RNA–Protein interactions for RNA: ENST00000636999.1

CACNA1D-220, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,212 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-220ENST00000636999 RIC3Q7Z5B4 369 aa9.51□□□□□ -0.89
CACNA1D-220ENST00000636999 NPC1L1Q9UHC9 1359 aa9.5□□□□□ -0.89
CACNA1D-220ENST00000636999 HSP90AB2PQ58FF8 381 aa9.5□□□□□ -0.89
CACNA1D-220ENST00000636999 INO80Q9ULG1 1556 aaPredicted RBP9.5□□□□□ -0.89
CACNA1D-220ENST00000636999 DIP2CQ9Y2E4 1556 aa9.5□□□□□ -0.89
CACNA1D-220ENST00000636999 METP08581 1390 aa9.5□□□□□ -0.89
CACNA1D-220ENST00000636999 PLEKHG3A1L390 1219 aa9.5□□□□□ -0.89
CACNA1D-220ENST00000636999 SLFN5Q08AF3 891 aa9.5□□□□□ -0.89
CACNA1D-220ENST00000636999 GLIPR1L2Q4G1C9 344 aa9.5□□□□□ -0.89
CACNA1D-220ENST00000636999 NGLY1Q96IV0 654 aa9.5□□□□□ -0.89
CACNA1D-220ENST00000636999 POLKQ9UBT6 870 aa9.5□□□□□ -0.89
CACNA1D-220ENST00000636999 PIK3C2GO75747 1445 aa9.5□□□□□ -0.89
CACNA1D-220ENST00000636999 GOLGA6L3A6NEY3 463 aa9.5□□□□□ -0.89
CACNA1D-220ENST00000636999 FBLN1P23142 703 aa9.5□□□□□ -0.89
CACNA1D-220ENST00000636999 USHBP1Q8N6Y0 703 aa9.5□□□□□ -0.89
CACNA1D-220ENST00000636999 NPHP4O75161 1426 aaPredicted RBP9.5□□□□□ -0.89
CACNA1D-220ENST00000636999 ZFYVE9O95405 1425 aa9.5□□□□□ -0.89
CACNA1D-220ENST00000636999 LMTK3Q96Q04 1460 aa9.5□□□□□ -0.89
CACNA1D-220ENST00000636999 FRAT2O75474 233 aaPredicted RBP9.49□□□□□ -0.89
CACNA1D-220ENST00000636999 PTMAP06454 111 aaKnown RBP9.49□□□□□ -0.89
CACNA1D-220ENST00000636999 AIMP1Q12904 312 aaKnown RBP9.49□□□□□ -0.89
CACNA1D-220ENST00000636999 ANKRD24Q8TF21 1146 aa9.49□□□□□ -0.89
CACNA1D-220ENST00000636999 GBP4Q96PP9 640 aa9.49□□□□□ -0.89
CACNA1D-220ENST00000636999 RBM42Q9BTD8 480 aaKnown RBP9.49□□□□□ -0.89
CACNA1D-220ENST00000636999 EDC4Q6P2E9 1401 aaKnown RBP9.49□□□□□ -0.89
CACNA1D-220ENST00000636999 POLR3AO14802 1390 aaPredicted RBP9.49□□□□□ -0.89
CACNA1D-220ENST00000636999 BTBD11A6QL63 1104 aa9.49□□□□□ -0.89
CACNA1D-220ENST00000636999 PDE3AQ14432 1141 aa9.49□□□□□ -0.89
CACNA1D-220ENST00000636999 LRRC59Q96AG4 307 aaKnown RBP9.49□□□□□ -0.89
CACNA1D-220ENST00000636999 LNPKQ9C0E8 428 aa9.49□□□□□ -0.89
CACNA1D-220ENST00000636999 ZRANB1Q9UGI0 708 aa9.49□□□□□ -0.89
CACNA1D-220ENST00000636999 GCP02774 474 aa9.48□□□□□ -0.89
CACNA1D-220ENST00000636999 MCCP23508 829 aa9.48□□□□□ -0.89
CACNA1D-220ENST00000636999 CHRNA2Q15822 529 aa9.48□□□□□ -0.89
CACNA1D-220ENST00000636999 ORAI2Q96SN7 254 aa9.48□□□□□ -0.89
CACNA1D-220ENST00000636999 LMTK2Q8IWU2 1503 aa9.48□□□□□ -0.89
CACNA1D-220ENST00000636999 KIAA1211Q6ZU35 1233 aa9.48□□□□□ -0.89
CACNA1D-220ENST00000636999 AGLP35573 1532 aa9.48□□□□□ -0.89
CACNA1D-220ENST00000636999 FLT4P35916 1363 aa9.48□□□□□ -0.89
CACNA1D-220ENST00000636999 PIK3R4Q99570 1358 aa9.48□□□□□ -0.89
CACNA1D-220ENST00000636999 RNF17Q9BXT8 1623 aaKnown RBP9.48□□□□□ -0.89
CACNA1D-220ENST00000636999 SLC4A2P04920 1241 aa9.48□□□□□ -0.89
CACNA1D-220ENST00000636999 PDZRN3Q9UPQ7 1066 aa9.48□□□□□ -0.89
CACNA1D-220ENST00000636999 A2ML1A8K2U0 1454 aa9.48□□□□□ -0.89
CACNA1D-220ENST00000636999 KDM5CP41229 1560 aa9.48□□□□□ -0.89
CACNA1D-220ENST00000636999 TAF7Q15545 349 aaPredicted RBP9.48□□□□□ -0.89
CACNA1D-220ENST00000636999 MCM10Q7L590 875 aa9.48□□□□□ -0.89
CACNA1D-220ENST00000636999 IL27Q8NEV9 243 aa9.48□□□□□ -0.89
CACNA1D-220ENST00000636999 IFT57Q9NWB7 429 aa9.48□□□□□ -0.89
CACNA1D-220ENST00000636999 PLEKHH1Q9ULM0 1364 aa9.47□□□□□ -0.89
CACNA1D-220ENST00000636999 DUSP27Q5VZP5 1158 aa9.47□□□□□ -0.89
CACNA1D-220ENST00000636999 GNAI3P08754 354 aa9.47□□□□□ -0.89
CACNA1D-220ENST00000636999 FGD1P98174 961 aa9.47□□□□□ -0.89
CACNA1D-220ENST00000636999 THUMPD2Q9BTF0 503 aaKnown RBP9.47□□□□□ -0.89
CACNA1D-220ENST00000636999 PHF23Q9BUL5 403 aaPredicted RBP9.47□□□□□ -0.89
CACNA1D-220ENST00000636999 PLCB2Q00722 1185 aa9.47□□□□□ -0.89
CACNA1D-220ENST00000636999 SLAIN2Q9P270 581 aa9.47□□□□□ -0.89
CACNA1D-220ENST00000636999 TRIM6-TRIM34B2RNG4 842 aa9.46□□□□□ -0.89
CACNA1D-220ENST00000636999 UBTFL1P0CB47 393 aaPredicted RBP9.46□□□□□ -0.89
CACNA1D-220ENST00000636999 DCTN1Q14203 1278 aa9.46□□□□□ -0.89
CACNA1D-220ENST00000636999 BRPF3Q9ULD4 1205 aa9.46□□□□□ -0.89
CACNA1D-220ENST00000636999 KIDINS220Q9ULH0 1771 aa9.46□□□□□ -0.9
CACNA1D-220ENST00000636999 EXOC5O00471 708 aa9.46□□□□□ -0.9
CACNA1D-220ENST00000636999 CLTCL1P53675 1640 aa9.46□□□□□ -0.9
CACNA1D-220ENST00000636999 SPHKAPQ2M3C7 1700 aa9.46□□□□□ -0.9
CACNA1D-220ENST00000636999 EIF4A2Q14240 407 aaKnown RBP9.45□□□□□ -0.9
CACNA1D-220ENST00000636999 IFNL2Q8IZJ0 200 aa9.45□□□□□ -0.9
CACNA1D-220ENST00000636999 C22orf23Q9BZE7 217 aa9.45□□□□□ -0.9
CACNA1D-220ENST00000636999 HSP90AB4PQ58FF6 505 aa9.45□□□□□ -0.9
CACNA1D-220ENST00000636999 ATF7IPQ6VMQ6 1270 aa9.45□□□□□ -0.9
CACNA1D-220ENST00000636999 CABLES1Q8TDN4 633 aa9.45□□□□□ -0.9
CACNA1D-220ENST00000636999 NOB1Q9ULX3 412 aaKnown RBP9.45□□□□□ -0.9
CACNA1D-220ENST00000636999 MAP3K19Q56UN5 1328 aa9.45□□□□□ -0.9
CACNA1D-220ENST00000636999 HMGB2P26583 209 aaKnown RBP9.45□□□□□ -0.9
CACNA1D-220ENST00000636999 NOL8Q76FK4 1167 aaKnown RBP9.45□□□□□ -0.9
CACNA1D-220ENST00000636999 ABCA6Q8N139 1617 aa9.45□□□□□ -0.9
CACNA1D-220ENST00000636999 FAM135BQ49AJ0 1406 aa9.44□□□□□ -0.9
CACNA1D-220ENST00000636999 TMEM94Q12767 1356 aa9.44□□□□□ -0.9
CACNA1D-220ENST00000636999 DNTTIP2Q5QJE6 756 aaKnown RBP9.44□□□□□ -0.9
CACNA1D-220ENST00000636999 MPRIPQ6WCQ1 1025 aa9.44□□□□□ -0.9
CACNA1D-220ENST00000636999 KIF6Q6ZMV9 814 aa9.44□□□□□ -0.9
CACNA1D-220ENST00000636999 HSP90B1P14625 803 aaKnown RBP9.44□□□□□ -0.9
CACNA1D-220ENST00000636999 G3BP1Q13283 466 aaKnown RBP eCLIP9.44□□□□□ -0.9
CACNA1D-220ENST00000636999 IP6K1Q92551 441 aa9.44□□□□□ -0.9
CACNA1D-220ENST00000636999 TMOD3Q9NYL9 352 aa9.44□□□□□ -0.9
CACNA1D-220ENST00000636999 CCT4P50991 539 aaKnown RBP9.44□□□□□ -0.9
CACNA1D-220ENST00000636999 ARHGEF40Q8TER5 1519 aa9.44□□□□□ -0.9
CACNA1D-220ENST00000636999 ROBO2Q9HCK4 1378 aa9.44□□□□□ -0.9
CACNA1D-220ENST00000636999 CEP152O94986 1710 aa9.43□□□□□ -0.9
CACNA1D-220ENST00000636999 IL16Q14005 1332 aa9.43□□□□□ -0.9
CACNA1D-220ENST00000636999 FOXD4L5Q5VV16 416 aaPredicted RBP9.43□□□□□ -0.9
CACNA1D-220ENST00000636999 FOXD4L4Q8WXT5 416 aaPredicted RBP9.43□□□□□ -0.9
CACNA1D-220ENST00000636999 MIS18AQ9NYP9 233 aa9.43□□□□□ -0.9
CACNA1D-220ENST00000636999 CHMP5Q9NZZ3 219 aa9.43□□□□□ -0.9
CACNA1D-220ENST00000636999 MAP3K4Q9Y6R4 1608 aa9.42□□□□□ -0.9
CACNA1D-220ENST00000636999 E9PCH4 1651 aa9.42□□□□□ -0.9
CACNA1D-220ENST00000636999 ARHGEF10O15013 1369 aa9.42□□□□□ -0.9
CACNA1D-220ENST00000636999 STARD3NLO95772 234 aa9.42□□□□□ -0.9
CACNA1D-220ENST00000636999 HOXC9P31274 260 aa9.42□□□□□ -0.9
CACNA1D-220ENST00000636999 SRCIN1Q9C0H9 1055 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms