RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 USP6P35125 1406 aa7.21□□□□□ -1.25
RTTN-218ENST00000640408 CDC42BPGQ6DT37 1551 aa7.21□□□□□ -1.26
RTTN-218ENST00000640408 IP6K1Q92551 441 aa7.21□□□□□ -1.26
RTTN-218ENST00000640408 POLR3AO14802 1390 aaPredicted RBP7.21□□□□□ -1.26
RTTN-218ENST00000640408 PRR36Q9H6K5 1346 aa7.21□□□□□ -1.26
RTTN-218ENST00000640408 FANCIQ9NVI1 1328 aa7.21□□□□□ -1.26
RTTN-218ENST00000640408 AMER1Q5JTC6 1135 aaPredicted RBP7.21□□□□□ -1.26
RTTN-218ENST00000640408 A0A1W2PP64 1363 aa7.21□□□□□ -1.26
RTTN-218ENST00000640408 CANXP27824 592 aaKnown RBP7.21□□□□□ -1.26
RTTN-218ENST00000640408 TNS3Q68CZ2 1445 aa7.2□□□□□ -1.26
RTTN-218ENST00000640408 TEFQ10587 303 aa7.2□□□□□ -1.26
RTTN-218ENST00000640408 MST1RQ04912 1400 aa7.2□□□□□ -1.26
RTTN-218ENST00000640408 GOLGA6L22H0YM25 854 aa7.2□□□□□ -1.26
RTTN-218ENST00000640408 EXOC5O00471 708 aa7.2□□□□□ -1.26
RTTN-218ENST00000640408 FAM9BQ8IZU0 186 aa7.2□□□□□ -1.26
RTTN-218ENST00000640408 C8orf37Q96NL8 207 aa7.2□□□□□ -1.26
RTTN-218ENST00000640408 USP31Q70CQ4 1352 aa7.2□□□□□ -1.26
RTTN-218ENST00000640408 SIGLEC1Q9BZZ2 1709 aa7.2□□□□□ -1.26
RTTN-218ENST00000640408 DNTTIP2Q5QJE6 756 aaKnown RBP7.2□□□□□ -1.26
RTTN-218ENST00000640408 FCHSD2O94868 740 aa7.19□□□□□ -1.26
RTTN-218ENST00000640408 MSNP26038 577 aaKnown RBP7.19□□□□□ -1.26
RTTN-218ENST00000640408 TRPM1Q7Z4N2 1603 aa7.19□□□□□ -1.26
RTTN-218ENST00000640408 TNNT3P45378 269 aaPredicted RBP7.19□□□□□ -1.26
RTTN-218ENST00000640408 POLR1AO95602 1720 aaPredicted RBP7.19□□□□□ -1.26
RTTN-218ENST00000640408 RTL1A6NKG5 1358 aa7.19□□□□□ -1.26
RTTN-218ENST00000640408 PPP2R1AP30153 589 aa7.19□□□□□ -1.26
RTTN-218ENST00000640408 PNISRQ8TF01 805 aaKnown RBP7.19□□□□□ -1.26
RTTN-218ENST00000640408 AATKQ6ZMQ8 1374 aa7.18□□□□□ -1.26
RTTN-218ENST00000640408 ASXL1Q8IXJ9 1541 aa7.18□□□□□ -1.26
RTTN-218ENST00000640408 USP21Q9UK80 565 aa7.18□□□□□ -1.26
RTTN-218ENST00000640408 HSPA1LP34931 641 aa7.18□□□□□ -1.26
RTTN-218ENST00000640408 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.18□□□□□ -1.26
RTTN-218ENST00000640408 ANKRD24Q8TF21 1146 aa7.18□□□□□ -1.26
RTTN-218ENST00000640408 PTMAP06454 111 aaKnown RBP7.18□□□□□ -1.26
RTTN-218ENST00000640408 IRX6P78412 446 aaPredicted RBP7.18□□□□□ -1.26
RTTN-218ENST00000640408 THRAP3Q9Y2W1 955 aaKnown RBP7.18□□□□□ -1.26
RTTN-218ENST00000640408 ARHGEF25Q86VW2 580 aa7.17□□□□□ -1.26
RTTN-218ENST00000640408 NWD1Q149M9 1564 aa7.17□□□□□ -1.26
RTTN-218ENST00000640408 SALL2Q9Y467 1007 aaPredicted RBP7.17□□□□□ -1.26
RTTN-218ENST00000640408 RUNDC1Q96C34 613 aa7.17□□□□□ -1.26
RTTN-218ENST00000640408 MYH16Q9H6N6 1097 aa7.17□□□□□ -1.26
RTTN-218ENST00000640408 CHMP4BQ9H444 224 aaKnown RBP7.17□□□□□ -1.26
RTTN-218ENST00000640408 BTG4Q9NY30 223 aa7.17□□□□□ -1.26
RTTN-218ENST00000640408 MS4A1P11836 297 aa7.16□□□□□ -1.26
RTTN-218ENST00000640408 TTC5Q8N0Z6 440 aa7.16□□□□□ -1.26
RTTN-218ENST00000640408 TCP11L2Q8N4U5 519 aa7.16□□□□□ -1.26
RTTN-218ENST00000640408 HDAC5Q9UQL6 1122 aa7.16□□□□□ -1.26
RTTN-218ENST00000640408 MAP3K19Q56UN5 1328 aa7.16□□□□□ -1.26
RTTN-218ENST00000640408 IL2RBP14784 551 aa7.16□□□□□ -1.26
RTTN-218ENST00000640408 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.16□□□□□ -1.262e-6■□□□□ 11.1
RTTN-218ENST00000640408 RBM6P78332 1123 aaKnown RBP7.16□□□□□ -1.26
RTTN-218ENST00000640408 DDB1Q16531 1140 aa7.16□□□□□ -1.26
RTTN-218ENST00000640408 UNC5CLQ8IV45 518 aa7.16□□□□□ -1.26
RTTN-218ENST00000640408 IPO9Q96P70 1041 aaKnown RBP7.16□□□□□ -1.26
RTTN-218ENST00000640408 ZNF530Q6P9A1 599 aaPredicted RBP7.16□□□□□ -1.26
RTTN-218ENST00000640408 CARD10Q9BWT7 1032 aa7.16□□□□□ -1.26
RTTN-218ENST00000640408 INSRP06213 1382 aa7.16□□□□□ -1.26
RTTN-218ENST00000640408 PDE4CQ08493 712 aa7.15□□□□□ -1.26
RTTN-218ENST00000640408 CHAF1AQ13111 956 aaPredicted RBP7.15□□□□□ -1.26
RTTN-218ENST00000640408 CHRNA2Q15822 529 aa7.15□□□□□ -1.26
RTTN-218ENST00000640408 SULT6B1Q6IMI4 303 aa7.15□□□□□ -1.26
RTTN-218ENST00000640408 SMARCC1Q92922 1105 aaPredicted RBP7.15□□□□□ -1.26
RTTN-218ENST00000640408 CPSF1Q10570 1443 aaKnown RBP7.15□□□□□ -1.26
RTTN-218ENST00000640408 RXRBP28702 533 aa7.15□□□□□ -1.26
RTTN-218ENST00000640408 IFNL2Q8IZJ0 200 aa7.15□□□□□ -1.26
RTTN-218ENST00000640408 PER1O15534 1290 aaPredicted RBP7.15□□□□□ -1.26
RTTN-218ENST00000640408 RRS1Q15050 365 aaKnown RBP7.15□□□□□ -1.26
RTTN-218ENST00000640408 POLKQ9UBT6 870 aa7.15□□□□□ -1.27
RTTN-218ENST00000640408 BLMP54132 1417 aaPredicted RBP7.15□□□□□ -1.27
RTTN-218ENST00000640408 CABLES1Q8TDN4 633 aa7.14□□□□□ -1.27
RTTN-218ENST00000640408 CARD14Q9BXL6 1004 aa7.14□□□□□ -1.27
RTTN-218ENST00000640408 QTRT2Q9H974 415 aaKnown RBP7.14□□□□□ -1.27
RTTN-218ENST00000640408 HOXC9P31274 260 aa7.14□□□□□ -1.27
RTTN-218ENST00000640408 WDR17Q8IZU2 1322 aa7.14□□□□□ -1.27
RTTN-218ENST00000640408 CPDO75976 1380 aa7.14□□□□□ -1.27
RTTN-218ENST00000640408 HTATSF1O43719 755 aaKnown RBP7.14□□□□□ -1.27
RTTN-218ENST00000640408 ZCRB1Q8TBF4 217 aaKnown RBP7.14□□□□□ -1.27
RTTN-218ENST00000640408 USP19O94966 1318 aa7.14□□□□□ -1.27
RTTN-218ENST00000640408 KIAA0232Q92628 1395 aa7.13□□□□□ -1.27
RTTN-218ENST00000640408 GNAI1P63096 354 aa7.13□□□□□ -1.27
RTTN-218ENST00000640408 EMILIN1Q9Y6C2 1016 aa7.13□□□□□ -1.27
RTTN-218ENST00000640408 PNPLA6Q8IY17 1366 aa7.13□□□□□ -1.27
RTTN-218ENST00000640408 ADGRB2O60241 1585 aa7.13□□□□□ -1.27
RTTN-218ENST00000640408 KIF1AQ12756 1690 aa7.13□□□□□ -1.27
RTTN-218ENST00000640408 XRN1Q8IZH2 1706 aaKnown RBP7.13□□□□□ -1.27
RTTN-218ENST00000640408 KNDC1Q76NI1 1749 aa7.13□□□□□ -1.27
RTTN-218ENST00000640408 PRKAR2BP31323 418 aa7.13□□□□□ -1.27
RTTN-218ENST00000640408 NEUROD2Q15784 382 aa7.13□□□□□ -1.27
RTTN-218ENST00000640408 NCBP3Q53F19 620 aaKnown RBP7.13□□□□□ -1.27
RTTN-218ENST00000640408 TEX13AQ9BXU3 409 aaPredicted RBP7.13□□□□□ -1.27
RTTN-218ENST00000640408 STK31Q9BXU1 1019 aa7.12□□□□□ -1.27
RTTN-218ENST00000640408 APPP05067 770 aa7.12□□□□□ -1.27
RTTN-218ENST00000640408 VPS72Q15906 364 aa7.12□□□□□ -1.27
RTTN-218ENST00000640408 AFF2P51816 1311 aa7.12□□□□□ -1.27
RTTN-218ENST00000640408 CHD2O14647 1828 aaKnown RBP7.12□□□□□ -1.27
RTTN-218ENST00000640408 GOLGA2Q08379 1002 aa7.12□□□□□ -1.27
RTTN-218ENST00000640408 GSE1Q14687 1217 aa7.12□□□□□ -1.27
RTTN-218ENST00000640408 HSP90AB2PQ58FF8 381 aa7.12□□□□□ -1.27
RTTN-218ENST00000640408 DDX17Q92841 729 aaKnown RBP7.11□□□□□ -1.27
RTTN-218ENST00000640408 MYO5BQ9ULV0 1848 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms