RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 PSMD1Q99460 953 aa10.7□□□□□ -0.7
SCARB2-209ENST00000638409 LMTK2Q8IWU2 1503 aa10.7□□□□□ -0.7
SCARB2-209ENST00000638409 MARCH6O60337 910 aa10.7□□□□□ -0.7
SCARB2-209ENST00000638409 CCER1Q8TC90 406 aaPredicted RBP10.7□□□□□ -0.7
SCARB2-209ENST00000638409 SCNN1AP37088 669 aa10.69□□□□□ -0.7
SCARB2-209ENST00000638409 ABCC3O15438 1527 aa10.69□□□□□ -0.7
SCARB2-209ENST00000638409 ZC3H4Q9UPT8 1303 aaKnown RBP10.69□□□□□ -0.7
SCARB2-209ENST00000638409 SERPINB4P48594 390 aa10.69□□□□□ -0.7
SCARB2-209ENST00000638409 FOXK1P85037 733 aa10.69□□□□□ -0.7
SCARB2-209ENST00000638409 PLPP6Q8IY26 295 aa10.69□□□□□ -0.7
SCARB2-209ENST00000638409 GJD4Q96KN9 370 aaPredicted RBP10.69□□□□□ -0.7
SCARB2-209ENST00000638409 C3P01024 1663 aa10.68□□□□□ -0.7
SCARB2-209ENST00000638409 TMEM164Q5U3C3 297 aa10.68□□□□□ -0.7
SCARB2-209ENST00000638409 RECKO95980 971 aa10.68□□□□□ -0.7
SCARB2-209ENST00000638409 ESF1Q9H501 851 aaKnown RBP10.68□□□□□ -0.7
SCARB2-209ENST00000638409 USP17L8P0C7I0 530 aa10.67□□□□□ -0.7
SCARB2-209ENST00000638409 ZMYM3Q14202 1370 aa10.67□□□□□ -0.7
SCARB2-209ENST00000638409 KANK1Q14678 1352 aa10.67□□□□□ -0.7
SCARB2-209ENST00000638409 RIC3Q7Z5B4 369 aa10.67□□□□□ -0.7
SCARB2-209ENST00000638409 PRM3Q9NNZ6 103 aa10.67□□□□□ -0.7
SCARB2-209ENST00000638409 ZMIZ1Q9ULJ6 1067 aa10.67□□□□□ -0.7
SCARB2-209ENST00000638409 WASHC2CQ9Y4E1 1318 aa10.67□□□□□ -0.7
SCARB2-209ENST00000638409 ANKRD33BA6NCL7 494 aa10.66□□□□□ -0.7
SCARB2-209ENST00000638409 DPH6Q7L8W6 267 aa10.66□□□□□ -0.7
SCARB2-209ENST00000638409 MAFBQ9Y5Q3 323 aaPredicted RBP10.66□□□□□ -0.7
SCARB2-209ENST00000638409 ARHGAP31Q2M1Z3 1444 aa10.66□□□□□ -0.7
SCARB2-209ENST00000638409 IQGAP3Q86VI3 1631 aa10.66□□□□□ -0.7
SCARB2-209ENST00000638409 CEP152O94986 1710 aa10.66□□□□□ -0.7
SCARB2-209ENST00000638409 CAMSAP1Q5T5Y3 1602 aa10.66□□□□□ -0.7
SCARB2-209ENST00000638409 FOSBP53539 338 aa10.66□□□□□ -0.7
SCARB2-209ENST00000638409 NPAS4Q8IUM7 802 aa10.66□□□□□ -0.7
SCARB2-209ENST00000638409 ZNF710Q8N1W2 664 aa10.66□□□□□ -0.7
SCARB2-209ENST00000638409 ALG2Q9H553 416 aa10.65□□□□□ -0.7
SCARB2-209ENST00000638409 PZPP20742 1482 aa10.65□□□□□ -0.7
SCARB2-209ENST00000638409 NPATQ14207 1427 aa10.65□□□□□ -0.7
SCARB2-209ENST00000638409 SETD5Q9C0A6 1442 aa10.65□□□□□ -0.7
SCARB2-209ENST00000638409 MARSP56192 900 aaKnown RBP10.65□□□□□ -0.7
SCARB2-209ENST00000638409 PRR7Q8TB68 274 aa10.65□□□□□ -0.7
SCARB2-209ENST00000638409 HMX1Q9NP08 348 aaPredicted RBP10.65□□□□□ -0.7
SCARB2-209ENST00000638409 METTL3Q86U44 580 aaKnown RBP10.65□□□□□ -0.71
SCARB2-209ENST00000638409 RTL5Q5HYW3 569 aaPredicted RBP10.64□□□□□ -0.71
SCARB2-209ENST00000638409 SLAIN2Q9P270 581 aa10.64□□□□□ -0.71
SCARB2-209ENST00000638409 TET3O43151 1660 aa10.64□□□□□ -0.71
SCARB2-209ENST00000638409 ERCC3P19447 782 aa10.64□□□□□ -0.71
SCARB2-209ENST00000638409 C9orf131Q5VYM1 1079 aa10.64□□□□□ -0.71
SCARB2-209ENST00000638409 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.64□□□□□ -0.71
SCARB2-209ENST00000638409 EFCAB6Q5THR3 1501 aa10.63□□□□□ -0.71
SCARB2-209ENST00000638409 TAF7LQ5H9L4 462 aa10.63□□□□□ -0.71
SCARB2-209ENST00000638409 TBC1D9Q6ZT07 1266 aa10.63□□□□□ -0.71
SCARB2-209ENST00000638409 DNAJC2Q99543 621 aaKnown RBP10.63□□□□□ -0.71
SCARB2-209ENST00000638409 RPRD2Q5VT52 1461 aaKnown RBP10.62□□□□□ -0.71
SCARB2-209ENST00000638409 TSNAXIP1Q2TAA8 658 aa10.62□□□□□ -0.71
SCARB2-209ENST00000638409 CC2D2BQ6DHV5 1058 aa10.62□□□□□ -0.71
SCARB2-209ENST00000638409 MICAL1Q8TDZ2 1067 aa10.62□□□□□ -0.71
SCARB2-209ENST00000638409 PRDM16Q9HAZ2 1276 aa10.62□□□□□ -0.71
SCARB2-209ENST00000638409 NUP155O75694 1391 aa10.62□□□□□ -0.71
SCARB2-209ENST00000638409 SPATA31D1Q6ZQQ2 1576 aa10.62□□□□□ -0.71
SCARB2-209ENST00000638409 SOWAHDA6NJG2 315 aa10.61□□□□□ -0.71
SCARB2-209ENST00000638409 C7P10643 843 aa10.61□□□□□ -0.71
SCARB2-209ENST00000638409 PTGER2P43116 358 aa10.61□□□□□ -0.71
SCARB2-209ENST00000638409 CEBPAP49715 358 aaPredicted RBP10.61□□□□□ -0.71
SCARB2-209ENST00000638409 PCDHB15Q9Y5E8 787 aa10.61□□□□□ -0.71
SCARB2-209ENST00000638409 NDUFB9Q9Y6M9 179 aa10.61□□□□□ -0.71
SCARB2-209ENST00000638409 SETD1BQ9UPS6 1966 aaKnown RBP10.61□□□□□ -0.71
SCARB2-209ENST00000638409 RAB11FIP3O75154 756 aa10.61□□□□□ -0.71
SCARB2-209ENST00000638409 KIF12Q96FN5 646 aa10.61□□□□□ -0.71
SCARB2-209ENST00000638409 SPIRE2Q8WWL2 714 aa10.6□□□□□ -0.71
SCARB2-209ENST00000638409 PREX1Q8TCU6 1659 aa10.6□□□□□ -0.71
SCARB2-209ENST00000638409 RAB3GAP2Q9H2M9 1393 aa10.6□□□□□ -0.71
SCARB2-209ENST00000638409 GOLGA2Q08379 1002 aa10.6□□□□□ -0.71
SCARB2-209ENST00000638409 TMC2Q8TDI7 906 aa10.6□□□□□ -0.71
SCARB2-209ENST00000638409 BIN2Q9UBW5 565 aaPredicted RBP10.6□□□□□ -0.71
SCARB2-209ENST00000638409 E9PCH4 1651 aa10.59□□□□□ -0.71
SCARB2-209ENST00000638409 ERVK-7P63135 1459 aa10.59□□□□□ -0.71
SCARB2-209ENST00000638409 SF3A1Q15459 793 aaKnown RBP10.59□□□□□ -0.71
SCARB2-209ENST00000638409 B4GALNT3Q6L9W6 998 aa10.59□□□□□ -0.71
SCARB2-209ENST00000638409 NOS1P29475 1434 aa10.58□□□□□ -0.72
SCARB2-209ENST00000638409 WASHC4Q2M389 1173 aa10.58□□□□□ -0.72
SCARB2-209ENST00000638409 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.58□□□□□ -0.72
SCARB2-209ENST00000638409 ZNF142P52746 1687 aaPredicted RBP10.57□□□□□ -0.72
SCARB2-209ENST00000638409 DPY19L2Q6NUT2 758 aa10.57□□□□□ -0.72
SCARB2-209ENST00000638409 REM2Q8IYK8 340 aaPredicted RBP10.57□□□□□ -0.72
SCARB2-209ENST00000638409 GPATCH3Q96I76 525 aa10.57□□□□□ -0.72
SCARB2-209ENST00000638409 TRIM34Q9BYJ4 488 aa10.57□□□□□ -0.72
SCARB2-209ENST00000638409 MYO3AQ8NEV4 1616 aa10.57□□□□□ -0.72
SCARB2-209ENST00000638409 CABLES1Q8TDN4 633 aa10.57□□□□□ -0.72
SCARB2-209ENST00000638409 TNRQ92752 1358 aa10.57□□□□□ -0.72
SCARB2-209ENST00000638409 NLRP1Q9C000 1473 aa10.56□□□□□ -0.72
SCARB2-209ENST00000638409 LOC102724159A0A0B4J2E5 919 aa10.56□□□□□ -0.72
SCARB2-209ENST00000638409 C2orf72A6NCS6 295 aa10.56□□□□□ -0.72
SCARB2-209ENST00000638409 MOXD2PA6NHM9 499 aa10.56□□□□□ -0.72
SCARB2-209ENST00000638409 SOCS7O14512 581 aa10.56□□□□□ -0.72
SCARB2-209ENST00000638409 ERCC5P28715 1186 aaPredicted RBP10.56□□□□□ -0.72
SCARB2-209ENST00000638409 PWP2Q15269 919 aaKnown RBP10.56□□□□□ -0.72
SCARB2-209ENST00000638409 LMTK3Q96Q04 1460 aa10.56□□□□□ -0.72
SCARB2-209ENST00000638409 NDUFV2P19404 249 aa10.56□□□□□ -0.72
SCARB2-209ENST00000638409 SSFA2P28290 1259 aa10.56□□□□□ -0.72
SCARB2-209ENST00000638409 TICAM2Q86XR7 235 aa10.56□□□□□ -0.72
SCARB2-209ENST00000638409 PTPRTO14522 1441 aa10.56□□□□□ -0.72
SCARB2-209ENST00000638409 ZEB1P37275 1124 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms