RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 TMEM94Q12767 1356 aa20.67■□□□□ 0.9
CACNA1A-231ENST00000636816 CRBNQ96SW2 442 aa20.66■□□□□ 0.9
CACNA1A-231ENST00000636816 NEFMP07197 916 aa20.66■□□□□ 0.9
CACNA1A-231ENST00000636816 NFE2L2Q16236 605 aa20.66■□□□□ 0.9
CACNA1A-231ENST00000636816 SULT6B1Q6IMI4 303 aa20.66■□□□□ 0.9
CACNA1A-231ENST00000636816 SBNO1A3KN83 1393 aa20.65■□□□□ 0.9
CACNA1A-231ENST00000636816 CCDC136Q96JN2 1154 aa20.65■□□□□ 0.9
CACNA1A-231ENST00000636816 MYH16Q9H6N6 1097 aa20.65■□□□□ 0.9
CACNA1A-231ENST00000636816 STRCQ7RTU9 1775 aa20.65■□□□□ 0.9
CACNA1A-231ENST00000636816 USP54Q70EL1 1684 aa20.65■□□□□ 0.9
CACNA1A-231ENST00000636816 AMPHP49418 695 aa20.65■□□□□ 0.9
CACNA1A-231ENST00000636816 RGPD1P0DJD0 1748 aa20.64■□□□□ 0.89
CACNA1A-231ENST00000636816 DLG5Q8TDM6 1919 aa20.64■□□□□ 0.89
CACNA1A-231ENST00000636816 C1orf167Q5SNV9 1468 aa20.63■□□□□ 0.89
CACNA1A-231ENST00000636816 FANCIQ9NVI1 1328 aa20.63■□□□□ 0.89
CACNA1A-231ENST00000636816 FLT4P35916 1363 aa20.63■□□□□ 0.89
CACNA1A-231ENST00000636816 THUMPD2Q9BTF0 503 aaKnown RBP20.63■□□□□ 0.89
CACNA1A-231ENST00000636816 RARSP54136 660 aaKnown RBP20.61■□□□□ 0.89
CACNA1A-231ENST00000636816 PLEKHG5O94827 1062 aa20.6■□□□□ 0.89
CACNA1A-231ENST00000636816 ATF3P18847 181 aa20.6■□□□□ 0.89
CACNA1A-231ENST00000636816 HOXC9P31274 260 aa20.6■□□□□ 0.89
CACNA1A-231ENST00000636816 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.6■□□□□ 0.89
CACNA1A-231ENST00000636816 IL16Q14005 1332 aa20.6■□□□□ 0.89
CACNA1A-231ENST00000636816 EXOSC9Q06265 439 aaKnown RBP20.59■□□□□ 0.89
CACNA1A-231ENST00000636816 KRT28Q7Z3Y7 464 aa20.59■□□□□ 0.89
CACNA1A-231ENST00000636816 TSHZ2Q9NRE2 1034 aa20.59■□□□□ 0.89
CACNA1A-231ENST00000636816 FAM83GA6ND36 823 aa20.58■□□□□ 0.89
CACNA1A-231ENST00000636816 EYA1Q99502 592 aa20.58■□□□□ 0.89
CACNA1A-231ENST00000636816 BCL2L13Q9BXK5 485 aa20.58■□□□□ 0.89
CACNA1A-231ENST00000636816 MST1RQ04912 1400 aa20.58■□□□□ 0.89
CACNA1A-231ENST00000636816 DDX17Q92841 729 aaKnown RBP20.57■□□□□ 0.88
CACNA1A-231ENST00000636816 LAS1LQ9Y4W2 734 aaKnown RBP20.57■□□□□ 0.88
CACNA1A-231ENST00000636816 LTN1O94822 1766 aa20.57■□□□□ 0.88
CACNA1A-231ENST00000636816 XIRP1Q702N8 1843 aaKnown RBP20.57■□□□□ 0.88
CACNA1A-231ENST00000636816 DCTN1Q14203 1278 aa20.56■□□□□ 0.88
CACNA1A-231ENST00000636816 LMOD2Q6P5Q4 547 aa20.56■□□□□ 0.88
CACNA1A-231ENST00000636816 LTV1Q96GA3 475 aaPredicted RBP20.56■□□□□ 0.88
CACNA1A-231ENST00000636816 TRPM3Q9HCF6 1732 aaPredicted RBP20.56■□□□□ 0.88
CACNA1A-231ENST00000636816 ARHGEF10O15013 1369 aa20.55■□□□□ 0.88
CACNA1A-231ENST00000636816 NFAT5O94916 1531 aa20.55■□□□□ 0.88
CACNA1A-231ENST00000636816 NCOA3Q9Y6Q9 1424 aa20.55■□□□□ 0.88
CACNA1A-231ENST00000636816 ZBTB7CA1YPR0 619 aa20.54■□□□□ 0.88
CACNA1A-231ENST00000636816 FRAT1Q92837 279 aaPredicted RBP20.54■□□□□ 0.88
CACNA1A-231ENST00000636816 KIF1AQ12756 1690 aa20.54■□□□□ 0.88
CACNA1A-231ENST00000636816 IGSF1Q8N6C5 1336 aa20.54■□□□□ 0.88
CACNA1A-231ENST00000636816 ZNF335Q9H4Z2 1342 aaPredicted RBP20.53■□□□□ 0.88
CACNA1A-231ENST00000636816 KIF24Q5T7B8 1368 aa20.53■□□□□ 0.88
CACNA1A-231ENST00000636816 DCCP43146 1447 aa20.52■□□□□ 0.88
CACNA1A-231ENST00000636816 TNNQ9UQP3 1299 aa20.52■□□□□ 0.88
CACNA1A-231ENST00000636816 GCP02774 474 aa20.51■□□□□ 0.87
CACNA1A-231ENST00000636816 CADPS2Q86UW7 1296 aa20.51■□□□□ 0.87
CACNA1A-231ENST00000636816 KCNH5Q8NCM2 988 aa20.51■□□□□ 0.87
CACNA1A-231ENST00000636816 PANK1Q8TE04 598 aa20.51■□□□□ 0.87
CACNA1A-231ENST00000636816 IP6K1Q92551 441 aa20.51■□□□□ 0.87
CACNA1A-231ENST00000636816 KDRP35968 1356 aa20.51■□□□□ 0.87
CACNA1A-231ENST00000636816 CANXP27824 592 aaKnown RBP20.5■□□□□ 0.87
CACNA1A-231ENST00000636816 ZNF853P0CG23 659 aa20.5■□□□□ 0.87
CACNA1A-231ENST00000636816 LMOD3Q0VAK6 560 aa20.5■□□□□ 0.87
CACNA1A-231ENST00000636816 MTHFSDQ2M296 383 aaKnown RBP20.5■□□□□ 0.87
CACNA1A-231ENST00000636816 MSH6P52701 1360 aa20.5■□□□□ 0.87
CACNA1A-231ENST00000636816 CT47B1P0C2W7 299 aaPredicted RBP20.48■□□□□ 0.87
CACNA1A-231ENST00000636816 CALD1Q05682 793 aaKnown RBP20.48■□□□□ 0.87
CACNA1A-231ENST00000636816 PDE3AQ14432 1141 aa20.48■□□□□ 0.87
CACNA1A-231ENST00000636816 MCM10Q7L590 875 aa20.48■□□□□ 0.87
CACNA1A-231ENST00000636816 USHBP1Q8N6Y0 703 aa20.48■□□□□ 0.87
CACNA1A-231ENST00000636816 SSH1Q8WYL5 1049 aa20.48■□□□□ 0.87
CACNA1A-231ENST00000636816 MBIPQ9NS73 344 aa20.48■□□□□ 0.87
CACNA1A-231ENST00000636816 IFT57Q9NWB7 429 aa20.48■□□□□ 0.87
CACNA1A-231ENST00000636816 RTL1A6NKG5 1358 aa20.48■□□□□ 0.87
CACNA1A-231ENST00000636816 GNAI1P63096 354 aa20.48■□□□□ 0.87
CACNA1A-231ENST00000636816 SLIT3O75094 1523 aa20.47■□□□□ 0.87
CACNA1A-231ENST00000636816 ARHGEF25Q86VW2 580 aa20.46■□□□□ 0.87
CACNA1A-231ENST00000636816 CFAP44Q96MT7 982 aa20.46■□□□□ 0.87
CACNA1A-231ENST00000636816 COG6Q9Y2V7 657 aa20.46■□□□□ 0.87
CACNA1A-231ENST00000636816 USP19O94966 1318 aa20.46■□□□□ 0.87
CACNA1A-231ENST00000636816 ALS2Q96Q42 1657 aa20.46■□□□□ 0.87
CACNA1A-231ENST00000636816 RLBP1P12271 317 aa20.46■□□□□ 0.87
CACNA1A-231ENST00000636816 TSPYL6Q8N831 410 aa20.46■□□□□ 0.87
CACNA1A-231ENST00000636816 RGPD2P0DJD1 1756 aa20.45■□□□□ 0.86
CACNA1A-231ENST00000636816 SMC4Q9NTJ3 1288 aa20.45■□□□□ 0.86
CACNA1A-231ENST00000636816 NBPF6Q5VWK0 638 aa20.45■□□□□ 0.86
CACNA1A-231ENST00000636816 CLUAP1Q96AJ1 413 aa20.45■□□□□ 0.86
CACNA1A-231ENST00000636816 NBPF4Q96M43 638 aa20.45■□□□□ 0.86
CACNA1A-231ENST00000636816 ELL2O00472 640 aaPredicted RBP20.44■□□□□ 0.86
CACNA1A-231ENST00000636816 LRRC59Q96AG4 307 aaKnown RBP20.43■□□□□ 0.86
CACNA1A-231ENST00000636816 MED1Q15648 1581 aaPredicted RBP20.43■□□□□ 0.86
CACNA1A-231ENST00000636816 PHRF1Q9P1Y6 1649 aaKnown RBP20.43■□□□□ 0.86
CACNA1A-231ENST00000636816 VAMP4O75379 141 aa20.43■□□□□ 0.86
CACNA1A-231ENST00000636816 C8orf58Q8NAV2 365 aa20.42■□□□□ 0.86
CACNA1A-231ENST00000636816 AXIN2Q9Y2T1 843 aa20.42■□□□□ 0.86
CACNA1A-231ENST00000636816 ZC3H6P61129 1189 aaKnown RBP20.41■□□□□ 0.86
CACNA1A-231ENST00000636816 BRINP3Q76B58 766 aa20.41■□□□□ 0.86
CACNA1A-231ENST00000636816 NPHP3Q7Z494 1330 aa20.41■□□□□ 0.86
CACNA1A-231ENST00000636816 ZKSCAN2Q63HK3 967 aa20.41■□□□□ 0.86
CACNA1A-231ENST00000636816 CABLES1Q8TDN4 633 aa20.41■□□□□ 0.86
CACNA1A-231ENST00000636816 NOB1Q9ULX3 412 aaKnown RBP20.41■□□□□ 0.86
CACNA1A-231ENST00000636816 RGPD5Q99666 1765 aa20.4■□□□□ 0.86
CACNA1A-231ENST00000636816 CRB1P82279 1406 aa20.4■□□□□ 0.86
CACNA1A-231ENST00000636816 GAS2L2Q8NHY3 880 aa20.39■□□□□ 0.86
CACNA1A-231ENST00000636816 PXDNQ92626 1479 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms