RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 OVOS2A0A0J9YW53 1432 aa19.76■□□□□ 0.75
SCN8A-214ENST00000637709 OVOS2Q6IE36 1432 aa19.76■□□□□ 0.75
SCN8A-214ENST00000637709 SETD1BQ9UPS6 1966 aaKnown RBP19.75■□□□□ 0.75
SCN8A-214ENST00000637709 XRN1Q8IZH2 1706 aaKnown RBP19.75■□□□□ 0.75
SCN8A-214ENST00000637709 PDE3AQ14432 1141 aa19.75■□□□□ 0.75
SCN8A-214ENST00000637709 CENPQQ7L2Z9 268 aaPredicted RBP19.75■□□□□ 0.75
SCN8A-214ENST00000637709 TSPYL6Q8N831 410 aa19.75■□□□□ 0.75
SCN8A-214ENST00000637709 NLRP6P59044 892 aa19.75■□□□□ 0.75
SCN8A-214ENST00000637709 MAP3K19Q56UN5 1328 aa19.74■□□□□ 0.75
SCN8A-214ENST00000637709 XPCQ01831 940 aaPredicted RBP19.74■□□□□ 0.75
SCN8A-214ENST00000637709 PNNQ9H307 717 aaKnown RBP19.74■□□□□ 0.75
SCN8A-214ENST00000637709 FTSJ3Q8IY81 847 aaKnown RBP19.74■□□□□ 0.75
SCN8A-214ENST00000637709 NOB1Q9ULX3 412 aaKnown RBP19.74■□□□□ 0.75
SCN8A-214ENST00000637709 PCDHB15Q9Y5E8 787 aa19.74■□□□□ 0.75
SCN8A-214ENST00000637709 ZBTB7CA1YPR0 619 aa19.72■□□□□ 0.75
SCN8A-214ENST00000637709 TRIM27P14373 513 aa19.72■□□□□ 0.75
SCN8A-214ENST00000637709 LTV1Q96GA3 475 aaPredicted RBP19.72■□□□□ 0.75
SCN8A-214ENST00000637709 MCM10Q7L590 875 aa19.71■□□□□ 0.75
SCN8A-214ENST00000637709 FOXO3O43524 673 aa19.71■□□□□ 0.75
SCN8A-214ENST00000637709 SSH2Q76I76 1423 aa19.7■□□□□ 0.74
SCN8A-214ENST00000637709 NALCNQ8IZF0 1738 aa19.7■□□□□ 0.74
SCN8A-214ENST00000637709 ABTB2Q8N961 1025 aa19.7■□□□□ 0.74
SCN8A-214ENST00000637709 MBIPQ9NS73 344 aa19.7■□□□□ 0.74
SCN8A-214ENST00000637709 PIK3C2AO00443 1686 aa19.7■□□□□ 0.74
SCN8A-214ENST00000637709 KRT24Q2M2I5 525 aa19.7■□□□□ 0.74
SCN8A-214ENST00000637709 ZKSCAN2Q63HK3 967 aa19.7■□□□□ 0.74
SCN8A-214ENST00000637709 ITPRIPQ8IWB1 547 aa19.69■□□□□ 0.74
SCN8A-214ENST00000637709 ADAMTSL3P82987 1691 aa19.69■□□□□ 0.74
SCN8A-214ENST00000637709 AMPHP49418 695 aa19.69■□□□□ 0.74
SCN8A-214ENST00000637709 ESCO1Q5FWF5 840 aa19.69■□□□□ 0.74
SCN8A-214ENST00000637709 BACH2Q9BYV9 841 aa19.69■□□□□ 0.74
SCN8A-214ENST00000637709 DZIP1LQ8IYY4 767 aaKnown RBP19.68■□□□□ 0.74
SCN8A-214ENST00000637709 MIS18AQ9NYP9 233 aa19.68■□□□□ 0.74
SCN8A-214ENST00000637709 CHD2O14647 1828 aaKnown RBP19.68■□□□□ 0.74
SCN8A-214ENST00000637709 C8orf58Q8NAV2 365 aa19.66■□□□□ 0.74
SCN8A-214ENST00000637709 IL16Q14005 1332 aa19.66■□□□□ 0.74
SCN8A-214ENST00000637709 MVPQ14764 893 aaKnown RBP19.66■□□□□ 0.74
SCN8A-214ENST00000637709 TMEM57Q8N5G2 664 aa19.65■□□□□ 0.74
SCN8A-214ENST00000637709 FMN2Q9NZ56 1722 aa19.65■□□□□ 0.74
SCN8A-214ENST00000637709 USHBP1Q8N6Y0 703 aa19.65■□□□□ 0.74
SCN8A-214ENST00000637709 ORAI2Q96SN7 254 aa19.65■□□□□ 0.74
SCN8A-214ENST00000637709 DNAJC5Q9H3Z4 198 aa19.65■□□□□ 0.74
SCN8A-214ENST00000637709 NCBP3Q53F19 620 aaKnown RBP19.64■□□□□ 0.74
SCN8A-214ENST00000637709 LMOD2Q6P5Q4 547 aa19.64■□□□□ 0.74
SCN8A-214ENST00000637709 ATF7IPQ6VMQ6 1270 aa19.64■□□□□ 0.74
SCN8A-214ENST00000637709 PHF8Q9UPP1 1060 aa19.64■□□□□ 0.74
SCN8A-214ENST00000637709 USP31Q70CQ4 1352 aa19.64■□□□□ 0.73
SCN8A-214ENST00000637709 ANP32AP39687 249 aaKnown RBP19.64■□□□□ 0.73
SCN8A-214ENST00000637709 TTC21AQ8NDW8 1320 aa19.63■□□□□ 0.73
SCN8A-214ENST00000637709 ERICH6Q7L0X2 663 aa19.63■□□□□ 0.73
SCN8A-214ENST00000637709 EYA1Q99502 592 aa19.63■□□□□ 0.73
SCN8A-214ENST00000637709 ANP32EQ9BTT0 268 aa19.63■□□□□ 0.73
SCN8A-214ENST00000637709 ZNF142P52746 1687 aaPredicted RBP19.62■□□□□ 0.73
SCN8A-214ENST00000637709 VAMP4O75379 141 aa19.62■□□□□ 0.73
SCN8A-214ENST00000637709 MS4A1P11836 297 aa19.61■□□□□ 0.73
SCN8A-214ENST00000637709 GNAI1P63096 354 aa19.61■□□□□ 0.73
SCN8A-214ENST00000637709 MTHFSDQ2M296 383 aaKnown RBP19.61■□□□□ 0.73
SCN8A-214ENST00000637709 TWISTNBQ3B726 338 aaPredicted RBP19.61■□□□□ 0.73
SCN8A-214ENST00000637709 PSME1Q06323 249 aa19.6■□□□□ 0.73
SCN8A-214ENST00000637709 IFT57Q9NWB7 429 aa19.6■□□□□ 0.73
SCN8A-214ENST00000637709 MARF1Q9Y4F3 1742 aaKnown RBP19.6■□□□□ 0.73
SCN8A-214ENST00000637709 C1orf115Q9H7X2 142 aa19.6■□□□□ 0.73
SCN8A-214ENST00000637709 NPHP4O75161 1426 aaPredicted RBP19.59■□□□□ 0.73
SCN8A-214ENST00000637709 CFAP44Q96MT7 982 aa19.59■□□□□ 0.73
SCN8A-214ENST00000637709 BCL11AQ9H165 835 aa19.59■□□□□ 0.73
SCN8A-214ENST00000637709 FLT4P35916 1363 aa19.59■□□□□ 0.73
SCN8A-214ENST00000637709 ZNF853P0CG23 659 aa19.59■□□□□ 0.73
SCN8A-214ENST00000637709 CT47B1P0C2W7 299 aaPredicted RBP19.58■□□□□ 0.73
SCN8A-214ENST00000637709 C8orf34Q49A92 452 aa19.58■□□□□ 0.73
SCN8A-214ENST00000637709 SBNO1A3KN83 1393 aa19.58■□□□□ 0.73
SCN8A-214ENST00000637709 PIK3R4Q99570 1358 aa19.58■□□□□ 0.73
SCN8A-214ENST00000637709 HOXC9P31274 260 aa19.58■□□□□ 0.72
SCN8A-214ENST00000637709 HSPA2P54652 639 aa19.58■□□□□ 0.72
SCN8A-214ENST00000637709 DDX17Q92841 729 aaKnown RBP19.58■□□□□ 0.72
SCN8A-214ENST00000637709 RGPD1P0DJD0 1748 aa19.57■□□□□ 0.72
SCN8A-214ENST00000637709 ANKARQ7Z5J8 1434 aa19.56■□□□□ 0.72
SCN8A-214ENST00000637709 MRPL50Q8N5N7 158 aaKnown RBP19.56■□□□□ 0.72
SCN8A-214ENST00000637709 PDZRN3Q9UPQ7 1066 aa19.56■□□□□ 0.72
SCN8A-214ENST00000637709 LMOD3Q0VAK6 560 aa19.55■□□□□ 0.72
SCN8A-214ENST00000637709 PROSER2Q86WR7 435 aaPredicted RBP19.55■□□□□ 0.72
SCN8A-214ENST00000637709 IPO9Q96P70 1041 aaKnown RBP19.55■□□□□ 0.72
SCN8A-214ENST00000637709 KIF16BQ96L93 1317 aa19.55■□□□□ 0.72
SCN8A-214ENST00000637709 CALD1Q05682 793 aaKnown RBP19.54■□□□□ 0.72
SCN8A-214ENST00000637709 NOP58Q9Y2X3 529 aaKnown RBP19.54■□□□□ 0.72
SCN8A-214ENST00000637709 LTN1O94822 1766 aa19.53■□□□□ 0.72
SCN8A-214ENST00000637709 ADGRL3Q9HAR2 1447 aa19.52■□□□□ 0.72
SCN8A-214ENST00000637709 ALDH1L2Q3SY69 923 aa19.52■□□□□ 0.72
SCN8A-214ENST00000637709 DDX19BQ9UMR2 479 aa19.52■□□□□ 0.72
SCN8A-214ENST00000637709 FAM161AQ3B820 660 aa19.52■□□□□ 0.72
SCN8A-214ENST00000637709 NECTIN2Q92692 538 aa19.52■□□□□ 0.72
SCN8A-214ENST00000637709 IPO8O15397 1037 aaKnown RBP19.51■□□□□ 0.71
SCN8A-214ENST00000637709 SLC4A3P48751 1232 aa19.51■□□□□ 0.71
SCN8A-214ENST00000637709 LRRC59Q96AG4 307 aaKnown RBP19.51■□□□□ 0.71
SCN8A-214ENST00000637709 SEC24BO95487 1268 aa19.51■□□□□ 0.71
SCN8A-214ENST00000637709 RWDD1Q9H446 243 aaPredicted RBP19.5■□□□□ 0.71
SCN8A-214ENST00000637709 IGSF1Q8N6C5 1336 aa19.5■□□□□ 0.71
SCN8A-214ENST00000637709 ARHGEF10O15013 1369 aa19.5■□□□□ 0.71
SCN8A-214ENST00000637709 RTF1Q92541 710 aaKnown RBP19.5■□□□□ 0.71
SCN8A-214ENST00000637709 ZBTB40Q9NUA8 1239 aa19.49■□□□□ 0.71
SCN8A-214ENST00000637709 ZBTB47Q9UFB7 747 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms