RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 NBPF15Q8N660 670 aa5.92□□□□□ -1.46
CCDC7-213ENST00000639290 ZC3H4Q9UPT8 1303 aaKnown RBP5.91□□□□□ -1.46
CCDC7-213ENST00000639290 ZBTB22O15209 634 aa5.91□□□□□ -1.46
CCDC7-213ENST00000639290 SLC17A8Q8NDX2 589 aa5.91□□□□□ -1.46
CCDC7-213ENST00000639290 PMFBP1Q8TBY8 1022 aa5.91□□□□□ -1.46
CCDC7-213ENST00000639290 TRPM1Q7Z4N2 1603 aa5.91□□□□□ -1.46
CCDC7-213ENST00000639290 LBX1P52954 281 aa5.9□□□□□ -1.46
CCDC7-213ENST00000639290 BTG4Q9NY30 223 aa5.9□□□□□ -1.46
CCDC7-213ENST00000639290 PDE4DIPQ5VU43 2346 aa5.9□□□□□ -1.46
CCDC7-213ENST00000639290 TXNRD1Q16881 649 aa5.9□□□□□ -1.47
CCDC7-213ENST00000639290 CRYBG1Q9Y4K1 1723 aa5.9□□□□□ -1.47
CCDC7-213ENST00000639290 MEGF6O75095 1541 aa5.89□□□□□ -1.47
CCDC7-213ENST00000639290 MAP2K1Q02750 393 aaPredicted RBP5.89□□□□□ -1.47
CCDC7-213ENST00000639290 PROM2Q8N271 834 aa5.89□□□□□ -1.47
CCDC7-213ENST00000639290 HMGB2P26583 209 aaKnown RBP5.89□□□□□ -1.47
CCDC7-213ENST00000639290 FXR1P51114 621 aaKnown RBP eCLIP5.89□□□□□ -1.47
CCDC7-213ENST00000639290 NMRK2Q9NPI5 230 aa5.89□□□□□ -1.47
CCDC7-213ENST00000639290 PIK3C2AO00443 1686 aa5.88□□□□□ -1.47
CCDC7-213ENST00000639290 TSPY4P0CV99 314 aa5.88□□□□□ -1.47
CCDC7-213ENST00000639290 TSPY10P0CW01 314 aa5.88□□□□□ -1.47
CCDC7-213ENST00000639290 ANKRD30BQ9BXX2 1392 aa5.88□□□□□ -1.47
CCDC7-213ENST00000639290 SSH2Q76I76 1423 aa5.87□□□□□ -1.47
CCDC7-213ENST00000639290 FMN2Q9NZ56 1722 aa5.87□□□□□ -1.47
CCDC7-213ENST00000639290 NHSQ6T4R5 1651 aa5.87□□□□□ -1.47
CCDC7-213ENST00000639290 EEA1Q15075 1411 aa5.86□□□□□ -1.47
CCDC7-213ENST00000639290 LRRC37A3O60309 1634 aa5.86□□□□□ -1.47
CCDC7-213ENST00000639290 ALS2Q96Q42 1657 aa5.86□□□□□ -1.47
CCDC7-213ENST00000639290 ESCO1Q5FWF5 840 aa5.86□□□□□ -1.47
CCDC7-213ENST00000639290 PHRF1Q9P1Y6 1649 aaKnown RBP5.86□□□□□ -1.47
CCDC7-213ENST00000639290 CA12O43570 354 aa5.85□□□□□ -1.47
CCDC7-213ENST00000639290 AKT1S1Q96B36 256 aa5.85□□□□□ -1.47
CCDC7-213ENST00000639290 AKAP12Q02952 1782 aa5.85□□□□□ -1.47
CCDC7-213ENST00000639290 KRT28Q7Z3Y7 464 aa5.85□□□□□ -1.47
CCDC7-213ENST00000639290 KLHL34Q8N239 644 aa5.85□□□□□ -1.47
CCDC7-213ENST00000639290 TECPR2O15040 1411 aa5.85□□□□□ -1.47
CCDC7-213ENST00000639290 CEP162Q5TB80 1403 aa5.85□□□□□ -1.47
CCDC7-213ENST00000639290 NRXN1Q9ULB1 1477 aa5.84□□□□□ -1.47
CCDC7-213ENST00000639290 PLA2G5P39877 138 aa5.84□□□□□ -1.47
CCDC7-213ENST00000639290 TCP11L2Q8N4U5 519 aa5.84□□□□□ -1.47
CCDC7-213ENST00000639290 WNK3Q9BYP7 1800 aa5.84□□□□□ -1.47
CCDC7-213ENST00000639290 TRPM3Q9HCF6 1732 aaPredicted RBP5.84□□□□□ -1.47
CCDC7-213ENST00000639290 METP08581 1390 aa5.84□□□□□ -1.47
CCDC7-213ENST00000639290 FOXO3O43524 673 aa5.84□□□□□ -1.47
CCDC7-213ENST00000639290 SNX27Q96L92 541 aa5.84□□□□□ -1.47
CCDC7-213ENST00000639290 MCOLN1Q9GZU1 580 aa5.84□□□□□ -1.47
CCDC7-213ENST00000639290 ATP1B4Q9UN42 357 aaPredicted RBP5.84□□□□□ -1.47
CCDC7-213ENST00000639290 KNDC1Q76NI1 1749 aa5.83□□□□□ -1.48
CCDC7-213ENST00000639290 SPATA31E1Q6ZUB1 1445 aa5.83□□□□□ -1.48
CCDC7-213ENST00000639290 CDCA7Q9BWT1 371 aaPredicted RBP5.83□□□□□ -1.48
CCDC7-213ENST00000639290 PRDM6Q9NQX0 595 aa5.83□□□□□ -1.48
CCDC7-213ENST00000639290 KIAA0232Q92628 1395 aa5.82□□□□□ -1.48
CCDC7-213ENST00000639290 COL18A1P39060 1754 aa5.82□□□□□ -1.48
CCDC7-213ENST00000639290 TUBGCP6Q96RT7 1819 aa5.82□□□□□ -1.48
CCDC7-213ENST00000639290 SLC27A3Q5K4L6 730 aa5.82□□□□□ -1.48
CCDC7-213ENST00000639290 QRICH2Q9H0J4 1663 aa5.82□□□□□ -1.48
CCDC7-213ENST00000639290 KCPQ6ZWJ8 1503 aa5.81□□□□□ -1.48
CCDC7-213ENST00000639290 CLTCL1P53675 1640 aa5.81□□□□□ -1.48
CCDC7-213ENST00000639290 CFAP44Q96MT7 982 aa5.81□□□□□ -1.48
CCDC7-213ENST00000639290 ARIH1Q9Y4X5 557 aaPredicted RBP5.81□□□□□ -1.48
CCDC7-213ENST00000639290 KIF13BQ9NQT8 1826 aa5.81□□□□□ -1.48
CCDC7-213ENST00000639290 IGSF1Q8N6C5 1336 aa5.81□□□□□ -1.48
CCDC7-213ENST00000639290 PNPLA7Q6ZV29 1317 aa5.8□□□□□ -1.48
CCDC7-213ENST00000639290 ROBO2Q9HCK4 1378 aa5.8□□□□□ -1.48
CCDC7-213ENST00000639290 YTHDC2Q9H6S0 1430 aaKnown RBP5.8□□□□□ -1.48
CCDC7-213ENST00000639290 LMO7Q8WWI1 1683 aa5.8□□□□□ -1.48
CCDC7-213ENST00000639290 LTBP1Q14766 1721 aa5.8□□□□□ -1.48
CCDC7-213ENST00000639290 ARFGEF1Q9Y6D6 1849 aa5.8□□□□□ -1.48
CCDC7-213ENST00000639290 VEGFAP15692 232 aaPredicted RBP5.8□□□□□ -1.48
CCDC7-213ENST00000639290 SYNGAP1Q96PV0 1343 aa5.8□□□□□ -1.48
CCDC7-213ENST00000639290 ZNF644Q9H582 1327 aaPredicted RBP5.8□□□□□ -1.48
CCDC7-213ENST00000639290 NAIPQ13075 1403 aa5.8□□□□□ -1.48
CCDC7-213ENST00000639290 TNRC18O15417 2968 aaPredicted RBP5.79□□□□□ -1.48
CCDC7-213ENST00000639290 RASSF10A6NK89 507 aa5.79□□□□□ -1.48
CCDC7-213ENST00000639290 MKRN1Q9UHC7 482 aaKnown RBP5.79□□□□□ -1.48
CCDC7-213ENST00000639290 USP6P35125 1406 aa5.79□□□□□ -1.48
CCDC7-213ENST00000639290 VEGFBP49765 207 aa5.79□□□□□ -1.48
CCDC7-213ENST00000639290 FAM122AQ96E09 287 aa5.79□□□□□ -1.48
CCDC7-213ENST00000639290 BEGAINQ9BUH8 593 aa5.79□□□□□ -1.48
CCDC7-213ENST00000639290 RRAGCQ9HB90 399 aa5.78□□□□□ -1.48
CCDC7-213ENST00000639290 ZNF827Q17R98 1081 aa5.78□□□□□ -1.48
CCDC7-213ENST00000639290 PRDM11Q9NQV5 511 aa5.78□□□□□ -1.48
CCDC7-213ENST00000639290 PPEF1O14829 653 aaPredicted RBP5.77□□□□□ -1.49
CCDC7-213ENST00000639290 XPCQ01831 940 aaPredicted RBP5.77□□□□□ -1.49
CCDC7-213ENST00000639290 FLAD1Q8NFF5 587 aa5.77□□□□□ -1.49
CCDC7-213ENST00000639290 KIAA1551Q9HCM1 1747 aa5.77□□□□□ -1.49
CCDC7-213ENST00000639290 ANKARQ7Z5J8 1434 aa5.77□□□□□ -1.49
CCDC7-213ENST00000639290 CABLES1Q8TDN4 633 aa5.77□□□□□ -1.49
CCDC7-213ENST00000639290 CPDO75976 1380 aa5.76□□□□□ -1.49
CCDC7-213ENST00000639290 KDM6AO15550 1401 aaPredicted RBP5.76□□□□□ -1.49
CCDC7-213ENST00000639290 IFT172Q9UG01 1749 aa5.76□□□□□ -1.49
CCDC7-213ENST00000639290 PASKQ96RG2 1323 aa5.76□□□□□ -1.49
CCDC7-213ENST00000639290 SPDYE2BA6NHP3 402 aa5.76□□□□□ -1.49
CCDC7-213ENST00000639290 SPDYE6P0CI01 402 aa5.76□□□□□ -1.49
CCDC7-213ENST00000639290 DGKZQ13574 1117 aa5.76□□□□□ -1.49
CCDC7-213ENST00000639290 SPDYE2Q495Y8 402 aa5.76□□□□□ -1.49
CCDC7-213ENST00000639290 CHADLQ6NUI6 762 aa5.76□□□□□ -1.49
CCDC7-213ENST00000639290 CRB1P82279 1406 aa5.76□□□□□ -1.49
CCDC7-213ENST00000639290 USP54Q70EL1 1684 aa5.75□□□□□ -1.49
CCDC7-213ENST00000639290 HAX1O00165 279 aa5.75□□□□□ -1.49
CCDC7-213ENST00000639290 DDB1Q16531 1140 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms