RNA–Protein interactions for RNA: ENST00000638334.1

NECAP1-211, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-211ENST00000638334 USP19O94966 1318 aa12.99□□□□□ -0.33
NECAP1-211ENST00000638334 TTC21BQ7Z4L5 1316 aa12.99□□□□□ -0.33
NECAP1-211ENST00000638334 GCC1Q96CN9 775 aa12.99□□□□□ -0.33
NECAP1-211ENST00000638334 API5Q9BZZ5 524 aaKnown RBP12.99□□□□□ -0.33
NECAP1-211ENST00000638334 SLIT1O75093 1534 aa12.98□□□□□ -0.33
NECAP1-211ENST00000638334 TTC21AQ8NDW8 1320 aa12.98□□□□□ -0.33
NECAP1-211ENST00000638334 TSR2Q969E8 191 aaKnown RBP12.98□□□□□ -0.33
NECAP1-211ENST00000638334 ADAMTS13Q76LX8 1427 aa12.97□□□□□ -0.33
NECAP1-211ENST00000638334 USP31Q70CQ4 1352 aa12.97□□□□□ -0.33
NECAP1-211ENST00000638334 PLPPR3Q6T4P5 718 aa12.97□□□□□ -0.33
NECAP1-211ENST00000638334 WAPLQ7Z5K2 1190 aa12.97□□□□□ -0.33
NECAP1-211ENST00000638334 ITPRIPQ8IWB1 547 aa12.97□□□□□ -0.33
NECAP1-211ENST00000638334 NOB1Q9ULX3 412 aaKnown RBP12.97□□□□□ -0.33
NECAP1-211ENST00000638334 ARHGAP23Q9P227 1491 aa12.97□□□□□ -0.33
NECAP1-211ENST00000638334 OVOS2A0A0J9YW53 1432 aa12.96□□□□□ -0.33
NECAP1-211ENST00000638334 OVOS2Q6IE36 1432 aa12.96□□□□□ -0.33
NECAP1-211ENST00000638334 NALCNQ8IZF0 1738 aa12.96□□□□□ -0.33
NECAP1-211ENST00000638334 KIAA0232Q92628 1395 aa12.96□□□□□ -0.33
NECAP1-211ENST00000638334 RIMS1Q86UR5 1692 aaKnown RBP12.96□□□□□ -0.34
NECAP1-211ENST00000638334 ABCC4O15439 1325 aa12.95□□□□□ -0.34
NECAP1-211ENST00000638334 SOS1Q07889 1333 aaPredicted RBP12.95□□□□□ -0.34
NECAP1-211ENST00000638334 VAMP4O75379 141 aa12.95□□□□□ -0.34
NECAP1-211ENST00000638334 NUCB1Q02818 461 aa12.95□□□□□ -0.34
NECAP1-211ENST00000638334 NFKBIBQ15653 356 aa12.95□□□□□ -0.34
NECAP1-211ENST00000638334 BCL2L13Q9BXK5 485 aa12.95□□□□□ -0.34
NECAP1-211ENST00000638334 TBX22Q9Y458 520 aa12.95□□□□□ -0.34
NECAP1-211ENST00000638334 SKAP1Q86WV1 359 aa12.94□□□□□ -0.34
NECAP1-211ENST00000638334 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.94□□□□□ -0.34
NECAP1-211ENST00000638334 TMEM57Q8N5G2 664 aa12.94□□□□□ -0.34
NECAP1-211ENST00000638334 MRPL50Q8N5N7 158 aaKnown RBP12.94□□□□□ -0.34
NECAP1-211ENST00000638334 EID1Q9Y6B2 187 aa12.94□□□□□ -0.34
NECAP1-211ENST00000638334 USP6P35125 1406 aa12.94□□□□□ -0.34
NECAP1-211ENST00000638334 LAS1LQ9Y4W2 734 aaKnown RBP12.93□□□□□ -0.34
NECAP1-211ENST00000638334 SSH2Q76I76 1423 aa12.93□□□□□ -0.34
NECAP1-211ENST00000638334 ANKARQ7Z5J8 1434 aa12.93□□□□□ -0.34
NECAP1-211ENST00000638334 ARHGEF10O15013 1369 aa12.93□□□□□ -0.34
NECAP1-211ENST00000638334 GSE1Q14687 1217 aa12.92□□□□□ -0.34
NECAP1-211ENST00000638334 BMP2KLQ5H9B9 411 aa12.92□□□□□ -0.34
NECAP1-211ENST00000638334 TXNDC2Q86VQ3 553 aa12.92□□□□□ -0.34
NECAP1-211ENST00000638334 PTPRUQ92729 1446 aa12.92□□□□□ -0.34
NECAP1-211ENST00000638334 PTPRCP08575 1304 aa12.91□□□□□ -0.34
NECAP1-211ENST00000638334 RGPD1P0DJD0 1748 aa12.91□□□□□ -0.34
NECAP1-211ENST00000638334 ZBTB7BO15156 539 aaPredicted RBP12.91□□□□□ -0.34
NECAP1-211ENST00000638334 HTATSF1O43719 755 aaKnown RBP12.91□□□□□ -0.34
NECAP1-211ENST00000638334 NME9Q86XW9 330 aa12.91□□□□□ -0.34
NECAP1-211ENST00000638334 USP54Q70EL1 1684 aa12.91□□□□□ -0.34
NECAP1-211ENST00000638334 ROBO2Q9HCK4 1378 aa12.91□□□□□ -0.34
NECAP1-211ENST00000638334 TWISTNBQ3B726 338 aaPredicted RBP12.9□□□□□ -0.34
NECAP1-211ENST00000638334 CHD1LQ86WJ1 897 aa12.9□□□□□ -0.34
NECAP1-211ENST00000638334 IL27Q8NEV9 243 aa12.9□□□□□ -0.34
NECAP1-211ENST00000638334 BABAM1Q9NWV8 329 aa12.9□□□□□ -0.34
NECAP1-211ENST00000638334 EMILIN1Q9Y6C2 1016 aa12.9□□□□□ -0.34
NECAP1-211ENST00000638334 RBM25P49756 843 aaKnown RBP12.89□□□□□ -0.35
NECAP1-211ENST00000638334 INTS3Q68E01 1043 aaKnown RBP12.89□□□□□ -0.35
NECAP1-211ENST00000638334 SNX21Q969T3 373 aa12.89□□□□□ -0.35
NECAP1-211ENST00000638334 PHACTR3Q96KR7 559 aa12.89□□□□□ -0.35
NECAP1-211ENST00000638334 CHMP4AQ9BY43 222 aa12.89□□□□□ -0.35
NECAP1-211ENST00000638334 MBIPQ9NS73 344 aa12.89□□□□□ -0.35
NECAP1-211ENST00000638334 TNNQ9UQP3 1299 aa12.89□□□□□ -0.35
NECAP1-211ENST00000638334 PRR36Q9H6K5 1346 aa12.88□□□□□ -0.35
NECAP1-211ENST00000638334 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.88□□□□□ -0.35
NECAP1-211ENST00000638334 DLG5Q8TDM6 1919 aa12.88□□□□□ -0.35
NECAP1-211ENST00000638334 CHL1O00533 1208 aa12.88□□□□□ -0.35
NECAP1-211ENST00000638334 C22orf23Q9BZE7 217 aa12.88□□□□□ -0.35
NECAP1-211ENST00000638334 SBNO1A3KN83 1393 aa12.88□□□□□ -0.35
NECAP1-211ENST00000638334 KDRP35968 1356 aa12.88□□□□□ -0.35
NECAP1-211ENST00000638334 RTL1A6NKG5 1358 aa12.87□□□□□ -0.35
NECAP1-211ENST00000638334 FLT4P35916 1363 aa12.87□□□□□ -0.35
NECAP1-211ENST00000638334 PTMSP20962 102 aa12.87□□□□□ -0.35
NECAP1-211ENST00000638334 MLECQ14165 292 aa12.87□□□□□ -0.35
NECAP1-211ENST00000638334 RPAP2Q8IXW5 612 aaPredicted RBP12.87□□□□□ -0.35
NECAP1-211ENST00000638334 THEMISQ8N1K5 641 aaPredicted RBP12.87□□□□□ -0.35
NECAP1-211ENST00000638334 ANTXR1Q9H6X2 564 aa12.87□□□□□ -0.35
NECAP1-211ENST00000638334 CIZ1Q9ULV3 898 aaPredicted RBP12.87□□□□□ -0.35
NECAP1-211ENST00000638334 ACEP12821 1306 aa12.87□□□□□ -0.35
NECAP1-211ENST00000638334 HMOX1P09601 288 aa12.86□□□□□ -0.35
NECAP1-211ENST00000638334 XRN1Q8IZH2 1706 aaKnown RBP12.85□□□□□ -0.35
NECAP1-211ENST00000638334 SEC24BO95487 1268 aa12.85□□□□□ -0.35
NECAP1-211ENST00000638334 EIF4A2Q14240 407 aaKnown RBP12.85□□□□□ -0.35
NECAP1-211ENST00000638334 GAS2L2Q8NHY3 880 aa12.85□□□□□ -0.35
NECAP1-211ENST00000638334 TBC1D2Q9BYX2 928 aa12.84□□□□□ -0.35
NECAP1-211ENST00000638334 CHMP5Q9NZZ3 219 aa12.84□□□□□ -0.35
NECAP1-211ENST00000638334 ISY1Q9ULR0 285 aaKnown RBP12.84□□□□□ -0.35
NECAP1-211ENST00000638334 FMN2Q9NZ56 1722 aa12.83□□□□□ -0.36
NECAP1-211ENST00000638334 NCOA3Q9Y6Q9 1424 aa12.83□□□□□ -0.36
NECAP1-211ENST00000638334 HSCBQ8IWL3 235 aa12.83□□□□□ -0.36
NECAP1-211ENST00000638334 CRB1P82279 1406 aa12.82□□□□□ -0.36
NECAP1-211ENST00000638334 DCTPP1Q9H773 170 aa12.82□□□□□ -0.36
NECAP1-211ENST00000638334 HMMRO75330 724 aa12.81□□□□□ -0.36
NECAP1-211ENST00000638334 LTKP29376 864 aa12.81□□□□□ -0.36
NECAP1-211ENST00000638334 SLC4A3P48751 1232 aa12.81□□□□□ -0.36
NECAP1-211ENST00000638334 RRS1Q15050 365 aaKnown RBP12.81□□□□□ -0.36
NECAP1-211ENST00000638334 SULT6B1Q6IMI4 303 aa12.81□□□□□ -0.36
NECAP1-211ENST00000638334 ANKRD44Q8N8A2 993 aa12.81□□□□□ -0.36
NECAP1-211ENST00000638334 C8orf58Q8NAV2 365 aa12.81□□□□□ -0.36
NECAP1-211ENST00000638334 IGSF1Q8N6C5 1336 aa12.81□□□□□ -0.36
NECAP1-211ENST00000638334 CACNA1FO60840 1977 aa12.8□□□□□ -0.36
NECAP1-211ENST00000638334 CCT4P50991 539 aaKnown RBP12.8□□□□□ -0.36
NECAP1-211ENST00000638334 L1TD1Q5T7N2 865 aaKnown RBP12.8□□□□□ -0.36
NECAP1-211ENST00000638334 TSPYL6Q8N831 410 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms