RNA–Protein interactions for RNA: ENST00000636769.1

SCN2A-213, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-213ENST00000636769 EPB41L2O43491 1005 aaKnown RBP7.19□□□□□ -1.26
SCN2A-213ENST00000636769 PLEKHG5O94827 1062 aa7.19□□□□□ -1.26
SCN2A-213ENST00000636769 RBM25P49756 843 aaKnown RBP7.19□□□□□ -1.26
SCN2A-213ENST00000636769 ERC1Q8IUD2 1116 aa7.19□□□□□ -1.26
SCN2A-213ENST00000636769 SRRTQ9BXP5 876 aaKnown RBP7.19□□□□□ -1.26
SCN2A-213ENST00000636769 SOX12O15370 315 aa7.19□□□□□ -1.26
SCN2A-213ENST00000636769 KIF5CO60282 957 aa7.19□□□□□ -1.26
SCN2A-213ENST00000636769 ANO10Q9NW15 660 aa7.19□□□□□ -1.26
SCN2A-213ENST00000636769 STK26Q9P289 416 aa7.19□□□□□ -1.26
SCN2A-213ENST00000636769 FANCD2Q9BXW9 1451 aa7.19□□□□□ -1.26
SCN2A-213ENST00000636769 CLASRPQ8N2M8 674 aaKnown RBP7.19□□□□□ -1.26
SCN2A-213ENST00000636769 MVPQ14764 893 aaKnown RBP7.19□□□□□ -1.26
SCN2A-213ENST00000636769 SENP3Q9H4L4 574 aaPredicted RBP7.19□□□□□ -1.26
SCN2A-213ENST00000636769 ADAMTS8Q9UP79 889 aa7.19□□□□□ -1.26
SCN2A-213ENST00000636769 LARP1BQ659C4 914 aaKnown RBP7.18□□□□□ -1.26
SCN2A-213ENST00000636769 CCDC91Q7Z6B0 441 aa7.18□□□□□ -1.26
SCN2A-213ENST00000636769 COG3Q96JB2 828 aa7.18□□□□□ -1.26
SCN2A-213ENST00000636769 ZKSCAN5Q9Y2L8 839 aa7.18□□□□□ -1.26
SCN2A-213ENST00000636769 V9GYY5 206 aaPredicted RBP7.18□□□□□ -1.26
SCN2A-213ENST00000636769 AMPHP49418 695 aa7.18□□□□□ -1.26
SCN2A-213ENST00000636769 FKBP5Q13451 457 aaPredicted RBP7.18□□□□□ -1.26
SCN2A-213ENST00000636769 SART3Q15020 963 aaKnown RBP7.18□□□□□ -1.26
SCN2A-213ENST00000636769 SEPT7Q16181 437 aaKnown RBP7.18□□□□□ -1.26
SCN2A-213ENST00000636769 TUBBP07437 444 aa7.18□□□□□ -1.26
SCN2A-213ENST00000636769 MAPK8IP2Q13387 824 aaPredicted RBP7.18□□□□□ -1.26
SCN2A-213ENST00000636769 CHD1LQ86WJ1 897 aa7.18□□□□□ -1.26
SCN2A-213ENST00000636769 OGFRQ9NZT2 677 aa7.18□□□□□ -1.26
SCN2A-213ENST00000636769 ME1P48163 572 aa7.18□□□□□ -1.26
SCN2A-213ENST00000636769 SMC1AQ14683 1233 aaKnown RBP7.17□□□□□ -1.26
SCN2A-213ENST00000636769 ENOX2Q16206 610 aaKnown RBP7.17□□□□□ -1.26
SCN2A-213ENST00000636769 GIGYF2Q6Y7W6 1299 aaKnown RBP7.17□□□□□ -1.26
SCN2A-213ENST00000636769 DDX19AQ9NUU7 478 aaKnown RBP7.17□□□□□ -1.26
SCN2A-213ENST00000636769 RBM28Q9NW13 759 aaKnown RBP7.17□□□□□ -1.26
SCN2A-213ENST00000636769 CASQ1P31415 396 aa7.17□□□□□ -1.26
SCN2A-213ENST00000636769 KRT32Q14532 448 aa7.17□□□□□ -1.26
SCN2A-213ENST00000636769 UBTFL1P0CB47 393 aaPredicted RBP7.17□□□□□ -1.26
SCN2A-213ENST00000636769 GABPB1Q06547 395 aaPredicted RBP7.17□□□□□ -1.26
SCN2A-213ENST00000636769 VPS53Q5VIR6 699 aa7.17□□□□□ -1.26
SCN2A-213ENST00000636769 TNPO1Q92973 898 aaKnown RBP7.17□□□□□ -1.26
SCN2A-213ENST00000636769 CDCA7LQ96GN5 454 aa7.17□□□□□ -1.26
SCN2A-213ENST00000636769 BCL11BQ9C0K0 894 aaPredicted RBP7.17□□□□□ -1.26
SCN2A-213ENST00000636769 IPO4Q8TEX9 1081 aaKnown RBP7.17□□□□□ -1.26
SCN2A-213ENST00000636769 RASSF4Q9H2L5 321 aa7.17□□□□□ -1.26
SCN2A-213ENST00000636769 XRCC6P12956 609 aaKnown RBP eCLIP7.17□□□□□ -1.26
SCN2A-213ENST00000636769 SKIDA1Q1XH10 827 aa7.17□□□□□ -1.26
SCN2A-213ENST00000636769 JPH4Q96JJ6 628 aa7.17□□□□□ -1.26
SCN2A-213ENST00000636769 CLIP2Q9UDT6 1046 aa7.17□□□□□ -1.26
SCN2A-213ENST00000636769 GBP2P32456 591 aaPredicted RBP7.17□□□□□ -1.26
SCN2A-213ENST00000636769 SPECC1LQ69YQ0 1117 aa7.17□□□□□ -1.26
SCN2A-213ENST00000636769 TMX4Q9H1E5 349 aaPredicted RBP7.17□□□□□ -1.26
SCN2A-213ENST00000636769 CUX1P39880 1505 aa7.17□□□□□ -1.26
SCN2A-213ENST00000636769 KIF3BO15066 747 aa7.17□□□□□ -1.26
SCN2A-213ENST00000636769 URI1O94763 535 aaPredicted RBP7.17□□□□□ -1.26
SCN2A-213ENST00000636769 TAF4BQ92750 862 aa7.17□□□□□ -1.26
SCN2A-213ENST00000636769 CCDC150Q8NCX0 1101 aa7.16□□□□□ -1.26
SCN2A-213ENST00000636769 LMAN1P49257 510 aa7.16□□□□□ -1.26
SCN2A-213ENST00000636769 SPATA24Q86W54 205 aa7.16□□□□□ -1.26
SCN2A-213ENST00000636769 TBC1D2Q9BYX2 928 aa7.16□□□□□ -1.26
SCN2A-213ENST00000636769 KIF21BO75037 1637 aa7.16□□□□□ -1.26
SCN2A-213ENST00000636769 TEFQ10587 303 aa7.16□□□□□ -1.26
SCN2A-213ENST00000636769 NCBP3Q53F19 620 aaKnown RBP7.16□□□□□ -1.26
SCN2A-213ENST00000636769 FSD1Q9BTV5 496 aa7.16□□□□□ -1.26
SCN2A-213ENST00000636769 RRBP1Q9P2E9 1410 aaKnown RBP7.16□□□□□ -1.26
SCN2A-213ENST00000636769 MAP2K1Q02750 393 aaPredicted RBP7.16□□□□□ -1.26
SCN2A-213ENST00000636769 TCP11L2Q8N4U5 519 aa7.16□□□□□ -1.26
SCN2A-213ENST00000636769 SH2B1Q9NRF2 756 aaPredicted RBP7.16□□□□□ -1.26
SCN2A-213ENST00000636769 FAM193AP78312 1265 aa7.16□□□□□ -1.26
SCN2A-213ENST00000636769 CDKL5O76039 1030 aa7.16□□□□□ -1.26
SCN2A-213ENST00000636769 NOLC1Q14978 699 aaKnown RBP eCLIP7.16□□□□□ -1.26
SCN2A-213ENST00000636769 ATF7IPQ6VMQ6 1270 aa7.16□□□□□ -1.26
SCN2A-213ENST00000636769 LRRFIP2Q9Y608 721 aaKnown RBP7.16□□□□□ -1.26
SCN2A-213ENST00000636769 MYOM3Q5VTT5 1437 aa7.16□□□□□ -1.26
SCN2A-213ENST00000636769 VGFO15240 615 aaPredicted RBP7.15□□□□□ -1.26
SCN2A-213ENST00000636769 CCDC175P0C221 793 aa7.15□□□□□ -1.26
SCN2A-213ENST00000636769 ZNF397Q8NF99 534 aaPredicted RBP7.15□□□□□ -1.26
SCN2A-213ENST00000636769 TDO2P48775 406 aa7.15□□□□□ -1.26
SCN2A-213ENST00000636769 RPAP2Q8IXW5 612 aaPredicted RBP7.15□□□□□ -1.26
SCN2A-213ENST00000636769 PPP2R1AP30153 589 aa7.15□□□□□ -1.26
SCN2A-213ENST00000636769 CFAP100Q494V2 611 aa7.15□□□□□ -1.26
SCN2A-213ENST00000636769 LRSAM1Q6UWE0 723 aa7.15□□□□□ -1.26
SCN2A-213ENST00000636769 FGD6Q6ZV73 1430 aa7.15□□□□□ -1.26
SCN2A-213ENST00000636769 TRHP20396 242 aaPredicted RBP7.15□□□□□ -1.26
SCN2A-213ENST00000636769 HSPA4P34932 840 aa7.15□□□□□ -1.26
SCN2A-213ENST00000636769 TTC31Q49AM3 519 aaPredicted RBP7.15□□□□□ -1.26
SCN2A-213ENST00000636769 CEP135Q66GS9 1140 aa7.15□□□□□ -1.26
SCN2A-213ENST00000636769 KIF4BQ2VIQ3 1234 aa7.15□□□□□ -1.27
SCN2A-213ENST00000636769 ARFGAP3Q9NP61 516 aa7.15□□□□□ -1.27
SCN2A-213ENST00000636769 FGD5Q6ZNL6 1462 aa7.15□□□□□ -1.27
SCN2A-213ENST00000636769 CLGNO14967 610 aa7.15□□□□□ -1.27
SCN2A-213ENST00000636769 TAX1BP1Q86VP1 789 aa7.15□□□□□ -1.27
SCN2A-213ENST00000636769 C16orf45Q96MC5 204 aaPredicted RBP7.15□□□□□ -1.27
SCN2A-213ENST00000636769 NAA15Q9BXJ9 866 aaKnown RBP7.15□□□□□ -1.27
SCN2A-213ENST00000636769 POLA1P09884 1462 aaPredicted RBP7.15□□□□□ -1.27
SCN2A-213ENST00000636769 PRXQ9BXM0 1461 aa7.15□□□□□ -1.27
SCN2A-213ENST00000636769 CCT4P50991 539 aaKnown RBP7.15□□□□□ -1.27
SCN2A-213ENST00000636769 SNW1Q13573 536 aaKnown RBP7.15□□□□□ -1.27
SCN2A-213ENST00000636769 FAM177A1Q8N128 213 aaPredicted RBP7.15□□□□□ -1.27
SCN2A-213ENST00000636769 GCOM1H8Y6P7 765 aaPredicted RBP7.14□□□□□ -1.27
SCN2A-213ENST00000636769 MYZAPP0CAP1 466 aa7.14□□□□□ -1.27
SCN2A-213ENST00000636769 USP25Q9UHP3 1055 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms