RNA–Protein interactions for RNA: ENST00000637490.1

SYNGAP1-221, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 132 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-221ENST00000637490 SMCR8Q8TEV9 937 aaPredicted RBP3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 C17orf50Q8WW18 174 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 TEKT1Q969V4 418 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 CCDC102AQ96A19 550 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 KIF2CQ99661 725 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 SENP7Q9BQF6 1050 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 IQCGQ9H095 443 aaKnown RBP3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 RSPH9Q9H1X1 276 aaPredicted RBP3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 VEZTQ9HBM0 779 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 ETAA1Q9NY74 926 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 SWAP70Q9UH65 585 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 RSPH14Q9UHP6 348 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 FBXO9Q9UK97 447 aaPredicted RBP3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 TBC1D2BQ9UPU7 963 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 KINO60870 393 aaKnown RBP3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 CCDC175P0C221 793 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 IMPDH2P12268 514 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 GTF2F1P35269 517 aaKnown RBP eCLIP3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 ADCY2Q08462 1091 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 CCDC173Q0VFZ6 552 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 PSMD2Q13200 908 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 BMS1Q14692 1282 aaKnown RBP3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 TSR1Q2NL82 804 aaKnown RBP3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 AP1ARQ63HQ0 302 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 LMOD2Q6P5Q4 547 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 OTUD6AQ7L8S5 288 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 TAX1BP1Q86VP1 789 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 NUTM1Q86Y26 1132 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 SUGP1Q8IWZ8 645 aaKnown RBP3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 BHMTQ93088 406 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 PRIMPOLQ96LW4 560 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 SPOCK3Q9BQ16 436 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 MMTAG2Q9BU76 263 aaKnown RBP3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 RETREG1Q9H6L5 497 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 RMI1Q9H9A7 625 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 GOPCQ9HD26 462 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 FOXD4L1Q9NU39 408 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 GNL3LQ9NVN8 582 aaKnown RBP3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 OGFRQ9NZT2 677 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 PUF60Q9UHX1 559 aaKnown RBP3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 WWC3Q9ULE0 1092 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 ODF2LQ9ULJ1 636 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 PDZRN3Q9UPQ7 1066 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 THRAP3Q9Y2W1 955 aaKnown RBP3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 KANK1Q14678 1352 aa3.08□□□□□ -1.92
SYNGAP1-221ENST00000637490 CFAP69A5D8W1 941 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 RGL2O15211 777 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 TIMM44O43615 452 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 TPPPO94811 219 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 TCF3P15923 654 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 KCNA2P16389 499 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 ATP2B1P20020 1258 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 RBM5P52756 815 aaKnown RBP eCLIP3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 FOSBP53539 338 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 RWDD2BP57060 319 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 PPP4CP60510 307 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 SRPK2P78362 688 aaKnown RBP3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 CBX1P83916 185 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 MLECQ14165 292 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 DCTN1Q14203 1278 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 PPP2R5AQ15172 486 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 NOM1Q5C9Z4 860 aaKnown RBP3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 MUM1L1Q5H9M0 696 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 SOGA3Q5TF21 947 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 TRIM74Q86UV6 250 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 TRIM73Q86UV7 250 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 MORC1Q86VD1 984 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 RBM12BQ8IXT5 1001 aaKnown RBP3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 EFCAB13Q8IY85 973 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 PDILTQ8N807 584 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 VPS37AQ8NEZ2 397 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 MYRIPQ8NFW9 859 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 TDRD7Q8NHU6 1098 aaKnown RBP3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 SREK1Q8WXA9 508 aaKnown RBP3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 RSPH1Q8WYR4 309 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 PMM1Q92871 262 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 TNPO1Q92973 898 aaKnown RBP3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 ZBTB9Q96C00 473 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 SCYL1Q96KG9 808 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 CEP89Q96ST8 783 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 SH3GL3Q99963 347 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 WDR70Q9NW82 654 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 ATP1B4Q9UN42 357 aaPredicted RBP3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 ZNF232Q9UNY5 417 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 AKAP2Q9Y2D5 859 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 R3HCC1Q9Y3T6 440 aaKnown RBP3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 CTDP1Q9Y5B0 961 aaPredicted RBP3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 PCDHGA4Q9Y5G9 962 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 STK24Q9Y6E0 443 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 ERBB4Q15303 1308 aa3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 DHX29Q7Z478 1369 aaKnown RBP3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 IBTKQ9P2D0 1353 aaPredicted RBP3.07□□□□□ -1.92
SYNGAP1-221ENST00000637490 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 A0A1B0GUL7 405 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 CCDC194A0A1B0GVG4 234 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 CAND2O75155 1236 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 FRAT2O75474 233 aaPredicted RBP3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 CDKL5O76039 1030 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 REC8O95072 547 aa3.06□□□□□ -1.92
SYNGAP1-221ENST00000637490 BAG4O95429 457 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms