RNA–Protein interactions for RNA: ENST00000638454.1

PRAMEF13-202, Transcript of PRAME family member 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRAMEF13, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF13-202ENST00000638454 MTHFSP49914 203 aa14.09□□□□□ -0.15
PRAMEF13-202ENST00000638454 RASEFQ8IZ41 740 aa14.09□□□□□ -0.15
PRAMEF13-202ENST00000638454 CREBZFQ9NS37 354 aa14.09□□□□□ -0.15
PRAMEF13-202ENST00000638454 PSME1Q06323 249 aa14.08□□□□□ -0.16
PRAMEF13-202ENST00000638454 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.08□□□□□ -0.16
PRAMEF13-202ENST00000638454 NME9Q86XW9 330 aa14.08□□□□□ -0.16
PRAMEF13-202ENST00000638454 KCNV2Q8TDN2 545 aa14.08□□□□□ -0.16
PRAMEF13-202ENST00000638454 RGPD8O14715 1765 aaPredicted RBP14.07□□□□□ -0.16
PRAMEF13-202ENST00000638454 NGEFQ8N5V2 710 aa14.07□□□□□ -0.16
PRAMEF13-202ENST00000638454 RBM33Q96EV2 1170 aaKnown RBP14.07□□□□□ -0.16
PRAMEF13-202ENST00000638454 PNNQ9H307 717 aaKnown RBP14.07□□□□□ -0.16
PRAMEF13-202ENST00000638454 BLMP54132 1417 aaPredicted RBP14.06□□□□□ -0.16
PRAMEF13-202ENST00000638454 SSH2Q76I76 1423 aa14.05□□□□□ -0.16
PRAMEF13-202ENST00000638454 PAK3O75914 559 aaPredicted RBP14.05□□□□□ -0.16
PRAMEF13-202ENST00000638454 C1orf167Q5SNV9 1468 aa14.05□□□□□ -0.16
PRAMEF13-202ENST00000638454 STRCP1A6NGW2 1772 aa14.05□□□□□ -0.16
PRAMEF13-202ENST00000638454 USP31Q70CQ4 1352 aa14.04□□□□□ -0.16
PRAMEF13-202ENST00000638454 SPDYE1Q8NFV5 336 aaPredicted RBP14.04□□□□□ -0.16
PRAMEF13-202ENST00000638454 OVOS2A0A0J9YW53 1432 aa14.03□□□□□ -0.16
PRAMEF13-202ENST00000638454 OVOS2Q6IE36 1432 aa14.03□□□□□ -0.16
PRAMEF13-202ENST00000638454 LRRC7Q96NW7 1537 aa14.03□□□□□ -0.16
PRAMEF13-202ENST00000638454 DIAPH1O60610 1272 aaKnown RBP14.03□□□□□ -0.16
PRAMEF13-202ENST00000638454 NEFMP07197 916 aa14.03□□□□□ -0.16
PRAMEF13-202ENST00000638454 PYGBP11216 843 aa14.03□□□□□ -0.16
PRAMEF13-202ENST00000638454 ABTB2Q8N961 1025 aa14.03□□□□□ -0.16
PRAMEF13-202ENST00000638454 ADAMTS8Q9UP79 889 aa14.03□□□□□ -0.16
PRAMEF13-202ENST00000638454 ZNF335Q9H4Z2 1342 aaPredicted RBP14.03□□□□□ -0.16
PRAMEF13-202ENST00000638454 MST1RQ04912 1400 aa14.03□□□□□ -0.16
PRAMEF13-202ENST00000638454 CDK12Q9NYV4 1490 aaPredicted RBP14.02□□□□□ -0.16
PRAMEF13-202ENST00000638454 PPM1GO15355 546 aaPredicted RBP14.02□□□□□ -0.17
PRAMEF13-202ENST00000638454 NLRP6P59044 892 aa14.02□□□□□ -0.17
PRAMEF13-202ENST00000638454 PDE3BQ13370 1112 aa14.02□□□□□ -0.17
PRAMEF13-202ENST00000638454 WDR70Q9NW82 654 aa14.02□□□□□ -0.17
PRAMEF13-202ENST00000638454 SMG6Q86US8 1419 aaKnown RBP14.02□□□□□ -0.17
PRAMEF13-202ENST00000638454 NPHP3Q7Z494 1330 aa14.01□□□□□ -0.17
PRAMEF13-202ENST00000638454 U2AF1L5P0DN76 240 aaPredicted RBP14□□□□□ -0.17
PRAMEF13-202ENST00000638454 U2AF1Q01081 240 aaKnown RBP eCLIP14□□□□□ -0.17
PRAMEF13-202ENST00000638454 HOMEZQ8IX15 550 aa14□□□□□ -0.17
PRAMEF13-202ENST00000638454 POLKQ9UBT6 870 aa14□□□□□ -0.17
PRAMEF13-202ENST00000638454 KIF24Q5T7B8 1368 aa14□□□□□ -0.17
PRAMEF13-202ENST00000638454 PNPLA6Q8IY17 1366 aa14□□□□□ -0.17
PRAMEF13-202ENST00000638454 USP54Q70EL1 1684 aa14□□□□□ -0.17
PRAMEF13-202ENST00000638454 U2SURPO15042 1029 aaKnown RBP13.99□□□□□ -0.17
PRAMEF13-202ENST00000638454 KCNH5Q8NCM2 988 aa13.99□□□□□ -0.17
PRAMEF13-202ENST00000638454 ORAI2Q96SN7 254 aa13.99□□□□□ -0.17
PRAMEF13-202ENST00000638454 MAP2P11137 1827 aaKnown RBP13.99□□□□□ -0.17
PRAMEF13-202ENST00000638454 MAPK8IP3Q9UPT6 1336 aa13.98□□□□□ -0.17
PRAMEF13-202ENST00000638454 FOXO3O43524 673 aa13.98□□□□□ -0.17
PRAMEF13-202ENST00000638454 BRPF1P55201 1214 aaPredicted RBP13.98□□□□□ -0.17
PRAMEF13-202ENST00000638454 RUNDC1Q96C34 613 aa13.98□□□□□ -0.17
PRAMEF13-202ENST00000638454 PIK3C2AO00443 1686 aa13.98□□□□□ -0.17
PRAMEF13-202ENST00000638454 KRT28Q7Z3Y7 464 aa13.97□□□□□ -0.17
PRAMEF13-202ENST00000638454 SHPRHQ149N8 1683 aa13.97□□□□□ -0.17
PRAMEF13-202ENST00000638454 COL3A1P02461 1466 aaPredicted RBP13.97□□□□□ -0.17
PRAMEF13-202ENST00000638454 FLT4P35916 1363 aa13.96□□□□□ -0.17
PRAMEF13-202ENST00000638454 PRR29P0C7W0 189 aa13.96□□□□□ -0.17
PRAMEF13-202ENST00000638454 AMPHP49418 695 aa13.96□□□□□ -0.17
PRAMEF13-202ENST00000638454 ZRANB1Q9UGI0 708 aa13.96□□□□□ -0.17
PRAMEF13-202ENST00000638454 SBNO1A3KN83 1393 aa13.96□□□□□ -0.18
PRAMEF13-202ENST00000638454 RRS1Q15050 365 aaKnown RBP13.95□□□□□ -0.18
PRAMEF13-202ENST00000638454 SLAIN2Q9P270 581 aa13.95□□□□□ -0.18
PRAMEF13-202ENST00000638454 CLEC11AQ9Y240 323 aa13.95□□□□□ -0.18
PRAMEF13-202ENST00000638454 EMILIN1Q9Y6C2 1016 aa13.95□□□□□ -0.18
PRAMEF13-202ENST00000638454 XIRP1Q702N8 1843 aaKnown RBP13.95□□□□□ -0.18
PRAMEF13-202ENST00000638454 RTL1A6NKG5 1358 aa13.95□□□□□ -0.18
PRAMEF13-202ENST00000638454 FCHSD2O94868 740 aa13.94□□□□□ -0.18
PRAMEF13-202ENST00000638454 NEFLP07196 543 aa13.94□□□□□ -0.18
PRAMEF13-202ENST00000638454 ARHGEF10O15013 1369 aa13.94□□□□□ -0.18
PRAMEF13-202ENST00000638454 SOX12O15370 315 aa13.93□□□□□ -0.18
PRAMEF13-202ENST00000638454 CCDC146Q8IYE0 955 aa13.93□□□□□ -0.18
PRAMEF13-202ENST00000638454 MAP3K19Q56UN5 1328 aa13.92□□□□□ -0.18
PRAMEF13-202ENST00000638454 APAF1O14727 1248 aa13.91□□□□□ -0.18
PRAMEF13-202ENST00000638454 NUTM2GQ5VZR2 741 aa13.91□□□□□ -0.18
PRAMEF13-202ENST00000638454 SALL2Q9Y467 1007 aaPredicted RBP13.91□□□□□ -0.18
PRAMEF13-202ENST00000638454 TNS3Q68CZ2 1445 aa13.91□□□□□ -0.18
PRAMEF13-202ENST00000638454 TRPM3Q9HCF6 1732 aaPredicted RBP13.91□□□□□ -0.18
PRAMEF13-202ENST00000638454 IL13P35225 146 aa13.9□□□□□ -0.18
PRAMEF13-202ENST00000638454 XPCQ01831 940 aaPredicted RBP13.9□□□□□ -0.18
PRAMEF13-202ENST00000638454 BRINP3Q76B58 766 aa13.9□□□□□ -0.18
PRAMEF13-202ENST00000638454 GOLGA2Q08379 1002 aa13.9□□□□□ -0.19
PRAMEF13-202ENST00000638454 USP19O94966 1318 aa13.89□□□□□ -0.19
PRAMEF13-202ENST00000638454 SLIT3O75094 1523 aa13.89□□□□□ -0.19
PRAMEF13-202ENST00000638454 FBLN1P23142 703 aa13.89□□□□□ -0.19
PRAMEF13-202ENST00000638454 CCDC27Q2M243 656 aa13.89□□□□□ -0.19
PRAMEF13-202ENST00000638454 TCP11L2Q8N4U5 519 aa13.89□□□□□ -0.19
PRAMEF13-202ENST00000638454 LMOD3Q0VAK6 560 aa13.88□□□□□ -0.19
PRAMEF13-202ENST00000638454 PXDNQ92626 1479 aa13.87□□□□□ -0.19
PRAMEF13-202ENST00000638454 ALS2Q96Q42 1657 aa13.87□□□□□ -0.19
PRAMEF13-202ENST00000638454 E9PSI1 815 aa13.87□□□□□ -0.19
PRAMEF13-202ENST00000638454 GCP02774 474 aa13.87□□□□□ -0.19
PRAMEF13-202ENST00000638454 HOXC9P31274 260 aa13.87□□□□□ -0.19
PRAMEF13-202ENST00000638454 CALD1Q05682 793 aaKnown RBP13.87□□□□□ -0.19
PRAMEF13-202ENST00000638454 EIF4A2Q14240 407 aaKnown RBP13.87□□□□□ -0.19
PRAMEF13-202ENST00000638454 ZC3H15Q8WU90 426 aaKnown RBP13.87□□□□□ -0.19
PRAMEF13-202ENST00000638454 IQSEC2Q5JU85 1478 aa13.87□□□□□ -0.19
PRAMEF13-202ENST00000638454 MARF1Q9Y4F3 1742 aaKnown RBP13.86□□□□□ -0.19
PRAMEF13-202ENST00000638454 NFAT5O94916 1531 aa13.86□□□□□ -0.19
PRAMEF13-202ENST00000638454 SPATA31A3Q5VYP0 1347 aa13.86□□□□□ -0.19
PRAMEF13-202ENST00000638454 PRKAR2BP31323 418 aa13.86□□□□□ -0.19
PRAMEF13-202ENST00000638454 HSP90AB2PQ58FF8 381 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms