RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 MAGEC2Q9UBF1 373 aaPredicted RBP17.54■□□□□ 0.4
HNRNPU-226ENST00000640218 THEMISQ8N1K5 641 aaPredicted RBP17.53■□□□□ 0.4
HNRNPU-226ENST00000640218 HFM1A2PYH4 1435 aa17.53■□□□□ 0.4
HNRNPU-226ENST00000640218 HSP90B2PQ58FF3 399 aa17.53■□□□□ 0.4
HNRNPU-226ENST00000640218 RBM5P52756 815 aaKnown RBP eCLIP17.53■□□□□ 0.42e-11■■■■□ 22.2
HNRNPU-226ENST00000640218 FILIP1LQ4L180 1135 aa17.53■□□□□ 0.4
HNRNPU-226ENST00000640218 CYP46A1Q9Y6A2 500 aa17.53■□□□□ 0.4
HNRNPU-226ENST00000640218 SRCIN1Q9C0H9 1055 aa17.53■□□□□ 0.4
HNRNPU-226ENST00000640218 KRT18P05783 430 aaKnown RBP17.52■□□□□ 0.4
HNRNPU-226ENST00000640218 SPG7Q9UQ90 795 aa17.52■□□□□ 0.4
HNRNPU-226ENST00000640218 PNISRQ8TF01 805 aaKnown RBP17.52■□□□□ 0.4
HNRNPU-226ENST00000640218 KIAA1107Q9UPP5 1409 aa17.51■□□□□ 0.39
HNRNPU-226ENST00000640218 RTEL1-TNFRSF6BF6WH68 1400 aa17.51■□□□□ 0.39
HNRNPU-226ENST00000640218 AKNAQ7Z591 1439 aa17.51■□□□□ 0.39
HNRNPU-226ENST00000640218 NBPF8Q3BBV2 869 aa17.51■□□□□ 0.39
HNRNPU-226ENST00000640218 RRS1Q15050 365 aaKnown RBP17.51■□□□□ 0.39
HNRNPU-226ENST00000640218 SMARCE1Q969G3 411 aa17.5■□□□□ 0.39
HNRNPU-226ENST00000640218 CCDC57Q2TAC2 916 aa17.5■□□□□ 0.39
HNRNPU-226ENST00000640218 ATF7IPQ6VMQ6 1270 aa17.5■□□□□ 0.39
HNRNPU-226ENST00000640218 WDR63Q8IWG1 891 aa17.5■□□□□ 0.39
HNRNPU-226ENST00000640218 MPHOSPH8Q99549 860 aa17.5■□□□□ 0.39
HNRNPU-226ENST00000640218 FKBP4Q02790 459 aaKnown RBP eCLIP17.49■□□□□ 0.393e-7■■■■□ 19.6
HNRNPU-226ENST00000640218 TTLL12Q14166 644 aaPredicted RBP17.49■□□□□ 0.39
HNRNPU-226ENST00000640218 NACAP1Q9BZK3 213 aa17.49■□□□□ 0.39
HNRNPU-226ENST00000640218 XPCQ01831 940 aaPredicted RBP17.49■□□□□ 0.39
HNRNPU-226ENST00000640218 C16orf71Q8IYS4 520 aaPredicted RBP17.49■□□□□ 0.39
HNRNPU-226ENST00000640218 CCDC69A6NI79 296 aa17.49■□□□□ 0.39
HNRNPU-226ENST00000640218 CHMP4BP1P59074 171 aa17.49■□□□□ 0.39
HNRNPU-226ENST00000640218 SPC24Q8NBT2 197 aa17.49■□□□□ 0.39
HNRNPU-226ENST00000640218 SLC26A8Q96RN1 970 aa17.49■□□□□ 0.39
HNRNPU-226ENST00000640218 ZNF219Q9P2Y4 722 aaPredicted RBP17.49■□□□□ 0.39
HNRNPU-226ENST00000640218 ARAP1Q96P48 1450 aa17.49■□□□□ 0.39
HNRNPU-226ENST00000640218 ERBINQ96RT1 1412 aa17.48■□□□□ 0.39
HNRNPU-226ENST00000640218 ANKRD1Q15327 319 aa17.48■□□□□ 0.39
HNRNPU-226ENST00000640218 SKIDA1Q1XH10 827 aa17.48■□□□□ 0.39
HNRNPU-226ENST00000640218 AACSQ86V21 672 aa17.48■□□□□ 0.39
HNRNPU-226ENST00000640218 BTBD11A6QL63 1104 aa17.48■□□□□ 0.39
HNRNPU-226ENST00000640218 NUP133Q8WUM0 1156 aa17.48■□□□□ 0.39
HNRNPU-226ENST00000640218 TRIM22Q8IYM9 498 aa17.48■□□□□ 0.39
HNRNPU-226ENST00000640218 MVPQ14764 893 aaKnown RBP17.47■□□□□ 0.39
HNRNPU-226ENST00000640218 WWC3Q9ULE0 1092 aa17.47■□□□□ 0.39
HNRNPU-226ENST00000640218 JMYQ8N9B5 988 aa17.47■□□□□ 0.39
HNRNPU-226ENST00000640218 CHD1LQ86WJ1 897 aa17.46■□□□□ 0.39
HNRNPU-226ENST00000640218 EHBP1L1Q8N3D4 1523 aa17.46■□□□□ 0.39
HNRNPU-226ENST00000640218 ME1P48163 572 aa17.46■□□□□ 0.39
HNRNPU-226ENST00000640218 BICDL1Q6ZP65 573 aa17.46■□□□□ 0.39
HNRNPU-226ENST00000640218 SLC52A1Q9NWF4 448 aa17.46■□□□□ 0.39
HNRNPU-226ENST00000640218 SRGAP3O43295 1099 aa17.46■□□□□ 0.39
HNRNPU-226ENST00000640218 SYCP1Q15431 976 aa17.46■□□□□ 0.39
HNRNPU-226ENST00000640218 WWC2Q6AWC2 1192 aa17.46■□□□□ 0.39
HNRNPU-226ENST00000640218 AEBP1Q8IUX7 1158 aa17.46■□□□□ 0.39
HNRNPU-226ENST00000640218 PAF1Q8N7H5 531 aa17.46■□□□□ 0.39
HNRNPU-226ENST00000640218 ERICH3Q5RHP9 1530 aa17.46■□□□□ 0.39
HNRNPU-226ENST00000640218 SERPINC1P01008 464 aa17.46■□□□□ 0.39
HNRNPU-226ENST00000640218 ZHX3Q9H4I2 956 aa17.46■□□□□ 0.38
HNRNPU-226ENST00000640218 CT47B1P0C2W7 299 aaPredicted RBP17.45■□□□□ 0.38
HNRNPU-226ENST00000640218 PLEKHH2Q8IVE3 1493 aa17.45■□□□□ 0.38
HNRNPU-226ENST00000640218 K7ELQ4 463 aaPredicted RBP17.45■□□□□ 0.38
HNRNPU-226ENST00000640218 ZSCAN25Q6NSZ9 544 aa17.44■□□□□ 0.38
HNRNPU-226ENST00000640218 TNMDQ9H2S6 317 aa17.44■□□□□ 0.38
HNRNPU-226ENST00000640218 RDXP35241 583 aaKnown RBP17.44■□□□□ 0.38
HNRNPU-226ENST00000640218 PPM1FP49593 454 aaPredicted RBP17.44■□□□□ 0.38
HNRNPU-226ENST00000640218 NGLY1Q96IV0 654 aa17.44■□□□□ 0.38
HNRNPU-226ENST00000640218 MYO6Q9UM54 1294 aa17.44■□□□□ 0.38
HNRNPU-226ENST00000640218 LARP1BQ659C4 914 aaKnown RBP17.44■□□□□ 0.38
HNRNPU-226ENST00000640218 CWC27Q6UX04 472 aaKnown RBP17.44■□□□□ 0.38
HNRNPU-226ENST00000640218 SPDYE4A6NLX3 237 aa17.44■□□□□ 0.38
HNRNPU-226ENST00000640218 RAPGEF3O95398 923 aa17.44■□□□□ 0.38
HNRNPU-226ENST00000640218 PIP4K2AP48426 406 aaPredicted RBP17.44■□□□□ 0.38
HNRNPU-226ENST00000640218 ERCC4Q92889 916 aaPredicted RBP17.44■□□□□ 0.38
HNRNPU-226ENST00000640218 PRDM11Q9NQV5 511 aa17.44■□□□□ 0.38
HNRNPU-226ENST00000640218 IL1RAPL2Q9NP60 686 aa17.43■□□□□ 0.38
HNRNPU-226ENST00000640218 WDR33Q9C0J8 1336 aaKnown RBP17.43■□□□□ 0.38
HNRNPU-226ENST00000640218 ANKLE2Q86XL3 938 aa17.43■□□□□ 0.38
HNRNPU-226ENST00000640218 SPINK5Q9NQ38 1064 aaPredicted RBP17.43■□□□□ 0.38
HNRNPU-226ENST00000640218 CCP110O43303 1012 aa17.43■□□□□ 0.38
HNRNPU-226ENST00000640218 CCDC192P0DO97 292 aa17.42■□□□□ 0.38
HNRNPU-226ENST00000640218 BLOC1S2Q6QNY1 142 aa17.42■□□□□ 0.38
HNRNPU-226ENST00000640218 SOGA3Q5TF21 947 aa17.42■□□□□ 0.38
HNRNPU-226ENST00000640218 ZNHIT6Q9NWK9 470 aaKnown RBP17.42■□□□□ 0.38
HNRNPU-226ENST00000640218 NCAPD3P42695 1498 aa17.42■□□□□ 0.38
HNRNPU-226ENST00000640218 KRT85P78386 507 aa17.42■□□□□ 0.38
HNRNPU-226ENST00000640218 CCDC85AQ96PX6 553 aaPredicted RBP17.41■□□□□ 0.38
HNRNPU-226ENST00000640218 TDO2P48775 406 aa17.41■□□□□ 0.38
HNRNPU-226ENST00000640218 JAKMIP1Q96N16 626 aaKnown RBP17.41■□□□□ 0.38
HNRNPU-226ENST00000640218 PDRG1Q9NUG6 133 aa17.41■□□□□ 0.38
HNRNPU-226ENST00000640218 CEP126Q9P2H0 1117 aa17.41■□□□□ 0.38
HNRNPU-226ENST00000640218 STIM1Q13586 685 aa17.4■□□□□ 0.38
HNRNPU-226ENST00000640218 TANGO6Q9C0B7 1094 aa17.4■□□□□ 0.38
HNRNPU-226ENST00000640218 ZC3H6P61129 1189 aaKnown RBP17.4■□□□□ 0.38
HNRNPU-226ENST00000640218 NOM1Q5C9Z4 860 aaKnown RBP17.4■□□□□ 0.38
HNRNPU-226ENST00000640218 PPFIBP1Q86W92 1011 aa17.4■□□□□ 0.38
HNRNPU-226ENST00000640218 MIS18AQ9NYP9 233 aa17.4■□□□□ 0.38
HNRNPU-226ENST00000640218 MPNDQ8N594 471 aa17.4■□□□□ 0.38
HNRNPU-226ENST00000640218 ECM2O94769 699 aaPredicted RBP17.39■□□□□ 0.38
HNRNPU-226ENST00000640218 DACH1Q9UI36 760 aa17.39■□□□□ 0.38
HNRNPU-226ENST00000640218 HECW1Q76N89 1606 aa17.39■□□□□ 0.37
HNRNPU-226ENST00000640218 RAI14Q9P0K7 980 aa17.39■□□□□ 0.37
HNRNPU-226ENST00000640218 EFCAB5A4FU69 1503 aa17.39■□□□□ 0.37
HNRNPU-226ENST00000640218 FCHSD2O94868 740 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms