RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 SULT6B1Q6IMI4 303 aa17.53■□□□□ 0.4
CACNA1A-228ENST00000636610 IL13P35225 146 aa17.53■□□□□ 0.4
CACNA1A-228ENST00000636610 GNAI1P63096 354 aa17.53■□□□□ 0.4
CACNA1A-228ENST00000636610 NUDT16Q96DE0 195 aaKnown RBP17.53■□□□□ 0.4
CACNA1A-228ENST00000636610 ADGRB2O60241 1585 aa17.52■□□□□ 0.4
CACNA1A-228ENST00000636610 LRRC7Q96NW7 1537 aa17.52■□□□□ 0.39
CACNA1A-228ENST00000636610 TNPO1Q92973 898 aaKnown RBP17.52■□□□□ 0.39
CACNA1A-228ENST00000636610 NECTIN2Q92692 538 aa17.51■□□□□ 0.39
CACNA1A-228ENST00000636610 SLC4A10Q6U841 1118 aa17.5■□□□□ 0.39
CACNA1A-228ENST00000636610 DIP2CQ9Y2E4 1556 aa17.5■□□□□ 0.39
CACNA1A-228ENST00000636610 WASLO00401 505 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-228ENST00000636610 PLEKHG5O94827 1062 aa17.5■□□□□ 0.39
CACNA1A-228ENST00000636610 L1TD1Q5T7N2 865 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-228ENST00000636610 PNPLA6Q8IY17 1366 aa17.49■□□□□ 0.39
CACNA1A-228ENST00000636610 KIF2CQ99661 725 aa17.49■□□□□ 0.39
CACNA1A-228ENST00000636610 BMP2KLQ5H9B9 411 aa17.48■□□□□ 0.39
CACNA1A-228ENST00000636610 USP32Q8NFA0 1604 aa17.48■□□□□ 0.39
CACNA1A-228ENST00000636610 ZNF692Q9BU19 519 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-228ENST00000636610 FOXO3O43524 673 aa17.47■□□□□ 0.39
CACNA1A-228ENST00000636610 HSP90AB2PQ58FF8 381 aa17.47■□□□□ 0.39
CACNA1A-228ENST00000636610 GSPT1P15170 499 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-228ENST00000636610 FOXD4L5Q5VV16 416 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-228ENST00000636610 TSHZ3Q63HK5 1081 aa17.47■□□□□ 0.39
CACNA1A-228ENST00000636610 GAS2L2Q8NHY3 880 aa17.47■□□□□ 0.39
CACNA1A-228ENST00000636610 FOXD4L4Q8WXT5 416 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-228ENST00000636610 ESF1Q9H501 851 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-228ENST00000636610 IFT57Q9NWB7 429 aa17.47■□□□□ 0.39
CACNA1A-228ENST00000636610 F6X3S4 739 aa17.47■□□□□ 0.39
CACNA1A-228ENST00000636610 SSFA2P28290 1259 aa17.47■□□□□ 0.39
CACNA1A-228ENST00000636610 FAM43AQ8N2R8 423 aa17.47■□□□□ 0.39
CACNA1A-228ENST00000636610 CFAP44Q96MT7 982 aa17.47■□□□□ 0.39
CACNA1A-228ENST00000636610 METP08581 1390 aa17.47■□□□□ 0.39
CACNA1A-228ENST00000636610 FAM135BQ49AJ0 1406 aa17.46■□□□□ 0.39
CACNA1A-228ENST00000636610 RBM25P49756 843 aaKnown RBP17.46■□□□□ 0.39
CACNA1A-228ENST00000636610 ARHGEF40Q8TER5 1519 aa17.46■□□□□ 0.39
CACNA1A-228ENST00000636610 GCC1Q96CN9 775 aa17.45■□□□□ 0.38
CACNA1A-228ENST00000636610 CHAMP1Q96JM3 812 aa17.45■□□□□ 0.38
CACNA1A-228ENST00000636610 ALKQ9UM73 1620 aa17.45■□□□□ 0.38
CACNA1A-228ENST00000636610 NCLP19338 710 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-228ENST00000636610 NCBP3Q53F19 620 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-228ENST00000636610 NUTM2GQ5VZR2 741 aa17.44■□□□□ 0.38
CACNA1A-228ENST00000636610 MEIS3Q99687 375 aa17.44■□□□□ 0.38
CACNA1A-228ENST00000636610 CALD1Q05682 793 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-228ENST00000636610 GAS2L3Q86XJ1 694 aa17.44■□□□□ 0.38
CACNA1A-228ENST00000636610 CCDC61Q9Y6R9 512 aa17.44■□□□□ 0.38
CACNA1A-228ENST00000636610 EIF4A2Q14240 407 aaKnown RBP17.43■□□□□ 0.38
CACNA1A-228ENST00000636610 PLEKHM2Q8IWE5 1019 aa17.43■□□□□ 0.38
CACNA1A-228ENST00000636610 NOL8Q76FK4 1167 aaKnown RBP17.43■□□□□ 0.38
CACNA1A-228ENST00000636610 ZNF853P0CG23 659 aa17.42■□□□□ 0.38
CACNA1A-228ENST00000636610 SLC26A8Q96RN1 970 aa17.42■□□□□ 0.38
CACNA1A-228ENST00000636610 SLC4A2P04920 1241 aa17.42■□□□□ 0.38
CACNA1A-228ENST00000636610 ARHGAP31Q2M1Z3 1444 aa17.42■□□□□ 0.38
CACNA1A-228ENST00000636610 RIMS2Q9UQ26 1411 aa17.42■□□□□ 0.38
CACNA1A-228ENST00000636610 API5Q9BZZ5 524 aaKnown RBP17.42■□□□□ 0.38
CACNA1A-228ENST00000636610 TMEM131LA2VDJ0 1609 aa17.42■□□□□ 0.38
CACNA1A-228ENST00000636610 K7ELQ4 463 aaPredicted RBP17.41■□□□□ 0.38
CACNA1A-228ENST00000636610 ABCC4O15439 1325 aa17.41■□□□□ 0.38
CACNA1A-228ENST00000636610 ZFYVE9O95405 1425 aa17.41■□□□□ 0.38
CACNA1A-228ENST00000636610 PKP1Q13835 747 aa17.41■□□□□ 0.38
CACNA1A-228ENST00000636610 TPRNQ4KMQ1 711 aa17.41■□□□□ 0.38
CACNA1A-228ENST00000636610 PRR36Q9H6K5 1346 aa17.41■□□□□ 0.38
CACNA1A-228ENST00000636610 MAP2P11137 1827 aaKnown RBP17.41■□□□□ 0.38
CACNA1A-228ENST00000636610 NEO1Q92859 1461 aa17.41■□□□□ 0.38
CACNA1A-228ENST00000636610 ZMYM3Q14202 1370 aa17.41■□□□□ 0.38
CACNA1A-228ENST00000636610 CDC45O75419 566 aa17.41■□□□□ 0.38
CACNA1A-228ENST00000636610 GRPEL1Q9HAV7 217 aa17.41■□□□□ 0.38
CACNA1A-228ENST00000636610 G2E3Q7L622 706 aa17.4■□□□□ 0.38
CACNA1A-228ENST00000636610 FSD2A1L4K1 749 aa17.4■□□□□ 0.38
CACNA1A-228ENST00000636610 DDX11L8A8MPP1 907 aa17.4■□□□□ 0.38
CACNA1A-228ENST00000636610 NAP1L5Q96NT1 182 aaPredicted RBP17.39■□□□□ 0.38
CACNA1A-228ENST00000636610 ARHGAP45Q92619 1136 aa17.39■□□□□ 0.37
CACNA1A-228ENST00000636610 FOXD4L6Q3SYB3 417 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-228ENST00000636610 FOXD4L3Q6VB84 417 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-228ENST00000636610 LTV1Q96GA3 475 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-228ENST00000636610 GBP4Q96PP9 640 aa17.38■□□□□ 0.37
CACNA1A-228ENST00000636610 SNX21Q969T3 373 aa17.38■□□□□ 0.37
CACNA1A-228ENST00000636610 EXOC6BQ9Y2D4 811 aa17.38■□□□□ 0.37
CACNA1A-228ENST00000636610 CPS1P31327 1500 aa17.38■□□□□ 0.37
CACNA1A-228ENST00000636610 CFAP74Q9C0B2 1584 aa17.37■□□□□ 0.37
CACNA1A-228ENST00000636610 LMOD3Q0VAK6 560 aa17.37■□□□□ 0.37
CACNA1A-228ENST00000636610 PREX1Q8TCU6 1659 aa17.37■□□□□ 0.37
CACNA1A-228ENST00000636610 ZNF428Q96B54 188 aa17.37■□□□□ 0.37
CACNA1A-228ENST00000636610 ACEP12821 1306 aa17.37■□□□□ 0.37
CACNA1A-228ENST00000636610 SDSP20132 328 aa17.37■□□□□ 0.37
CACNA1A-228ENST00000636610 RAB3GAP1Q15042 981 aa17.37■□□□□ 0.37
CACNA1A-228ENST00000636610 MCTP1Q6DN14 999 aa17.37■□□□□ 0.37
CACNA1A-228ENST00000636610 DDIT3P35638 169 aa17.36■□□□□ 0.37
CACNA1A-228ENST00000636610 CEBPAP49715 358 aaPredicted RBP17.36■□□□□ 0.37
CACNA1A-228ENST00000636610 DCTPP1Q9H773 170 aa17.36■□□□□ 0.37
CACNA1A-228ENST00000636610 DDX49Q9Y6V7 483 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-228ENST00000636610 AK9Q5TCS8 1911 aa17.36■□□□□ 0.37
CACNA1A-228ENST00000636610 MSH6P52701 1360 aa17.36■□□□□ 0.37
CACNA1A-228ENST00000636610 ZGPATQ8N5A5 531 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-228ENST00000636610 CHMP4BQ9H444 224 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-228ENST00000636610 TSPOAP1O95153 1857 aa17.35■□□□□ 0.37
CACNA1A-228ENST00000636610 TTC22Q5TAA0 569 aa17.35■□□□□ 0.37
CACNA1A-228ENST00000636610 CEP85Q6P2H3 762 aa17.35■□□□□ 0.37
CACNA1A-228ENST00000636610 MRE11P49959 708 aa17.35■□□□□ 0.37
CACNA1A-228ENST00000636610 MED14O60244 1454 aa17.35■□□□□ 0.37
CACNA1A-228ENST00000636610 BRPF1P55201 1214 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms