RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 RGPD8O14715 1765 aaPredicted RBP14.92□□□□□ -0.02
RBFOX1-224ENST00000641259 ITSN1Q15811 1721 aa14.92□□□□□ -0.02
RBFOX1-224ENST00000641259 PTCH1Q13635 1447 aa14.92□□□□□ -0.02
RBFOX1-224ENST00000641259 VGLL3A8MV65 326 aa14.92□□□□□ -0.02
RBFOX1-224ENST00000641259 APAF1O14727 1248 aa14.92□□□□□ -0.02
RBFOX1-224ENST00000641259 RNF123Q5XPI4 1314 aa14.91□□□□□ -0.02
RBFOX1-224ENST00000641259 KCNA6P17658 529 aa14.91□□□□□ -0.02
RBFOX1-224ENST00000641259 NME9Q86XW9 330 aa14.91□□□□□ -0.02
RBFOX1-224ENST00000641259 DMRT2Q9Y5R5 561 aa14.91□□□□□ -0.02
RBFOX1-224ENST00000641259 NRKQ7Z2Y5 1582 aa14.91□□□□□ -0.02
RBFOX1-224ENST00000641259 GRPEL1Q9HAV7 217 aa14.9□□□□□ -0.02
RBFOX1-224ENST00000641259 CCDC61Q9Y6R9 512 aa14.9□□□□□ -0.02
RBFOX1-224ENST00000641259 SPINK5Q9NQ38 1064 aaPredicted RBP14.9□□□□□ -0.02
RBFOX1-224ENST00000641259 IGSF3O75054 1194 aa14.89□□□□□ -0.03
RBFOX1-224ENST00000641259 RBM33Q96EV2 1170 aaKnown RBP14.89□□□□□ -0.03
RBFOX1-224ENST00000641259 EDC4Q6P2E9 1401 aaKnown RBP14.89□□□□□ -0.03
RBFOX1-224ENST00000641259 IQSEC2Q5JU85 1478 aa14.89□□□□□ -0.03
RBFOX1-224ENST00000641259 MRE11P49959 708 aa14.89□□□□□ -0.03
RBFOX1-224ENST00000641259 CENPQQ7L2Z9 268 aaPredicted RBP14.88□□□□□ -0.03
RBFOX1-224ENST00000641259 PLCB2Q00722 1185 aa14.88□□□□□ -0.03
RBFOX1-224ENST00000641259 TPM2P07951 284 aa14.87□□□□□ -0.03
RBFOX1-224ENST00000641259 CHD2O14647 1828 aaKnown RBP14.87□□□□□ -0.03
RBFOX1-224ENST00000641259 HSP90AB1P08238 724 aaKnown RBP14.87□□□□□ -0.03
RBFOX1-224ENST00000641259 PDE3BQ13370 1112 aa14.87□□□□□ -0.03
RBFOX1-224ENST00000641259 NALCNQ8IZF0 1738 aa14.87□□□□□ -0.03
RBFOX1-224ENST00000641259 MAP2P11137 1827 aaKnown RBP14.86□□□□□ -0.03
RBFOX1-224ENST00000641259 RRP7AQ9Y3A4 280 aaKnown RBP14.86□□□□□ -0.03
RBFOX1-224ENST00000641259 ACEP12821 1306 aa14.86□□□□□ -0.03
RBFOX1-224ENST00000641259 SEC24BO95487 1268 aa14.86□□□□□ -0.03
RBFOX1-224ENST00000641259 MCM4P33991 863 aa14.85□□□□□ -0.03
RBFOX1-224ENST00000641259 DUSP27Q5VZP5 1158 aa14.85□□□□□ -0.03
RBFOX1-224ENST00000641259 ANKLE2Q86XL3 938 aa14.85□□□□□ -0.03
RBFOX1-224ENST00000641259 CLUAP1Q96AJ1 413 aa14.85□□□□□ -0.03
RBFOX1-224ENST00000641259 XPCQ01831 940 aaPredicted RBP14.85□□□□□ -0.03
RBFOX1-224ENST00000641259 SETD1BQ9UPS6 1966 aaKnown RBP14.85□□□□□ -0.03
RBFOX1-224ENST00000641259 POLKQ9UBT6 870 aa14.85□□□□□ -0.03
RBFOX1-224ENST00000641259 UQCRHLA0A096LP55 91 aa14.84□□□□□ -0.03
RBFOX1-224ENST00000641259 UQCRHP07919 91 aa14.84□□□□□ -0.03
RBFOX1-224ENST00000641259 HSCBQ8IWL3 235 aa14.84□□□□□ -0.03
RBFOX1-224ENST00000641259 PMFBP1Q8TBY8 1022 aa14.84□□□□□ -0.03
RBFOX1-224ENST00000641259 CBX1P83916 185 aa14.84□□□□□ -0.03
RBFOX1-224ENST00000641259 C8orf34Q49A92 452 aa14.84□□□□□ -0.03
RBFOX1-224ENST00000641259 PNPLA6Q8IY17 1366 aa14.83□□□□□ -0.03
RBFOX1-224ENST00000641259 EMILIN1Q9Y6C2 1016 aa14.83□□□□□ -0.04
RBFOX1-224ENST00000641259 PDIA4P13667 645 aaKnown RBP14.83□□□□□ -0.04
RBFOX1-224ENST00000641259 CFAP53Q96M91 514 aa14.83□□□□□ -0.04
RBFOX1-224ENST00000641259 U2AF1L5P0DN76 240 aaPredicted RBP14.82□□□□□ -0.04
RBFOX1-224ENST00000641259 U2AF1Q01081 240 aaKnown RBP eCLIP14.82□□□□□ -0.04
RBFOX1-224ENST00000641259 USP6P35125 1406 aa14.82□□□□□ -0.04
RBFOX1-224ENST00000641259 FMN2Q9NZ56 1722 aa14.82□□□□□ -0.04
RBFOX1-224ENST00000641259 TCP11L2Q8N4U5 519 aa14.82□□□□□ -0.04
RBFOX1-224ENST00000641259 COG6Q9Y2V7 657 aa14.82□□□□□ -0.04
RBFOX1-224ENST00000641259 PLEKHG3A1L390 1219 aa14.81□□□□□ -0.04
RBFOX1-224ENST00000641259 GOLGA2Q08379 1002 aa14.81□□□□□ -0.04
RBFOX1-224ENST00000641259 SLFN5Q08AF3 891 aa14.81□□□□□ -0.04
RBFOX1-224ENST00000641259 RUNDC1Q96C34 613 aa14.81□□□□□ -0.04
RBFOX1-224ENST00000641259 U2SURPO15042 1029 aaKnown RBP14.81□□□□□ -0.04
RBFOX1-224ENST00000641259 RRS1Q15050 365 aaKnown RBP14.81□□□□□ -0.04
RBFOX1-224ENST00000641259 FOXD4L5Q5VV16 416 aaPredicted RBP14.81□□□□□ -0.04
RBFOX1-224ENST00000641259 PAXIP1Q6ZW49 1069 aaPredicted RBP14.81□□□□□ -0.04
RBFOX1-224ENST00000641259 WWC1Q8IX03 1113 aa14.81□□□□□ -0.04
RBFOX1-224ENST00000641259 FOXD4L4Q8WXT5 416 aaPredicted RBP14.81□□□□□ -0.04
RBFOX1-224ENST00000641259 PLEKHF1Q96S99 279 aa14.81□□□□□ -0.04
RBFOX1-224ENST00000641259 BCL2L13Q9BXK5 485 aa14.81□□□□□ -0.04
RBFOX1-224ENST00000641259 SSH2Q76I76 1423 aa14.81□□□□□ -0.04
RBFOX1-224ENST00000641259 ERBB4Q15303 1308 aa14.81□□□□□ -0.04
RBFOX1-224ENST00000641259 PIK3R4Q99570 1358 aa14.8□□□□□ -0.04
RBFOX1-224ENST00000641259 NPHP4O75161 1426 aaPredicted RBP14.8□□□□□ -0.04
RBFOX1-224ENST00000641259 TRMT2AQ8IZ69 625 aaKnown RBP14.8□□□□□ -0.04
RBFOX1-224ENST00000641259 E9PSI1 815 aa14.8□□□□□ -0.04
RBFOX1-224ENST00000641259 CHMP4AQ9BY43 222 aa14.8□□□□□ -0.04
RBFOX1-224ENST00000641259 TTC21BQ7Z4L5 1316 aa14.8□□□□□ -0.04
RBFOX1-224ENST00000641259 FAM177BA6PVY3 158 aa14.79□□□□□ -0.04
RBFOX1-224ENST00000641259 GOLGA6L22H0YM25 854 aa14.79□□□□□ -0.04
RBFOX1-224ENST00000641259 NASPP49321 788 aaPredicted RBP14.79□□□□□ -0.04
RBFOX1-224ENST00000641259 NAP1L2Q9ULW6 460 aaPredicted RBP14.78□□□□□ -0.04
RBFOX1-224ENST00000641259 DDX49Q9Y6V7 483 aaKnown RBP14.78□□□□□ -0.04
RBFOX1-224ENST00000641259 OVOS2A0A0J9YW53 1432 aa14.78□□□□□ -0.04
RBFOX1-224ENST00000641259 OVOS2Q6IE36 1432 aa14.78□□□□□ -0.04
RBFOX1-224ENST00000641259 LRRC7Q96NW7 1537 aa14.78□□□□□ -0.04
RBFOX1-224ENST00000641259 CALD1Q05682 793 aaKnown RBP14.78□□□□□ -0.04
RBFOX1-224ENST00000641259 ZNF692Q9BU19 519 aaPredicted RBP14.78□□□□□ -0.04
RBFOX1-224ENST00000641259 PHF23Q9BUL5 403 aaPredicted RBP14.78□□□□□ -0.04
RBFOX1-224ENST00000641259 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.78□□□□□ -0.04
RBFOX1-224ENST00000641259 PIK3C2AO00443 1686 aa14.78□□□□□ -0.04
RBFOX1-224ENST00000641259 PEAK1Q9H792 1746 aa14.78□□□□□ -0.04
RBFOX1-224ENST00000641259 COG3Q96JB2 828 aa14.77□□□□□ -0.05
RBFOX1-224ENST00000641259 TBC1D2Q9BYX2 928 aa14.77□□□□□ -0.05
RBFOX1-224ENST00000641259 DIAPH1O60610 1272 aaKnown RBP14.77□□□□□ -0.05
RBFOX1-224ENST00000641259 MARF1Q9Y4F3 1742 aaKnown RBP14.76□□□□□ -0.05
RBFOX1-224ENST00000641259 ZNF771Q7L3S4 317 aaPredicted RBP14.76□□□□□ -0.05
RBFOX1-224ENST00000641259 RNF214Q8ND24 703 aa14.76□□□□□ -0.05
RBFOX1-224ENST00000641259 CHMP5Q9NZZ3 219 aa14.76□□□□□ -0.05
RBFOX1-224ENST00000641259 TSC1Q92574 1164 aa14.76□□□□□ -0.05
RBFOX1-224ENST00000641259 AATKQ6ZMQ8 1374 aa14.75□□□□□ -0.05
RBFOX1-224ENST00000641259 CDK12Q9NYV4 1490 aaPredicted RBP14.75□□□□□ -0.05
RBFOX1-224ENST00000641259 FOXD4L6Q3SYB3 417 aaPredicted RBP14.75□□□□□ -0.05
RBFOX1-224ENST00000641259 FOXD4L3Q6VB84 417 aaPredicted RBP14.75□□□□□ -0.05
RBFOX1-224ENST00000641259 PANK1Q8TE04 598 aa14.75□□□□□ -0.05
RBFOX1-224ENST00000641259 SPDYE4A6NLX3 237 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms