RNA–Protein interactions for RNA: ENST00000638824.1

NEK1-209, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 3,642 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-209ENST00000638824 NSD3Q9BZ95 1437 aa4.02□□□□□ -1.77
NEK1-209ENST00000638824 ANKRD36BQ8N2N9 1353 aa4.02□□□□□ -1.77
NEK1-209ENST00000638824 PLEKHG3A1L390 1219 aa4.02□□□□□ -1.77
NEK1-209ENST00000638824 NPHP3Q7Z494 1330 aa4.01□□□□□ -1.77
NEK1-209ENST00000638824 USP54Q70EL1 1684 aa4.01□□□□□ -1.77
NEK1-209ENST00000638824 PAK3O75914 559 aaPredicted RBP4.01□□□□□ -1.77
NEK1-209ENST00000638824 VASPP50552 380 aaPredicted RBP4.01□□□□□ -1.77
NEK1-209ENST00000638824 PSME1Q06323 249 aa4.01□□□□□ -1.77
NEK1-209ENST00000638824 CDCA8Q53HL2 280 aa4.01□□□□□ -1.77
NEK1-209ENST00000638824 NUTM2GQ5VZR2 741 aa4.01□□□□□ -1.77
NEK1-209ENST00000638824 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.01□□□□□ -1.77
NEK1-209ENST00000638824 FBXO41Q8TF61 875 aa4.01□□□□□ -1.77
NEK1-209ENST00000638824 COL22A1Q8NFW1 1626 aaPredicted RBP4.01□□□□□ -1.77
NEK1-209ENST00000638824 TNS3Q68CZ2 1445 aa4.01□□□□□ -1.77
NEK1-209ENST00000638824 LTN1O94822 1766 aa4.01□□□□□ -1.77
NEK1-209ENST00000638824 MED1Q15648 1581 aaPredicted RBP4.01□□□□□ -1.77
NEK1-209ENST00000638824 NINLQ9Y2I6 1382 aa4.01□□□□□ -1.77
NEK1-209ENST00000638824 ZNF316A6NFI3 1004 aaPredicted RBP4.01□□□□□ -1.77
NEK1-209ENST00000638824 POTEB2H3BUK9 544 aa4.01□□□□□ -1.77
NEK1-209ENST00000638824 CNGB1Q14028 1251 aaPredicted RBP4.01□□□□□ -1.77
NEK1-209ENST00000638824 KRT28Q7Z3Y7 464 aa4.01□□□□□ -1.77
NEK1-209ENST00000638824 CARD14Q9BXL6 1004 aa4.01□□□□□ -1.77
NEK1-209ENST00000638824 CCDC9Q9Y3X0 531 aaKnown RBP4.01□□□□□ -1.77
NEK1-209ENST00000638824 SSH2Q76I76 1423 aa4.01□□□□□ -1.77
NEK1-209ENST00000638824 SOS2Q07890 1332 aaPredicted RBP4.01□□□□□ -1.77
NEK1-209ENST00000638824 EDC4Q6P2E9 1401 aaKnown RBP4.01□□□□□ -1.77
NEK1-209ENST00000638824 LMOD2Q6P5Q4 547 aa4.01□□□□□ -1.77
NEK1-209ENST00000638824 PANK3Q9H999 370 aa4.01□□□□□ -1.77
NEK1-209ENST00000638824 ZRANB1Q9UGI0 708 aa4.01□□□□□ -1.77
NEK1-209ENST00000638824 DDX10Q13206 875 aaKnown RBP4□□□□□ -1.77
NEK1-209ENST00000638824 HDGFL2Q7Z4V5 671 aaPredicted RBP4□□□□□ -1.77
NEK1-209ENST00000638824 NME9Q86XW9 330 aa4□□□□□ -1.77
NEK1-209ENST00000638824 PUS7Q96PZ0 661 aaKnown RBP4□□□□□ -1.77
NEK1-209ENST00000638824 RGPD5Q99666 1765 aa4□□□□□ -1.77
NEK1-209ENST00000638824 PNPLA6Q8IY17 1366 aa4□□□□□ -1.77
NEK1-209ENST00000638824 CABLES1Q8TDN4 633 aa4□□□□□ -1.77
NEK1-209ENST00000638824 TERF2IPQ9NYB0 399 aa4□□□□□ -1.77
NEK1-209ENST00000638824 PCDH10Q9P2E7 1040 aa4□□□□□ -1.77
NEK1-209ENST00000638824 FARP1Q9Y4F1 1045 aaPredicted RBP4□□□□□ -1.77
NEK1-209ENST00000638824 LRP6O75581 1613 aa4□□□□□ -1.77
NEK1-209ENST00000638824 SPATA31A3Q5VYP0 1347 aa4□□□□□ -1.77
NEK1-209ENST00000638824 MAP2P11137 1827 aaKnown RBP4□□□□□ -1.77
NEK1-209ENST00000638824 PLCH1Q4KWH8 1693 aa3.99□□□□□ -1.77
NEK1-209ENST00000638824 TTC21BQ7Z4L5 1316 aa3.99□□□□□ -1.77
NEK1-209ENST00000638824 SOX12O15370 315 aa3.99□□□□□ -1.77
NEK1-209ENST00000638824 SPRYD3Q8NCJ5 442 aa3.99□□□□□ -1.77
NEK1-209ENST00000638824 GGNBP2Q9H3C7 697 aa3.99□□□□□ -1.77
NEK1-209ENST00000638824 SBNO1A3KN83 1393 aa3.99□□□□□ -1.77
NEK1-209ENST00000638824 OVOS2A0A0J9YW53 1432 aa3.99□□□□□ -1.77
NEK1-209ENST00000638824 OVOS2Q6IE36 1432 aa3.99□□□□□ -1.77
NEK1-209ENST00000638824 FOXD4L5Q5VV16 416 aaPredicted RBP3.99□□□□□ -1.77
NEK1-209ENST00000638824 ABTB2Q8N961 1025 aa3.99□□□□□ -1.77
NEK1-209ENST00000638824 FOXD4L4Q8WXT5 416 aaPredicted RBP3.99□□□□□ -1.77
NEK1-209ENST00000638824 PEAK1Q9H792 1746 aa3.99□□□□□ -1.77
NEK1-209ENST00000638824 SLIT3O75094 1523 aa3.99□□□□□ -1.77
NEK1-209ENST00000638824 NFAT5O94916 1531 aa3.99□□□□□ -1.77
NEK1-209ENST00000638824 RGL2O15211 777 aa3.99□□□□□ -1.77
NEK1-209ENST00000638824 ARHGEF10O15013 1369 aa3.98□□□□□ -1.77
NEK1-209ENST00000638824 JCADQ9P266 1359 aa3.98□□□□□ -1.77
NEK1-209ENST00000638824 NUTM2BA6NNL0 878 aaPredicted RBP3.98□□□□□ -1.77
NEK1-209ENST00000638824 NUTM2EB1AL46 878 aaPredicted RBP3.98□□□□□ -1.77
NEK1-209ENST00000638824 PRR29P0C7W0 189 aa3.98□□□□□ -1.77
NEK1-209ENST00000638824 FBLN1P23142 703 aa3.98□□□□□ -1.77
NEK1-209ENST00000638824 NLRP6P59044 892 aa3.98□□□□□ -1.77
NEK1-209ENST00000638824 IRX6P78412 446 aaPredicted RBP3.98□□□□□ -1.77
NEK1-209ENST00000638824 PDE4CQ08493 712 aa3.98□□□□□ -1.77
NEK1-209ENST00000638824 NUTM2AQ8IVF1 878 aaPredicted RBP3.98□□□□□ -1.77
NEK1-209ENST00000638824 LRRC59Q96AG4 307 aaKnown RBP3.98□□□□□ -1.77
NEK1-209ENST00000638824 TTC21AQ8NDW8 1320 aa3.98□□□□□ -1.77
NEK1-209ENST00000638824 RGPD2P0DJD1 1756 aa3.98□□□□□ -1.77
NEK1-209ENST00000638824 FYB1O15117 783 aa3.98□□□□□ -1.77
NEK1-209ENST00000638824 PER1O15534 1290 aaPredicted RBP3.98□□□□□ -1.77
NEK1-209ENST00000638824 TNNT2P45379 298 aaPredicted RBP3.98□□□□□ -1.77
NEK1-209ENST00000638824 CC2D1BQ5T0F9 858 aaKnown RBP3.98□□□□□ -1.77
NEK1-209ENST00000638824 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.98□□□□□ -1.77
NEK1-209ENST00000638824 CGNL1Q0VF96 1302 aa3.98□□□□□ -1.77
NEK1-209ENST00000638824 KNSTRNQ9Y448 316 aa3.97□□□□□ -1.77
NEK1-209ENST00000638824 COL18A1P39060 1754 aa3.97□□□□□ -1.77
NEK1-209ENST00000638824 USP19O94966 1318 aa3.97□□□□□ -1.77
NEK1-209ENST00000638824 LMO7Q8WWI1 1683 aa3.97□□□□□ -1.77
NEK1-209ENST00000638824 NRAPQ86VF7 1730 aa3.97□□□□□ -1.77
NEK1-209ENST00000638824 ADAMTS2O95450 1211 aa3.97□□□□□ -1.77
NEK1-209ENST00000638824 PLSCR2Q9NRY7 297 aa3.97□□□□□ -1.77
NEK1-209ENST00000638824 BRD4O60885 1362 aaPredicted RBP3.97□□□□□ -1.77
NEK1-209ENST00000638824 ZBTB7CA1YPR0 619 aa3.97□□□□□ -1.77
NEK1-209ENST00000638824 COL14A1Q05707 1796 aaKnown RBP3.97□□□□□ -1.77
NEK1-209ENST00000638824 USP31Q70CQ4 1352 aa3.97□□□□□ -1.77
NEK1-209ENST00000638824 GALR2O43603 387 aaPredicted RBP3.96□□□□□ -1.77
NEK1-209ENST00000638824 POTEJP0CG39 1038 aa3.96□□□□□ -1.77
NEK1-209ENST00000638824 ZC3H6P61129 1189 aaKnown RBP3.96□□□□□ -1.77
NEK1-209ENST00000638824 COG3Q96JB2 828 aa3.96□□□□□ -1.77
NEK1-209ENST00000638824 MTMR7Q9Y216 660 aa3.96□□□□□ -1.77
NEK1-209ENST00000638824 KIAA0232Q92628 1395 aa3.96□□□□□ -1.78
NEK1-209ENST00000638824 RRS1Q15050 365 aaKnown RBP3.96□□□□□ -1.78
NEK1-209ENST00000638824 CHRNA2Q15822 529 aa3.96□□□□□ -1.78
NEK1-209ENST00000638824 NLRP13Q86W25 1043 aa3.96□□□□□ -1.78
NEK1-209ENST00000638824 NWD2Q9ULI1 1742 aa3.96□□□□□ -1.78
NEK1-209ENST00000638824 GCP02774 474 aa3.96□□□□□ -1.78
NEK1-209ENST00000638824 EP400Q96L91 3159 aa3.96□□□□□ -1.78
NEK1-209ENST00000638824 NSD2O96028 1365 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms