RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 BACH2Q9BYV9 841 aa12.3□□□□□ -0.44
CACNA1A-248ENST00000637774 CD163L1Q9NR16 1453 aa12.29□□□□□ -0.44
CACNA1A-248ENST00000637774 MBIPQ9NS73 344 aa12.29□□□□□ -0.44
CACNA1A-248ENST00000637774 ADAMTS13Q76LX8 1427 aa12.29□□□□□ -0.44
CACNA1A-248ENST00000637774 MVPQ14764 893 aaKnown RBP12.29□□□□□ -0.44
CACNA1A-248ENST00000637774 IPO9Q96P70 1041 aaKnown RBP12.29□□□□□ -0.44
CACNA1A-248ENST00000637774 MYO3AQ8NEV4 1616 aa12.29□□□□□ -0.44
CACNA1A-248ENST00000637774 KIF13AQ9H1H9 1805 aa12.28□□□□□ -0.44
CACNA1A-248ENST00000637774 PLEKHG3A1L390 1219 aa12.28□□□□□ -0.44
CACNA1A-248ENST00000637774 HSPA2P54652 639 aa12.28□□□□□ -0.44
CACNA1A-248ENST00000637774 SIRT1Q96EB6 747 aa12.28□□□□□ -0.44
CACNA1A-248ENST00000637774 C8orf58Q8NAV2 365 aa12.27□□□□□ -0.44
CACNA1A-248ENST00000637774 TSPYL4Q9UJ04 414 aa12.27□□□□□ -0.44
CACNA1A-248ENST00000637774 ORAI2Q96SN7 254 aa12.27□□□□□ -0.45
CACNA1A-248ENST00000637774 ANO8Q9HCE9 1232 aaPredicted RBP12.27□□□□□ -0.45
CACNA1A-248ENST00000637774 DDX19BQ9UMR2 479 aa12.27□□□□□ -0.45
CACNA1A-248ENST00000637774 FAM161AQ3B820 660 aa12.27□□□□□ -0.45
CACNA1A-248ENST00000637774 PDZRN3Q9UPQ7 1066 aa12.27□□□□□ -0.45
CACNA1A-248ENST00000637774 RTL5Q5HYW3 569 aaPredicted RBP12.26□□□□□ -0.45
CACNA1A-248ENST00000637774 KIF16BQ96L93 1317 aa12.26□□□□□ -0.45
CACNA1A-248ENST00000637774 PHF23Q9BUL5 403 aaPredicted RBP12.26□□□□□ -0.45
CACNA1A-248ENST00000637774 FAM135BQ49AJ0 1406 aa12.26□□□□□ -0.45
CACNA1A-248ENST00000637774 PTPRUQ92729 1446 aa12.26□□□□□ -0.45
CACNA1A-248ENST00000637774 NLRP1Q9C000 1473 aa12.25□□□□□ -0.45
CACNA1A-248ENST00000637774 ZC3H6P61129 1189 aaKnown RBP12.25□□□□□ -0.45
CACNA1A-248ENST00000637774 ATP7BP35670 1465 aa12.25□□□□□ -0.45
CACNA1A-248ENST00000637774 EYA1Q99502 592 aa12.25□□□□□ -0.45
CACNA1A-248ENST00000637774 LNPKQ9C0E8 428 aa12.25□□□□□ -0.45
CACNA1A-248ENST00000637774 UPF2Q9HAU5 1272 aaKnown RBP12.24□□□□□ -0.45
CACNA1A-248ENST00000637774 CPS1P31327 1500 aa12.24□□□□□ -0.45
CACNA1A-248ENST00000637774 HAP1P54257 671 aaPredicted RBP12.24□□□□□ -0.45
CACNA1A-248ENST00000637774 CFAP44Q96MT7 982 aa12.24□□□□□ -0.45
CACNA1A-248ENST00000637774 KDM2BQ8NHM5 1336 aa12.24□□□□□ -0.45
CACNA1A-248ENST00000637774 CPSF1Q10570 1443 aaKnown RBP12.23□□□□□ -0.45
CACNA1A-248ENST00000637774 VAMP4O75379 141 aa12.23□□□□□ -0.45
CACNA1A-248ENST00000637774 EIF2S2P20042 333 aaKnown RBP12.23□□□□□ -0.45
CACNA1A-248ENST00000637774 MTHFSDQ2M296 383 aaKnown RBP12.23□□□□□ -0.45
CACNA1A-248ENST00000637774 DDX17Q92841 729 aaKnown RBP12.23□□□□□ -0.45
CACNA1A-248ENST00000637774 CSB-PGBD3P0DP91 1061 aa12.23□□□□□ -0.45
CACNA1A-248ENST00000637774 ANKRD45Q5TZF3 282 aa12.23□□□□□ -0.45
CACNA1A-248ENST00000637774 IFT57Q9NWB7 429 aa12.23□□□□□ -0.45
CACNA1A-248ENST00000637774 REREQ9P2R6 1566 aa12.23□□□□□ -0.45
CACNA1A-248ENST00000637774 CT47B1P0C2W7 299 aaPredicted RBP12.22□□□□□ -0.45
CACNA1A-248ENST00000637774 SLC4A2P04920 1241 aa12.22□□□□□ -0.45
CACNA1A-248ENST00000637774 ATF3P18847 181 aa12.22□□□□□ -0.45
CACNA1A-248ENST00000637774 ZNF428Q96B54 188 aa12.22□□□□□ -0.45
CACNA1A-248ENST00000637774 IL16Q14005 1332 aa12.21□□□□□ -0.45
CACNA1A-248ENST00000637774 USP6P35125 1406 aa12.21□□□□□ -0.45
CACNA1A-248ENST00000637774 PNPLA6Q8IY17 1366 aa12.21□□□□□ -0.45
CACNA1A-248ENST00000637774 LRRC59Q96AG4 307 aaKnown RBP12.21□□□□□ -0.45
CACNA1A-248ENST00000637774 TTC21AQ8NDW8 1320 aa12.21□□□□□ -0.46
CACNA1A-248ENST00000637774 SPRYD3Q8NCJ5 442 aa12.21□□□□□ -0.46
CACNA1A-248ENST00000637774 STK31Q9BXU1 1019 aa12.21□□□□□ -0.46
CACNA1A-248ENST00000637774 MFAP1P55081 439 aaKnown RBP12.2□□□□□ -0.46
CACNA1A-248ENST00000637774 F6X3S4 739 aa12.19□□□□□ -0.46
CACNA1A-248ENST00000637774 DLC1Q96QB1 1528 aa12.19□□□□□ -0.46
CACNA1A-248ENST00000637774 GAS2L2Q8NHY3 880 aa12.19□□□□□ -0.46
CACNA1A-248ENST00000637774 HOXC9P31274 260 aa12.19□□□□□ -0.46
CACNA1A-248ENST00000637774 FKBP5Q13451 457 aaPredicted RBP12.18□□□□□ -0.46
CACNA1A-248ENST00000637774 CABLES1Q8TDN4 633 aa12.18□□□□□ -0.46
CACNA1A-248ENST00000637774 API5Q9BZZ5 524 aaKnown RBP12.18□□□□□ -0.46
CACNA1A-248ENST00000637774 ALDH1L2Q3SY69 923 aa12.18□□□□□ -0.46
CACNA1A-248ENST00000637774 DDRGK1Q96HY6 314 aa12.18□□□□□ -0.46
CACNA1A-248ENST00000637774 NLRP2Q9NX02 1062 aa12.18□□□□□ -0.46
CACNA1A-248ENST00000637774 FLT4P35916 1363 aa12.18□□□□□ -0.46
CACNA1A-248ENST00000637774 AATKQ6ZMQ8 1374 aa12.18□□□□□ -0.46
CACNA1A-248ENST00000637774 TEFQ10587 303 aa12.18□□□□□ -0.46
CACNA1A-248ENST00000637774 MRPL50Q8N5N7 158 aaKnown RBP12.18□□□□□ -0.46
CACNA1A-248ENST00000637774 KRT28Q7Z3Y7 464 aa12.17□□□□□ -0.46
CACNA1A-248ENST00000637774 GNAT3A8MTJ3 354 aa12.16□□□□□ -0.46
CACNA1A-248ENST00000637774 IQSEC2Q5JU85 1478 aa12.16□□□□□ -0.46
CACNA1A-248ENST00000637774 TECPR2O15040 1411 aa12.16□□□□□ -0.46
CACNA1A-248ENST00000637774 C8orf34Q49A92 452 aa12.16□□□□□ -0.46
CACNA1A-248ENST00000637774 MPRIPQ6WCQ1 1025 aa12.16□□□□□ -0.46
CACNA1A-248ENST00000637774 ZNF530Q6P9A1 599 aaPredicted RBP12.16□□□□□ -0.46
CACNA1A-248ENST00000637774 MED14O60244 1454 aa12.15□□□□□ -0.46
CACNA1A-248ENST00000637774 LRRC7Q96NW7 1537 aa12.15□□□□□ -0.46
CACNA1A-248ENST00000637774 SEC24BO95487 1268 aa12.15□□□□□ -0.46
CACNA1A-248ENST00000637774 SLKQ9H2G2 1235 aaPredicted RBP12.15□□□□□ -0.46
CACNA1A-248ENST00000637774 CHMP4BQ9H444 224 aaKnown RBP12.15□□□□□ -0.46
CACNA1A-248ENST00000637774 SETD1BQ9UPS6 1966 aaKnown RBP12.15□□□□□ -0.46
CACNA1A-248ENST00000637774 A0A0G2JS52 829 aa12.15□□□□□ -0.46
CACNA1A-248ENST00000637774 GCP02774 474 aa12.15□□□□□ -0.46
CACNA1A-248ENST00000637774 CHRNA2Q15822 529 aa12.15□□□□□ -0.46
CACNA1A-248ENST00000637774 C1orf141Q5JVX7 400 aa12.15□□□□□ -0.47
CACNA1A-248ENST00000637774 COL3A1P02461 1466 aaPredicted RBP12.14□□□□□ -0.47
CACNA1A-248ENST00000637774 NBPF6Q5VWK0 638 aa12.14□□□□□ -0.47
CACNA1A-248ENST00000637774 NBPF4Q96M43 638 aa12.14□□□□□ -0.47
CACNA1A-248ENST00000637774 ZBTB40Q9NUA8 1239 aa12.14□□□□□ -0.47
CACNA1A-248ENST00000637774 SHPRHQ149N8 1683 aa12.14□□□□□ -0.47
CACNA1A-248ENST00000637774 SBNO1A3KN83 1393 aa12.13□□□□□ -0.47
CACNA1A-248ENST00000637774 ANXA1P04083 346 aa12.13□□□□□ -0.47
CACNA1A-248ENST00000637774 DNAJC5Q9H3Z4 198 aa12.13□□□□□ -0.47
CACNA1A-248ENST00000637774 G2E3Q7L622 706 aa12.13□□□□□ -0.47
CACNA1A-248ENST00000637774 MAP2P11137 1827 aaKnown RBP12.13□□□□□ -0.47
CACNA1A-248ENST00000637774 NRXN3Q9Y4C0 1643 aa12.13□□□□□ -0.47
CACNA1A-248ENST00000637774 UBR1Q8IWV7 1749 aa12.13□□□□□ -0.47
CACNA1A-248ENST00000637774 CDK12Q9NYV4 1490 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-248ENST00000637774 CHL1O00533 1208 aa12.12□□□□□ -0.47
CACNA1A-248ENST00000637774 AAMPQ13685 434 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms