RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 GPKOWQ92917 476 aaPredicted RBP eCLIP10.76□□□□□ -0.69
SCARB2-224ENST00000640880 HPS5Q9UPZ3 1129 aa10.76□□□□□ -0.69
SCARB2-224ENST00000640880 SCRIBQ14160 1630 aa10.76□□□□□ -0.69
SCARB2-224ENST00000640880 UNCXA6NJT0 531 aa10.75□□□□□ -0.69
SCARB2-224ENST00000640880 EML3Q32P44 896 aa10.75□□□□□ -0.69
SCARB2-224ENST00000640880 NBPF14Q5TI25 921 aa10.75□□□□□ -0.69
SCARB2-224ENST00000640880 OGFOD1Q8N543 542 aa10.75□□□□□ -0.69
SCARB2-224ENST00000640880 ANKK1Q8NFD2 765 aa10.75□□□□□ -0.69
SCARB2-224ENST00000640880 RBM47A0AV96 593 aaKnown RBP10.74□□□□□ -0.69
SCARB2-224ENST00000640880 SOWAHDA6NJG2 315 aa10.74□□□□□ -0.69
SCARB2-224ENST00000640880 SERPINB4P48594 390 aa10.74□□□□□ -0.69
SCARB2-224ENST00000640880 DPYDQ12882 1025 aa10.74□□□□□ -0.69
SCARB2-224ENST00000640880 ZNF594Q96JF6 807 aaPredicted RBP10.74□□□□□ -0.69
SCARB2-224ENST00000640880 NUDT12Q9BQG2 462 aa10.74□□□□□ -0.69
SCARB2-224ENST00000640880 EVA1BQ9NVM1 165 aa10.74□□□□□ -0.69
SCARB2-224ENST00000640880 FAM205CA6NFA0 338 aa10.73□□□□□ -0.69
SCARB2-224ENST00000640880 MAP7D1Q3KQU3 841 aa10.73□□□□□ -0.69
SCARB2-224ENST00000640880 MSS51Q4VC12 460 aa10.73□□□□□ -0.69
SCARB2-224ENST00000640880 DNAJC14Q6Y2X3 702 aaPredicted RBP10.73□□□□□ -0.69
SCARB2-224ENST00000640880 ADAM32Q8TC27 787 aa10.73□□□□□ -0.69
SCARB2-224ENST00000640880 DXOO77932 396 aaKnown RBP10.72□□□□□ -0.69
SCARB2-224ENST00000640880 SWI5Q1ZZU3 235 aa10.72□□□□□ -0.69
SCARB2-224ENST00000640880 TRIM50Q86XT4 487 aa10.72□□□□□ -0.69
SCARB2-224ENST00000640880 ARHGAP9Q9BRR9 750 aa10.72□□□□□ -0.69
SCARB2-224ENST00000640880 CHIC2Q9UKJ5 165 aa10.72□□□□□ -0.69
SCARB2-224ENST00000640880 SOWAHBA6NEL2 793 aa10.71□□□□□ -0.69
SCARB2-224ENST00000640880 GOLGA8CPA6NN73 597 aa10.71□□□□□ -0.69
SCARB2-224ENST00000640880 ERCC3P19447 782 aa10.71□□□□□ -0.69
SCARB2-224ENST00000640880 BCAMP50895 628 aa10.71□□□□□ -0.69
SCARB2-224ENST00000640880 CLDN10P78369 228 aa10.71□□□□□ -0.69
SCARB2-224ENST00000640880 TRAF7Q6Q0C0 670 aa10.71□□□□□ -0.69
SCARB2-224ENST00000640880 ADGRD1Q6QNK2 874 aa10.71□□□□□ -0.69
SCARB2-224ENST00000640880 DNAAF2Q9NVR5 837 aaKnown RBP10.71□□□□□ -0.69
SCARB2-224ENST00000640880 ATP1A2P50993 1020 aa10.7□□□□□ -0.7
SCARB2-224ENST00000640880 FAM160A2Q8N612 972 aaPredicted RBP10.7□□□□□ -0.7
SCARB2-224ENST00000640880 HS3ST6Q96QI5 342 aa10.7□□□□□ -0.7
SCARB2-224ENST00000640880 TSR3Q9UJK0 312 aaKnown RBP10.7□□□□□ -0.7
SCARB2-224ENST00000640880 NOD1Q9Y239 953 aa10.7□□□□□ -0.7
SCARB2-224ENST00000640880 LOC105371045A0A1W2PR82 267 aa10.69□□□□□ -0.7
SCARB2-224ENST00000640880 SCNN1AP37088 669 aa10.69□□□□□ -0.7
SCARB2-224ENST00000640880 TSGA10IPQ3SY00 556 aa10.69□□□□□ -0.7
SCARB2-224ENST00000640880 ZBTB33Q86T24 672 aa10.69□□□□□ -0.7
SCARB2-224ENST00000640880 SPSB2Q99619 263 aa10.69□□□□□ -0.7
SCARB2-224ENST00000640880 PRDM9Q9NQV7 894 aa10.69□□□□□ -0.7
SCARB2-224ENST00000640880 BIN2Q9UBW5 565 aaPredicted RBP10.69□□□□□ -0.7
SCARB2-224ENST00000640880 MMP16P51512 607 aa10.68□□□□□ -0.7
SCARB2-224ENST00000640880 MARSP56192 900 aaKnown RBP10.68□□□□□ -0.7
SCARB2-224ENST00000640880 DOLKQ9UPQ8 538 aa10.68□□□□□ -0.7
SCARB2-224ENST00000640880 HRO43593 1189 aa10.67□□□□□ -0.7
SCARB2-224ENST00000640880 DZIP3Q86Y13 1208 aaKnown RBP10.67□□□□□ -0.7
SCARB2-224ENST00000640880 SPNS2Q8IVW8 549 aa10.67□□□□□ -0.7
SCARB2-224ENST00000640880 LARGE2Q8N3Y3 721 aa10.67□□□□□ -0.7
SCARB2-224ENST00000640880 STAC3Q96MF2 364 aa10.67□□□□□ -0.7
SCARB2-224ENST00000640880 PRMT3O60678 531 aa10.66□□□□□ -0.7
SCARB2-224ENST00000640880 LSM11P83369 360 aaKnown RBP eCLIP10.66□□□□□ -0.7
SCARB2-224ENST00000640880 OXLD1Q5BKU9 147 aa10.66□□□□□ -0.7
SCARB2-224ENST00000640880 NOM1Q5C9Z4 860 aaKnown RBP10.66□□□□□ -0.7
SCARB2-224ENST00000640880 CCDC85AQ96PX6 553 aaPredicted RBP10.66□□□□□ -0.7
SCARB2-224ENST00000640880 KIAA1024Q9UPX6 916 aa10.66□□□□□ -0.7
SCARB2-224ENST00000640880 MMRN1Q13201 1228 aa10.65□□□□□ -0.7
SCARB2-224ENST00000640880 SH3BP5LQ7L8J4 393 aa10.65□□□□□ -0.7
SCARB2-224ENST00000640880 C1orf216Q8TAB5 229 aa10.65□□□□□ -0.7
SCARB2-224ENST00000640880 CARD14Q9BXL6 1004 aa10.65□□□□□ -0.7
SCARB2-224ENST00000640880 POTEB3A0JP26 581 aa10.64□□□□□ -0.71
SCARB2-224ENST00000640880 GTF2IP78347 998 aa10.64□□□□□ -0.71
SCARB2-224ENST00000640880 POTEBQ6S5H4 581 aa10.64□□□□□ -0.71
SCARB2-224ENST00000640880 SIX5Q8N196 739 aa10.64□□□□□ -0.71
SCARB2-224ENST00000640880 BCL2L13Q9BXK5 485 aa10.64□□□□□ -0.71
SCARB2-224ENST00000640880 UNC93B1Q9H1C4 597 aa10.64□□□□□ -0.71
SCARB2-224ENST00000640880 RBM19Q9Y4C8 960 aaKnown RBP10.64□□□□□ -0.71
SCARB2-224ENST00000640880 ZBTB7BO15156 539 aaPredicted RBP10.63□□□□□ -0.71
SCARB2-224ENST00000640880 DKK1O94907 266 aa10.63□□□□□ -0.71
SCARB2-224ENST00000640880 SEC13P55735 322 aa10.63□□□□□ -0.71
SCARB2-224ENST00000640880 COPS2P61201 443 aa10.63□□□□□ -0.71
SCARB2-224ENST00000640880 WNT2BQ93097 391 aa10.63□□□□□ -0.71
SCARB2-224ENST00000640880 MRRFQ96E11 262 aaKnown RBP10.63□□□□□ -0.71
SCARB2-224ENST00000640880 PRIMPOLQ96LW4 560 aa10.63□□□□□ -0.71
SCARB2-224ENST00000640880 KIAA1522Q9P206 1035 aaPredicted RBP10.63□□□□□ -0.71
SCARB2-224ENST00000640880 BICRAQ9NZM4 1560 aa10.62□□□□□ -0.71
SCARB2-224ENST00000640880 MAGEB6P1A0A0J9YX57 407 aa10.62□□□□□ -0.71
SCARB2-224ENST00000640880 ABL1P00519 1130 aa10.62□□□□□ -0.71
SCARB2-224ENST00000640880 ZNF16P17020 682 aaPredicted RBP10.62□□□□□ -0.71
SCARB2-224ENST00000640880 CCDC24Q8N4L8 307 aa10.62□□□□□ -0.71
SCARB2-224ENST00000640880 SIRT1Q96EB6 747 aa10.62□□□□□ -0.71
SCARB2-224ENST00000640880 CXXC1Q9P0U4 656 aaPredicted RBP10.62□□□□□ -0.71
SCARB2-224ENST00000640880 GIGYF1O75420 1035 aaPredicted RBP10.61□□□□□ -0.71
SCARB2-224ENST00000640880 OCLNQ16625 522 aa10.61□□□□□ -0.71
SCARB2-224ENST00000640880 CCDC102BQ68D86 513 aa10.61□□□□□ -0.71
SCARB2-224ENST00000640880 TPCN2Q8NHX9 752 aa10.61□□□□□ -0.71
SCARB2-224ENST00000640880 GIPC2Q8TF65 315 aa10.61□□□□□ -0.71
SCARB2-224ENST00000640880 IGSF5Q9NSI5 407 aa10.61□□□□□ -0.71
SCARB2-224ENST00000640880 SHROOM4Q9ULL8 1493 aa10.61□□□□□ -0.71
SCARB2-224ENST00000640880 SFI1A8K8P3 1242 aa10.6□□□□□ -0.71
SCARB2-224ENST00000640880 PSME1Q06323 249 aa10.6□□□□□ -0.71
SCARB2-224ENST00000640880 ZNF211Q13398 564 aaPredicted RBP10.6□□□□□ -0.71
SCARB2-224ENST00000640880 PTCRAQ6ISU1 281 aaPredicted RBP10.6□□□□□ -0.71
SCARB2-224ENST00000640880 WBP1LQ9NX94 342 aa10.6□□□□□ -0.71
SCARB2-224ENST00000640880 ANKRD33BA6NCL7 494 aa10.59□□□□□ -0.71
SCARB2-224ENST00000640880 H3BRB1 525 aa10.59□□□□□ -0.71
SCARB2-224ENST00000640880 TLL1O43897 1013 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms