RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 IQGAP3Q86VI3 1631 aa6.91□□□□□ -1.3
CHD2-227ENST00000637572 SULT6B1Q6IMI4 303 aa6.91□□□□□ -1.3
CHD2-227ENST00000637572 ACEP12821 1306 aa6.91□□□□□ -1.3
CHD2-227ENST00000637572 PLEKHG1Q9ULL1 1385 aa6.91□□□□□ -1.3
CHD2-227ENST00000637572 TCERG1O14776 1098 aaKnown RBP6.91□□□□□ -1.3
CHD2-227ENST00000637572 PCDHB8Q9UN66 801 aa6.91□□□□□ -1.3
CHD2-227ENST00000637572 PCDHB13Q9Y5F0 798 aa6.91□□□□□ -1.3
CHD2-227ENST00000637572 PIK3R4Q99570 1358 aa6.91□□□□□ -1.3
CHD2-227ENST00000637572 PTPRMP28827 1452 aa6.91□□□□□ -1.3
CHD2-227ENST00000637572 ASXL1Q8IXJ9 1541 aa6.91□□□□□ -1.3
CHD2-227ENST00000637572 C11orf95C9JLR9 678 aaPredicted RBP6.91□□□□□ -1.3
CHD2-227ENST00000637572 HSP90B1P14625 803 aaKnown RBP6.91□□□□□ -1.3
CHD2-227ENST00000637572 KRT28Q7Z3Y7 464 aa6.91□□□□□ -1.3
CHD2-227ENST00000637572 ZFYVE9O95405 1425 aa6.91□□□□□ -1.3
CHD2-227ENST00000637572 MCCP23508 829 aa6.9□□□□□ -1.3
CHD2-227ENST00000637572 SPATA31E1Q6ZUB1 1445 aa6.9□□□□□ -1.3
CHD2-227ENST00000637572 UNC13BO14795 1591 aa6.9□□□□□ -1.3
CHD2-227ENST00000637572 LMTK2Q8IWU2 1503 aa6.9□□□□□ -1.3
CHD2-227ENST00000637572 PPIP5K1Q6PFW1 1433 aa6.9□□□□□ -1.3
CHD2-227ENST00000637572 E2F4Q16254 413 aa6.9□□□□□ -1.3
CHD2-227ENST00000637572 CCDC30Q5VVM6 783 aa6.9□□□□□ -1.3
CHD2-227ENST00000637572 COL17A1Q9UMD9 1497 aaPredicted RBP6.9□□□□□ -1.31
CHD2-227ENST00000637572 TOM1L2Q6ZVM7 507 aa6.9□□□□□ -1.31
CHD2-227ENST00000637572 YY1P25490 414 aa6.89□□□□□ -1.31
CHD2-227ENST00000637572 RGS3P49796 1198 aa6.89□□□□□ -1.31
CHD2-227ENST00000637572 NUBP1P53384 320 aa6.89□□□□□ -1.31
CHD2-227ENST00000637572 NFE2L2Q16236 605 aa6.89□□□□□ -1.31
CHD2-227ENST00000637572 B4GALNT3Q6L9W6 998 aa6.89□□□□□ -1.31
CHD2-227ENST00000637572 SLC4A10Q6U841 1118 aa6.89□□□□□ -1.31
CHD2-227ENST00000637572 DZIP1LQ8IYY4 767 aaKnown RBP6.89□□□□□ -1.31
CHD2-227ENST00000637572 AGLP35573 1532 aa6.89□□□□□ -1.31
CHD2-227ENST00000637572 FOXO3O43524 673 aa6.89□□□□□ -1.31
CHD2-227ENST00000637572 CENPQQ7L2Z9 268 aaPredicted RBP6.89□□□□□ -1.31
CHD2-227ENST00000637572 ZNF330Q9Y3S2 320 aaPredicted RBP6.89□□□□□ -1.31
CHD2-227ENST00000637572 CDC42BPBQ9Y5S2 1711 aa6.89□□□□□ -1.31
CHD2-227ENST00000637572 TAF7LQ5H9L4 462 aa6.89□□□□□ -1.31
CHD2-227ENST00000637572 CROCC2H7BZ55 1655 aa6.89□□□□□ -1.31
CHD2-227ENST00000637572 NME9Q86XW9 330 aa6.89□□□□□ -1.31
CHD2-227ENST00000637572 ZNF530Q6P9A1 599 aaPredicted RBP6.88□□□□□ -1.31
CHD2-227ENST00000637572 RNF39Q9H2S5 420 aa6.88□□□□□ -1.31
CHD2-227ENST00000637572 PRDM15P57071 1507 aaPredicted RBP6.88□□□□□ -1.31
CHD2-227ENST00000637572 HSP90AB4PQ58FF6 505 aa6.88□□□□□ -1.31
CHD2-227ENST00000637572 LARP6Q9BRS8 491 aaKnown RBP6.88□□□□□ -1.31
CHD2-227ENST00000637572 AEBP1Q8IUX7 1158 aa6.88□□□□□ -1.31
CHD2-227ENST00000637572 UGGT1Q9NYU2 1555 aa6.88□□□□□ -1.31
CHD2-227ENST00000637572 GTF2E1P29083 439 aaPredicted RBP6.88□□□□□ -1.31
CHD2-227ENST00000637572 PDE3AQ14432 1141 aa6.88□□□□□ -1.31
CHD2-227ENST00000637572 RRS1Q15050 365 aaKnown RBP6.88□□□□□ -1.31
CHD2-227ENST00000637572 ANP32EQ9BTT0 268 aa6.88□□□□□ -1.31
CHD2-227ENST00000637572 PIK3C2GO75747 1445 aa6.87□□□□□ -1.31
CHD2-227ENST00000637572 PSDA5PKW4 1024 aaPredicted RBP6.87□□□□□ -1.31
CHD2-227ENST00000637572 CLUAP1Q96AJ1 413 aa6.87□□□□□ -1.31
CHD2-227ENST00000637572 POLR3AO14802 1390 aaPredicted RBP6.87□□□□□ -1.31
CHD2-227ENST00000637572 ELL2O00472 640 aaPredicted RBP6.87□□□□□ -1.31
CHD2-227ENST00000637572 FKBP5Q13451 457 aaPredicted RBP6.87□□□□□ -1.31
CHD2-227ENST00000637572 RBM26Q5T8P6 1007 aaKnown RBP6.87□□□□□ -1.31
CHD2-227ENST00000637572 PARD3Q8TEW0 1356 aa6.87□□□□□ -1.31
CHD2-227ENST00000637572 GNAT3A8MTJ3 354 aa6.87□□□□□ -1.31
CHD2-227ENST00000637572 FYB1O15117 783 aa6.87□□□□□ -1.31
CHD2-227ENST00000637572 TMPOP42166 694 aaKnown RBP6.87□□□□□ -1.31
CHD2-227ENST00000637572 ZMYND15Q9H091 742 aa6.87□□□□□ -1.31
CHD2-227ENST00000637572 QTRT2Q9H974 415 aaKnown RBP6.87□□□□□ -1.31
CHD2-227ENST00000637572 EDC4Q6P2E9 1401 aaKnown RBP6.87□□□□□ -1.31
CHD2-227ENST00000637572 PDIA4P13667 645 aaKnown RBP6.86□□□□□ -1.31
CHD2-227ENST00000637572 EIF2S2P20042 333 aaKnown RBP6.86□□□□□ -1.31
CHD2-227ENST00000637572 KCNJ4P48050 445 aa6.86□□□□□ -1.31
CHD2-227ENST00000637572 LRRFIP1Q32MZ4 808 aaKnown RBP6.86□□□□□ -1.31
CHD2-227ENST00000637572 WWC1Q8IX03 1113 aa6.86□□□□□ -1.31
CHD2-227ENST00000637572 STRN4Q9NRL3 753 aa6.86□□□□□ -1.31
CHD2-227ENST00000637572 C9orf78Q9NZ63 289 aaPredicted RBP6.86□□□□□ -1.31
CHD2-227ENST00000637572 GNAI3P08754 354 aa6.86□□□□□ -1.31
CHD2-227ENST00000637572 KIAA1211Q6ZU35 1233 aa6.86□□□□□ -1.31
CHD2-227ENST00000637572 IL16Q14005 1332 aa6.86□□□□□ -1.31
CHD2-227ENST00000637572 INO80Q9ULG1 1556 aaPredicted RBP6.86□□□□□ -1.31
CHD2-227ENST00000637572 PLEKHG3A1L390 1219 aa6.86□□□□□ -1.31
CHD2-227ENST00000637572 DSG3P32926 999 aa6.86□□□□□ -1.31
CHD2-227ENST00000637572 CABP4P57796 275 aa6.86□□□□□ -1.31
CHD2-227ENST00000637572 TWISTNBQ3B726 338 aaPredicted RBP6.86□□□□□ -1.31
CHD2-227ENST00000637572 IFT57Q9NWB7 429 aa6.86□□□□□ -1.31
CHD2-227ENST00000637572 FAM135BQ49AJ0 1406 aa6.86□□□□□ -1.31
CHD2-227ENST00000637572 GOLGA6L22H0YM25 854 aa6.86□□□□□ -1.31
CHD2-227ENST00000637572 ZC3H6P61129 1189 aaKnown RBP6.86□□□□□ -1.31
CHD2-227ENST00000637572 GORABQ5T7V8 394 aa6.86□□□□□ -1.31
CHD2-227ENST00000637572 SYTL4Q96C24 671 aaPredicted RBP6.86□□□□□ -1.31
CHD2-227ENST00000637572 USP35Q9P2H5 1018 aa6.86□□□□□ -1.31
CHD2-227ENST00000637572 KDM5CP41229 1560 aa6.85□□□□□ -1.31
CHD2-227ENST00000637572 NPHP4O75161 1426 aaPredicted RBP6.85□□□□□ -1.31
CHD2-227ENST00000637572 KIF1BO60333 1816 aa6.85□□□□□ -1.31
CHD2-227ENST00000637572 FLT4P35916 1363 aa6.85□□□□□ -1.31
CHD2-227ENST00000637572 HTATSF1O43719 755 aaKnown RBP6.85□□□□□ -1.31
CHD2-227ENST00000637572 BAG6P46379 1132 aa6.85□□□□□ -1.31
CHD2-227ENST00000637572 ANP32BQ92688 251 aaKnown RBP6.85□□□□□ -1.31
CHD2-227ENST00000637572 DIP2BQ9P265 1576 aa6.85□□□□□ -1.31
CHD2-227ENST00000637572 LRRC59Q96AG4 307 aaKnown RBP6.84□□□□□ -1.31
CHD2-227ENST00000637572 CHMP3Q9Y3E7 222 aa6.84□□□□□ -1.31
CHD2-227ENST00000637572 INSRP06213 1382 aa6.84□□□□□ -1.31
CHD2-227ENST00000637572 LTKP29376 864 aa6.84□□□□□ -1.31
CHD2-227ENST00000637572 XPCQ01831 940 aaPredicted RBP6.84□□□□□ -1.31
CHD2-227ENST00000637572 A2ML1A8K2U0 1454 aa6.84□□□□□ -1.31
CHD2-227ENST00000637572 PLA2R1Q13018 1463 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms