RNA–Protein interactions for RNA: ENST00000640352.1

CNTN2-231, Transcript of contactin 2, human

TSL 5

Gene CNTN2, Length 4,000 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTN2-231	ENST00000640352	ZNF428	Q96B54	188 aa		10.87	□□□□□ -0.67
CNTN2-231	ENST00000640352	PANK2	Q9BZ23	570 aa		10.87	□□□□□ -0.67
CNTN2-231	ENST00000640352	EMILIN1	Q9Y6C2	1016 aa		10.87	□□□□□ -0.67
CNTN2-231	ENST00000640352	A2ML1	A8K2U0	1454 aa		10.87	□□□□□ -0.67
CNTN2-231	ENST00000640352	ADGB	Q8N7X0	1667 aa		10.87	□□□□□ -0.67
CNTN2-231	ENST00000640352	WWC1	Q8IX03	1113 aa		10.86	□□□□□ -0.67
CNTN2-231	ENST00000640352	AGL	P35573	1532 aa		10.86	□□□□□ -0.67
CNTN2-231	ENST00000640352	CASC1	Q6TDU7	716 aa		10.86	□□□□□ -0.67
CNTN2-231	ENST00000640352	CARD14	Q9BXL6	1004 aa		10.86	□□□□□ -0.67
CNTN2-231	ENST00000640352	USP19	O94966	1318 aa		10.86	□□□□□ -0.67
CNTN2-231	ENST00000640352	CERK	Q8TCT0	537 aa		10.86	□□□□□ -0.67
CNTN2-231	ENST00000640352	ZNF526	Q8TF50	670 aa	Predicted RBP	10.86	□□□□□ -0.67
CNTN2-231	ENST00000640352	TSR2	Q969E8	191 aa	Known RBP	10.86	□□□□□ -0.67
CNTN2-231	ENST00000640352	RRAGD	Q9NQL2	400 aa	Predicted RBP	10.86	□□□□□ -0.67
CNTN2-231	ENST00000640352	TCP11L2	Q8N4U5	519 aa		10.85	□□□□□ -0.67
CNTN2-231	ENST00000640352	CHMP4A	Q9BY43	222 aa		10.85	□□□□□ -0.67
CNTN2-231	ENST00000640352	CHMP5	Q9NZZ3	219 aa		10.85	□□□□□ -0.67
CNTN2-231	ENST00000640352	ELL2	O00472	640 aa	Predicted RBP	10.85	□□□□□ -0.67
CNTN2-231	ENST00000640352	BRD2	P25440	801 aa	Known RBP	10.85	□□□□□ -0.67
CNTN2-231	ENST00000640352	ZKSCAN2	Q63HK3	967 aa		10.85	□□□□□ -0.67
CNTN2-231	ENST00000640352	TBC1D2	Q9BYX2	928 aa		10.85	□□□□□ -0.67
CNTN2-231	ENST00000640352	ZHX1	Q9UKY1	873 aa	Predicted RBP	10.84	□□□□□ -0.67
CNTN2-231	ENST00000640352	MRE11	P49959	708 aa		10.84	□□□□□ -0.67
CNTN2-231	ENST00000640352	ZNF521	Q96K83	1311 aa		10.84	□□□□□ -0.67
CNTN2-231	ENST00000640352	PLXNC1	O60486	1568 aa		10.84	□□□□□ -0.67
CNTN2-231	ENST00000640352	TRAK2	O60296	914 aa		10.83	□□□□□ -0.68
CNTN2-231	ENST00000640352	FAM182B	Q5T319	152 aa		10.83	□□□□□ -0.68
CNTN2-231	ENST00000640352	RUNDC1	Q96C34	613 aa		10.83	□□□□□ -0.68
CNTN2-231	ENST00000640352	DDX49	Q9Y6V7	483 aa	Known RBP	10.83	□□□□□ -0.68
CNTN2-231	ENST00000640352	FER1L4	A9Z1Z3	1794 aa		10.83	□□□□□ -0.68
CNTN2-231	ENST00000640352	CALD1	Q05682	793 aa	Known RBP	10.83	□□□□□ -0.68
CNTN2-231	ENST00000640352	PDE3A	Q14432	1141 aa		10.83	□□□□□ -0.68
CNTN2-231	ENST00000640352	HSPA1L	P34931	641 aa		10.82	□□□□□ -0.68
CNTN2-231	ENST00000640352	SETD1B	Q9UPS6	1966 aa	Known RBP	10.82	□□□□□ -0.68
CNTN2-231	ENST00000640352	NECTIN2	Q92692	538 aa		10.81	□□□□□ -0.68
CNTN2-231	ENST00000640352	NKTR	P30414	1462 aa	Known RBP	10.81	□□□□□ -0.68
CNTN2-231	ENST00000640352	CAMSAP1	Q5T5Y3	1602 aa		10.81	□□□□□ -0.68
CNTN2-231	ENST00000640352	RARS	P54136	660 aa	Known RBP	10.81	□□□□□ -0.68
CNTN2-231	ENST00000640352	LRRC59	Q96AG4	307 aa	Known RBP	10.81	□□□□□ -0.68
CNTN2-231	ENST00000640352	NLRP1	Q9C000	1473 aa		10.81	□□□□□ -0.68
CNTN2-231	ENST00000640352	NPHP3	Q7Z494	1330 aa		10.81	□□□□□ -0.68
CNTN2-231	ENST00000640352	HSP90AB2P	Q58FF8	381 aa		10.81	□□□□□ -0.68
CNTN2-231	ENST00000640352	DZIP1L	Q8IYY4	767 aa	Known RBP	10.81	□□□□□ -0.68
CNTN2-231	ENST00000640352	PLEKHG1	Q9ULL1	1385 aa		10.8	□□□□□ -0.68
CNTN2-231	ENST00000640352	PRR36	Q9H6K5	1346 aa		10.8	□□□□□ -0.68
CNTN2-231	ENST00000640352	NSD3	Q9BZ95	1437 aa		10.8	□□□□□ -0.68
CNTN2-231	ENST00000640352	CFAP44	Q96MT7	982 aa		10.8	□□□□□ -0.68
CNTN2-231	ENST00000640352	PTPRT	O14522	1441 aa		10.8	□□□□□ -0.68
CNTN2-231	ENST00000640352	BRINP3	Q76B58	766 aa		10.8	□□□□□ -0.68
CNTN2-231	ENST00000640352	ZNF692	Q9BU19	519 aa	Predicted RBP	10.8	□□□□□ -0.68
CNTN2-231	ENST00000640352	SULT6B1	Q6IMI4	303 aa		10.79	□□□□□ -0.68
CNTN2-231	ENST00000640352	PPIP5K1	Q6PFW1	1433 aa		10.79	□□□□□ -0.68
CNTN2-231	ENST00000640352	XRCC6	P12956	609 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
CNTN2-231	ENST00000640352	C22orf23	Q9BZE7	217 aa		10.79	□□□□□ -0.68
CNTN2-231	ENST00000640352	ARHGAP31	Q2M1Z3	1444 aa		10.79	□□□□□ -0.68
CNTN2-231	ENST00000640352	ESPN	B1AK53	854 aa		10.79	□□□□□ -0.68
CNTN2-231	ENST00000640352	DDX19B	Q9UMR2	479 aa		10.79	□□□□□ -0.68
CNTN2-231	ENST00000640352	CROCC2	H7BZ55	1655 aa		10.79	□□□□□ -0.68
CNTN2-231	ENST00000640352	FYB1	O15117	783 aa		10.78	□□□□□ -0.68
CNTN2-231	ENST00000640352	RAPGEF4	Q8WZA2	1011 aa		10.78	□□□□□ -0.68
CNTN2-231	ENST00000640352	BTG4	Q9NY30	223 aa		10.78	□□□□□ -0.68
CNTN2-231	ENST00000640352	VGLL3	A8MV65	326 aa		10.78	□□□□□ -0.68
CNTN2-231	ENST00000640352	LNPK	Q9C0E8	428 aa		10.78	□□□□□ -0.68
CNTN2-231	ENST00000640352	SKOR2	Q2VWA4	1001 aa	Predicted RBP	10.78	□□□□□ -0.68
CNTN2-231	ENST00000640352	TRMT2A	Q8IZ69	625 aa	Known RBP	10.78	□□□□□ -0.68
CNTN2-231	ENST00000640352	TTC21B	Q7Z4L5	1316 aa		10.78	□□□□□ -0.68
CNTN2-231	ENST00000640352	DIAPH1	O60610	1272 aa	Known RBP	10.77	□□□□□ -0.68
CNTN2-231	ENST00000640352	KIAA2012	Q0VF49	1180 aa		10.77	□□□□□ -0.68
CNTN2-231	ENST00000640352	RTF1	Q92541	710 aa	Known RBP	10.77	□□□□□ -0.68
CNTN2-231	ENST00000640352	CLTCL1	P53675	1640 aa		10.77	□□□□□ -0.69
CNTN2-231	ENST00000640352	TRPM1	Q7Z4N2	1603 aa		10.77	□□□□□ -0.69
CNTN2-231	ENST00000640352	GC	P02774	474 aa		10.77	□□□□□ -0.69
CNTN2-231	ENST00000640352	MCM4	P33991	863 aa		10.77	□□□□□ -0.69
CNTN2-231	ENST00000640352	CHAF1A	Q13111	956 aa	Predicted RBP	10.77	□□□□□ -0.69
CNTN2-231	ENST00000640352	APBB1	O00213	710 aa		10.77	□□□□□ -0.69
CNTN2-231	ENST00000640352	ZNF771	Q7L3S4	317 aa	Predicted RBP	10.77	□□□□□ -0.69
CNTN2-231	ENST00000640352	PRDM10	Q9NQV6	1147 aa		10.77	□□□□□ -0.69
CNTN2-231	ENST00000640352	R3HCC1	Q9Y3T6	440 aa	Known RBP	10.77	□□□□□ -0.69
CNTN2-231	ENST00000640352	ATAD2	Q6PL18	1390 aa		10.77	□□□□□ -0.69
CNTN2-231	ENST00000640352	RNF17	Q9BXT8	1623 aa	Known RBP	10.76	□□□□□ -0.69
CNTN2-231	ENST00000640352	EXOSC9	Q06265	439 aa	Known RBP	10.76	□□□□□ -0.69
CNTN2-231	ENST00000640352	C1orf115	Q9H7X2	142 aa		10.76	□□□□□ -0.69
CNTN2-231	ENST00000640352		E9PCH4	1651 aa		10.76	□□□□□ -0.69
CNTN2-231	ENST00000640352	TBC1D32	Q96NH3	1257 aa		10.76	□□□□□ -0.69
CNTN2-231	ENST00000640352	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.76	□□□□□ -0.69
CNTN2-231	ENST00000640352	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.76	□□□□□ -0.69
CNTN2-231	ENST00000640352	GRPEL1	Q9HAV7	217 aa		10.76	□□□□□ -0.69
CNTN2-231	ENST00000640352	SIGLEC1	Q9BZZ2	1709 aa		10.76	□□□□□ -0.69
CNTN2-231	ENST00000640352	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	10.75	□□□□□ -0.69
CNTN2-231	ENST00000640352	THUMPD2	Q9BTF0	503 aa	Known RBP	10.75	□□□□□ -0.69
CNTN2-231	ENST00000640352	NASP	P49321	788 aa	Predicted RBP	10.75	□□□□□ -0.69
CNTN2-231	ENST00000640352	ANKRD45	Q5TZF3	282 aa		10.75	□□□□□ -0.69
CNTN2-231	ENST00000640352	ABCC11	Q96J66	1382 aa		10.75	□□□□□ -0.69
CNTN2-231	ENST00000640352	TPM2	P07951	284 aa		10.74	□□□□□ -0.69
CNTN2-231	ENST00000640352	DCTN1	Q14203	1278 aa		10.74	□□□□□ -0.69
CNTN2-231	ENST00000640352	ACSBG1	Q96GR2	724 aa		10.74	□□□□□ -0.69
CNTN2-231	ENST00000640352	TRPM2	O94759	1503 aa		10.74	□□□□□ -0.69
CNTN2-231	ENST00000640352	ANTXR1	Q9H6X2	564 aa		10.74	□□□□□ -0.69
CNTN2-231	ENST00000640352	NPHP1	O15259	732 aa		10.74	□□□□□ -0.69
CNTN2-231	ENST00000640352	PRKAR2B	P31323	418 aa		10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms