCBQ8IWL3 235 aa21.05■□□□□ 0.96
PHGDH-223ENST00000641597 GCC1Q96CN9 775 aa21.05■□□□□ 0.96
PHGDH-223ENST00000641597 ITSN1Q15811 1721 aa21.05■□□□□ 0.96
PHGDH-223ENST00000641597 GSPT1P15170 499 aaKnown RBP21.05■□□□□ 0.96
PHGDH-223ENST00000641597 ZNF692Q9BU19 519 aaPredicted RBP21.05■□□□□ 0.96
PHGDH-223ENST00000641597 AKAP12Q02952 1782 aa21.05■□□□□ 0.96
PHGDH-223ENST00000641597 TECPR2O15040 1411 aa21.04■□□□□ 0.96
PHGDH-223ENST00000641597 MCM4P33991 863 aa21.04■□□□□ 0.96
PHGDH-223ENST00000641597 RBM25P49756 843 aaKnown RBP21.04■□□□□ 0.96
PHGDH-223ENST00000641597 LMOD3Q0VAK6 560 aa21.04■□□□□ 0.96
PHGDH-223ENST00000641597 SMARCA5O60264 1052 aaPredicted RBP21.03■□□□□ 0.96
PHGDH-223ENST00000641597 PEAK1Q9H792 1746 aa21.03■□□□□ 0.96
PHGDH-223ENST00000641597 API5Q9BZZ5 524 aaKnown RBP21.02■□□□□ 0.96
PHGDH-223ENST00000641597 RIMS1Q86UR5 1692 aaKnown RBP21.02■□□□□ 0.96
PHGDH-223ENST00000641597 NUTM2GQ5VZR2 741 aa21.02■□□□□ 0.96
PHGDH-223ENST00000641597 CHMP5Q9NZZ3 219 aa21.02■□□□□ 0.96
PHGDH-223ENST00000641597 MEIS3Q99687 375 aa21.01■□□□□ 0.95
PHGDH-223ENST00000641597 RGS12O14924 1447 aa21.01■□□□□ 0.95
PHGDH-223ENST00000641597 PTPRUQ92729 1446 aa21.01■□□□□ 0.95
PHGDH-223ENST00000641597 MAP3K19Q56UN5 1328 aa21.01■□□□□ 0.95
PHGDH-223ENST00000641597 F6X3S4 739 aa21.01■□□□□ 0.95
PHGDH-223ENST00000641597 CHL1O00533 1208 aa21.01■□□□□ 0.95
PHGDH-223ENST00000641597 G2E3Q7L622 706 aa21.01■□□□□ 0.95
PHGDH-223ENST00000641597 UBR1Q8IWV7 1749 aa21■□□□□ 0.95
PHGDH-223ENST00000641597 PLEKHM2Q8IWE5 1019 aa21■□□□□ 0.95
PHGDH-223ENST00000641597 ANO8Q9HCE9 1232 aaPredicted RBP21■□□□□ 0.95
PHGDH-223ENST00000641597 MSH6P52701 1360 aa21■□□□□ 0.95
PHGDH-223ENST00000641597 OVOS2A0A0J9YW53 1432 aa21■□□□□ 0.95
PHGDH-223ENST00000641597 OVOS2Q6IE36 1432 aa21■□□□□ 0.95
PHGDH-223ENST00000641597 HDGFP51858 240 aaKnown RBP20.99■□□□□ 0.95
PHGDH-223ENST00000641597 MTHFSDQ2M296 383 aaKnown RBP20.99■□□□□ 0.95
PHGDH-223ENST00000641597 USP6P35125 1406 aa20.99■□□□□ 0.95
PHGDH-223ENST00000641597 SLC4A2P04920 1241 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms