RNA–Protein interactions for RNA: ENST00000636775.1

LGI1-223, Transcript of leucine rich glioma inactivated 1, human

TSL 5

Gene LGI1, Length 2,050 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGI1-223	ENST00000636775	PNN	Q9H307	717 aa	Known RBP	12.21	□□□□□ -0.45
LGI1-223	ENST00000636775	RBM33	Q96EV2	1170 aa	Known RBP	12.2	□□□□□ -0.46
LGI1-223	ENST00000636775	BCAR3	O75815	825 aa		12.2	□□□□□ -0.46
LGI1-223	ENST00000636775	HMOX1	P09601	288 aa		12.2	□□□□□ -0.46
LGI1-223	ENST00000636775	PRKAR2B	P31323	418 aa		12.2	□□□□□ -0.46
LGI1-223	ENST00000636775	HSPA1L	P34931	641 aa		12.2	□□□□□ -0.46
LGI1-223	ENST00000636775	MSH6	P52701	1360 aa		12.18	□□□□□ -0.46
LGI1-223	ENST00000636775	TRPM3	Q9HCF6	1732 aa	Predicted RBP	12.18	□□□□□ -0.46
LGI1-223	ENST00000636775	ROBO1	Q9Y6N7	1651 aa		12.18	□□□□□ -0.46
LGI1-223	ENST00000636775	RIPK4	P57078	832 aa		12.18	□□□□□ -0.46
LGI1-223	ENST00000636775	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	12.18	□□□□□ -0.46
LGI1-223	ENST00000636775	RGPD2	P0DJD1	1756 aa		12.17	□□□□□ -0.46
LGI1-223	ENST00000636775	PHACTR3	Q96KR7	559 aa		12.17	□□□□□ -0.46
LGI1-223	ENST00000636775	KIF1A	Q12756	1690 aa		12.17	□□□□□ -0.46
LGI1-223	ENST00000636775	MYH16	Q9H6N6	1097 aa		12.17	□□□□□ -0.46
LGI1-223	ENST00000636775	FANCI	Q9NVI1	1328 aa		12.16	□□□□□ -0.46
LGI1-223	ENST00000636775	EIF4A2	Q14240	407 aa	Known RBP	12.16	□□□□□ -0.46
LGI1-223	ENST00000636775	IL16	Q14005	1332 aa		12.16	□□□□□ -0.46
LGI1-223	ENST00000636775	SOX12	O15370	315 aa		12.15	□□□□□ -0.46
LGI1-223	ENST00000636775	PHF8	Q9UPP1	1060 aa		12.15	□□□□□ -0.46
LGI1-223	ENST00000636775	MAP3K19	Q56UN5	1328 aa		12.15	□□□□□ -0.46
LGI1-223	ENST00000636775	VIRMA	Q69YN4	1812 aa	Known RBP	12.15	□□□□□ -0.46
LGI1-223	ENST00000636775	RARS	P54136	660 aa	Known RBP	12.15	□□□□□ -0.46
LGI1-223	ENST00000636775	NFE2L2	Q16236	605 aa		12.15	□□□□□ -0.46
LGI1-223	ENST00000636775	TSR2	Q969E8	191 aa	Known RBP	12.15	□□□□□ -0.46
LGI1-223	ENST00000636775	PHRF1	Q9P1Y6	1649 aa	Known RBP	12.14	□□□□□ -0.47
LGI1-223	ENST00000636775	SBNO1	A3KN83	1393 aa		12.14	□□□□□ -0.47
LGI1-223	ENST00000636775	NEFM	P07197	916 aa		12.14	□□□□□ -0.47
LGI1-223	ENST00000636775	HSP90AB2P	Q58FF8	381 aa		12.14	□□□□□ -0.47
LGI1-223	ENST00000636775	RGPD5	Q99666	1765 aa		12.14	□□□□□ -0.47
LGI1-223	ENST00000636775	DCC	P43146	1447 aa		12.13	□□□□□ -0.47
LGI1-223	ENST00000636775	FLT4	P35916	1363 aa		12.13	□□□□□ -0.47
LGI1-223	ENST00000636775	NLRP6	P59044	892 aa		12.13	□□□□□ -0.47
LGI1-223	ENST00000636775	NFAT5	O94916	1531 aa		12.13	□□□□□ -0.47
LGI1-223	ENST00000636775	MED1	Q15648	1581 aa	Predicted RBP	12.13	□□□□□ -0.47
LGI1-223	ENST00000636775	ALS2	Q96Q42	1657 aa		12.12	□□□□□ -0.47
LGI1-223	ENST00000636775	AEBP1	Q8IUX7	1158 aa		12.12	□□□□□ -0.47
LGI1-223	ENST00000636775	C19orf44	Q9H6X5	657 aa		12.12	□□□□□ -0.47
LGI1-223	ENST00000636775	EXOSC9	Q06265	439 aa	Known RBP	12.12	□□□□□ -0.47
LGI1-223	ENST00000636775	NUTM2G	Q5VZR2	741 aa		12.12	□□□□□ -0.47
LGI1-223	ENST00000636775	SLAIN2	Q9P270	581 aa		12.12	□□□□□ -0.47
LGI1-223	ENST00000636775	ESCO1	Q5FWF5	840 aa		12.11	□□□□□ -0.47
LGI1-223	ENST00000636775	SULT6B1	Q6IMI4	303 aa		12.11	□□□□□ -0.47
LGI1-223	ENST00000636775	C14orf37	Q86TY3	774 aa		12.11	□□□□□ -0.47
LGI1-223	ENST00000636775	ARHGEF10	O15013	1369 aa		12.11	□□□□□ -0.47
LGI1-223	ENST00000636775	PAK3	O75914	559 aa	Predicted RBP	12.1	□□□□□ -0.47
LGI1-223	ENST00000636775	CADPS2	Q86UW7	1296 aa		12.1	□□□□□ -0.47
LGI1-223	ENST00000636775	ABTB2	Q8N961	1025 aa		12.1	□□□□□ -0.47
LGI1-223	ENST00000636775	BCL2L13	Q9BXK5	485 aa		12.1	□□□□□ -0.47
LGI1-223	ENST00000636775	RBM19	Q9Y4C8	960 aa	Known RBP	12.1	□□□□□ -0.47
LGI1-223	ENST00000636775	PHLPP1	O60346	1717 aa		12.1	□□□□□ -0.47
LGI1-223	ENST00000636775	CT47B1	P0C2W7	299 aa	Predicted RBP	12.1	□□□□□ -0.47
LGI1-223	ENST00000636775	PDE3A	Q14432	1141 aa		12.1	□□□□□ -0.47
LGI1-223	ENST00000636775	THUMPD2	Q9BTF0	503 aa	Known RBP	12.1	□□□□□ -0.47
LGI1-223	ENST00000636775	FRAT1	Q92837	279 aa	Predicted RBP	12.09	□□□□□ -0.47
LGI1-223	ENST00000636775	KIF24	Q5T7B8	1368 aa		12.09	□□□□□ -0.47
LGI1-223	ENST00000636775	SLIT3	O75094	1523 aa		12.09	□□□□□ -0.47
LGI1-223	ENST00000636775	LRRC37A3	O60309	1634 aa		12.09	□□□□□ -0.47
LGI1-223	ENST00000636775	ATF3	P18847	181 aa		12.09	□□□□□ -0.47
LGI1-223	ENST00000636775	CANX	P27824	592 aa	Known RBP	12.09	□□□□□ -0.47
LGI1-223	ENST00000636775	AMPH	P49418	695 aa		12.09	□□□□□ -0.47
LGI1-223	ENST00000636775	ORAI2	Q96SN7	254 aa		12.09	□□□□□ -0.47
LGI1-223	ENST00000636775	TNN	Q9UQP3	1299 aa		12.09	□□□□□ -0.47
LGI1-223	ENST00000636775	C1orf167	Q5SNV9	1468 aa		12.08	□□□□□ -0.48
LGI1-223	ENST00000636775	PANK1	Q8TE04	598 aa		12.08	□□□□□ -0.48
LGI1-223	ENST00000636775	KDM2B	Q8NHM5	1336 aa		12.08	□□□□□ -0.48
LGI1-223	ENST00000636775	KDR	P35968	1356 aa		12.08	□□□□□ -0.48
LGI1-223	ENST00000636775	COL16A1	Q07092	1604 aa	Predicted RBP	12.08	□□□□□ -0.48
LGI1-223	ENST00000636775	AHDC1	Q5TGY3	1603 aa	Predicted RBP	12.08	□□□□□ -0.48
LGI1-223	ENST00000636775	PSME1	Q06323	249 aa		12.07	□□□□□ -0.48
LGI1-223	ENST00000636775	IGSF1	Q8N6C5	1336 aa		12.07	□□□□□ -0.48
LGI1-223	ENST00000636775	CRYBG1	Q9Y4K1	1723 aa		12.07	□□□□□ -0.48
LGI1-223	ENST00000636775	FAM83G	A6ND36	823 aa		12.07	□□□□□ -0.48
LGI1-223	ENST00000636775	ZNF853	P0CG23	659 aa		12.07	□□□□□ -0.48
LGI1-223	ENST00000636775	HOXC9	P31274	260 aa		12.07	□□□□□ -0.48
LGI1-223	ENST00000636775	LMOD3	Q0VAK6	560 aa		12.07	□□□□□ -0.48
LGI1-223	ENST00000636775	COG6	Q9Y2V7	657 aa		12.07	□□□□□ -0.48
LGI1-223	ENST00000636775	LAS1L	Q9Y4W2	734 aa	Known RBP	12.07	□□□□□ -0.48
LGI1-223	ENST00000636775	MST1R	Q04912	1400 aa		12.06	□□□□□ -0.48
LGI1-223	ENST00000636775	RTL1	A6NKG5	1358 aa		12.06	□□□□□ -0.48
LGI1-223	ENST00000636775	RLBP1	P12271	317 aa		12.06	□□□□□ -0.48
LGI1-223	ENST00000636775	CALD1	Q05682	793 aa	Known RBP	12.06	□□□□□ -0.48
LGI1-223	ENST00000636775	IFT57	Q9NWB7	429 aa		12.06	□□□□□ -0.48
LGI1-223	ENST00000636775	DCTN1	Q14203	1278 aa		12.06	□□□□□ -0.48
LGI1-223	ENST00000636775	SSH1	Q8WYL5	1049 aa		12.06	□□□□□ -0.48
LGI1-223	ENST00000636775	EYA1	Q99502	592 aa		12.06	□□□□□ -0.48
LGI1-223	ENST00000636775	CAMTA1	Q9Y6Y1	1673 aa		12.05	□□□□□ -0.48
LGI1-223	ENST00000636775	NHSL1	Q5SYE7	1610 aa		12.05	□□□□□ -0.48
LGI1-223	ENST00000636775	GNAI1	P63096	354 aa		12.05	□□□□□ -0.48
LGI1-223	ENST00000636775	SMC4	Q9NTJ3	1288 aa		12.05	□□□□□ -0.48
LGI1-223	ENST00000636775	FOXO3	O43524	673 aa		12.04	□□□□□ -0.48
LGI1-223	ENST00000636775	MBIP	Q9NS73	344 aa		12.04	□□□□□ -0.48
LGI1-223	ENST00000636775	XPC	Q01831	940 aa	Predicted RBP	12.04	□□□□□ -0.48
LGI1-223	ENST00000636775	ZKSCAN2	Q63HK3	967 aa		12.04	□□□□□ -0.48
LGI1-223	ENST00000636775	LMO7	Q8WWI1	1683 aa		12.03	□□□□□ -0.48
LGI1-223	ENST00000636775	CACNA1F	O60840	1977 aa		12.03	□□□□□ -0.48
LGI1-223	ENST00000636775	CENPQ	Q7L2Z9	268 aa	Predicted RBP	12.03	□□□□□ -0.48
LGI1-223	ENST00000636775	CLUAP1	Q96AJ1	413 aa		12.03	□□□□□ -0.48
LGI1-223	ENST00000636775	CFAP44	Q96MT7	982 aa		12.03	□□□□□ -0.48
LGI1-223	ENST00000636775	ILDR2	Q71H61	639 aa		12.02	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms