RNA–Protein interactions for RNA: ENST00000636475.1

PCCA-213, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-213ENST00000636475 SSH1Q8WYL5 1049 aa12.76□□□□□ -0.37
PCCA-213ENST00000636475 PRR36Q9H6K5 1346 aa12.75□□□□□ -0.37
PCCA-213ENST00000636475 SETD1BQ9UPS6 1966 aaKnown RBP12.75□□□□□ -0.37
PCCA-213ENST00000636475 EMILIN1Q9Y6C2 1016 aa12.75□□□□□ -0.37
PCCA-213ENST00000636475 PCDHB15Q9Y5E8 787 aa12.74□□□□□ -0.37
PCCA-213ENST00000636475 TRIM27P14373 513 aa12.74□□□□□ -0.37
PCCA-213ENST00000636475 GNAI1P63096 354 aa12.74□□□□□ -0.37
PCCA-213ENST00000636475 IFT57Q9NWB7 429 aa12.74□□□□□ -0.37
PCCA-213ENST00000636475 OVOS2A0A0J9YW53 1432 aa12.74□□□□□ -0.37
PCCA-213ENST00000636475 OVOS2Q6IE36 1432 aa12.74□□□□□ -0.37
PCCA-213ENST00000636475 LTKP29376 864 aa12.73□□□□□ -0.37
PCCA-213ENST00000636475 USP6P35125 1406 aa12.73□□□□□ -0.37
PCCA-213ENST00000636475 HSPA2P54652 639 aa12.73□□□□□ -0.37
PCCA-213ENST00000636475 CHMP4BQ9H444 224 aaKnown RBP12.73□□□□□ -0.37
PCCA-213ENST00000636475 TNNQ9UQP3 1299 aa12.73□□□□□ -0.37
PCCA-213ENST00000636475 TBX22Q9Y458 520 aa12.73□□□□□ -0.37
PCCA-213ENST00000636475 HDAC1Q13547 482 aaPredicted RBP12.72□□□□□ -0.37
PCCA-213ENST00000636475 TTC21BQ7Z4L5 1316 aa12.72□□□□□ -0.37
PCCA-213ENST00000636475 CERKQ8TCT0 537 aa12.72□□□□□ -0.37
PCCA-213ENST00000636475 NOB1Q9ULX3 412 aaKnown RBP12.72□□□□□ -0.37
PCCA-213ENST00000636475 PTPRUQ92729 1446 aa12.71□□□□□ -0.37
PCCA-213ENST00000636475 HMOX1P09601 288 aa12.71□□□□□ -0.37
PCCA-213ENST00000636475 RTL5Q5HYW3 569 aaPredicted RBP12.71□□□□□ -0.37
PCCA-213ENST00000636475 ARHGAP45Q92619 1136 aa12.71□□□□□ -0.37
PCCA-213ENST00000636475 PHACTR3Q96KR7 559 aa12.71□□□□□ -0.37
PCCA-213ENST00000636475 USP35Q9P2H5 1018 aa12.71□□□□□ -0.37
PCCA-213ENST00000636475 DAXXQ9UER7 740 aaPredicted RBP12.71□□□□□ -0.37
PCCA-213ENST00000636475 ACEP12821 1306 aa12.71□□□□□ -0.37
PCCA-213ENST00000636475 TTC21AQ8NDW8 1320 aa12.71□□□□□ -0.37
PCCA-213ENST00000636475 USP31Q70CQ4 1352 aa12.71□□□□□ -0.37
PCCA-213ENST00000636475 RGPD1P0DJD0 1748 aa12.71□□□□□ -0.38
PCCA-213ENST00000636475 XRN1Q8IZH2 1706 aaKnown RBP12.71□□□□□ -0.38
PCCA-213ENST00000636475 ZNF853P0CG23 659 aa12.7□□□□□ -0.38
PCCA-213ENST00000636475 FBLN1P23142 703 aa12.7□□□□□ -0.38
PCCA-213ENST00000636475 THEMISQ8N1K5 641 aaPredicted RBP12.7□□□□□ -0.38
PCCA-213ENST00000636475 ZRANB1Q9UGI0 708 aa12.7□□□□□ -0.38
PCCA-213ENST00000636475 NCKAP5LQ9HCH0 1330 aa12.7□□□□□ -0.38
PCCA-213ENST00000636475 SSH2Q76I76 1423 aa12.7□□□□□ -0.38
PCCA-213ENST00000636475 ITPRIPQ8IWB1 547 aa12.7□□□□□ -0.38
PCCA-213ENST00000636475 PDZRN3Q9UPQ7 1066 aa12.7□□□□□ -0.38
PCCA-213ENST00000636475 FMN2Q9NZ56 1722 aa12.7□□□□□ -0.38
PCCA-213ENST00000636475 CFAP44Q96MT7 982 aa12.69□□□□□ -0.38
PCCA-213ENST00000636475 HAP1P54257 671 aaPredicted RBP12.69□□□□□ -0.38
PCCA-213ENST00000636475 RRS1Q15050 365 aaKnown RBP12.69□□□□□ -0.38
PCCA-213ENST00000636475 PIK3R4Q99570 1358 aa12.68□□□□□ -0.38
PCCA-213ENST00000636475 VAMP4O75379 141 aa12.68□□□□□ -0.38
PCCA-213ENST00000636475 NBR1Q14596 966 aa12.68□□□□□ -0.38
PCCA-213ENST00000636475 AMOTL2Q9Y2J4 779 aa12.68□□□□□ -0.38
PCCA-213ENST00000636475 PEAK1Q9H792 1746 aa12.67□□□□□ -0.38
PCCA-213ENST00000636475 ANKARQ7Z5J8 1434 aa12.67□□□□□ -0.38
PCCA-213ENST00000636475 TMEM57Q8N5G2 664 aa12.67□□□□□ -0.38
PCCA-213ENST00000636475 ZBTB40Q9NUA8 1239 aa12.67□□□□□ -0.38
PCCA-213ENST00000636475 USP54Q70EL1 1684 aa12.67□□□□□ -0.38
PCCA-213ENST00000636475 CEBPAP49715 358 aaPredicted RBP12.67□□□□□ -0.38
PCCA-213ENST00000636475 BCL11AQ9H165 835 aa12.67□□□□□ -0.38
PCCA-213ENST00000636475 LAS1LQ9Y4W2 734 aaKnown RBP12.67□□□□□ -0.38
PCCA-213ENST00000636475 EIF4A2Q14240 407 aaKnown RBP12.66□□□□□ -0.38
PCCA-213ENST00000636475 SMC5Q8IY18 1101 aa12.66□□□□□ -0.38
PCCA-213ENST00000636475 MRPL50Q8N5N7 158 aaKnown RBP12.66□□□□□ -0.38
PCCA-213ENST00000636475 SLC26A8Q96RN1 970 aa12.66□□□□□ -0.38
PCCA-213ENST00000636475 UPF2Q9HAU5 1272 aaKnown RBP12.66□□□□□ -0.38
PCCA-213ENST00000636475 MBIPQ9NS73 344 aa12.66□□□□□ -0.38
PCCA-213ENST00000636475 RGPD8O14715 1765 aaPredicted RBP12.65□□□□□ -0.38
PCCA-213ENST00000636475 STRCQ7RTU9 1775 aa12.65□□□□□ -0.38
PCCA-213ENST00000636475 PLPPR3Q6T4P5 718 aa12.65□□□□□ -0.38
PCCA-213ENST00000636475 ARHGEF10O15013 1369 aa12.65□□□□□ -0.38
PCCA-213ENST00000636475 KIF24Q5T7B8 1368 aa12.65□□□□□ -0.38
PCCA-213ENST00000636475 CEP170BQ9Y4F5 1589 aaPredicted RBP12.65□□□□□ -0.38
PCCA-213ENST00000636475 TWISTNBQ3B726 338 aaPredicted RBP12.64□□□□□ -0.39
PCCA-213ENST00000636475 SBNO1A3KN83 1393 aa12.64□□□□□ -0.39
PCCA-213ENST00000636475 USP19O94966 1318 aa12.64□□□□□ -0.39
PCCA-213ENST00000636475 API5Q9BZZ5 524 aaKnown RBP12.63□□□□□ -0.39
PCCA-213ENST00000636475 FLT4P35916 1363 aa12.63□□□□□ -0.39
PCCA-213ENST00000636475 ABCC4O15439 1325 aa12.63□□□□□ -0.39
PCCA-213ENST00000636475 PIK3C2AO00443 1686 aa12.63□□□□□ -0.39
PCCA-213ENST00000636475 SULT6B1Q6IMI4 303 aa12.63□□□□□ -0.39
PCCA-213ENST00000636475 THUMPD2Q9BTF0 503 aaKnown RBP12.63□□□□□ -0.39
PCCA-213ENST00000636475 KIAA0232Q92628 1395 aa12.62□□□□□ -0.39
PCCA-213ENST00000636475 BECN1Q14457 450 aa12.62□□□□□ -0.39
PCCA-213ENST00000636475 ZNF142P52746 1687 aaPredicted RBP12.62□□□□□ -0.39
PCCA-213ENST00000636475 ZBTB7BO15156 539 aaPredicted RBP12.61□□□□□ -0.39
PCCA-213ENST00000636475 TSPYL6Q8N831 410 aa12.61□□□□□ -0.39
PCCA-213ENST00000636475 NGDNQ8NEJ9 315 aaKnown RBP12.61□□□□□ -0.39
PCCA-213ENST00000636475 GCC1Q96CN9 775 aa12.61□□□□□ -0.39
PCCA-213ENST00000636475 DEKP35659 375 aaKnown RBP12.6□□□□□ -0.39
PCCA-213ENST00000636475 CHD2O14647 1828 aaKnown RBP12.6□□□□□ -0.39
PCCA-213ENST00000636475 KDRP35968 1356 aa12.6□□□□□ -0.39
PCCA-213ENST00000636475 NUTM2FA1L443 756 aa12.6□□□□□ -0.39
PCCA-213ENST00000636475 CHL1O00533 1208 aa12.6□□□□□ -0.39
PCCA-213ENST00000636475 NUCB1Q02818 461 aa12.6□□□□□ -0.39
PCCA-213ENST00000636475 HSP90AB2PQ58FF8 381 aa12.6□□□□□ -0.39
PCCA-213ENST00000636475 AEBP1Q8IUX7 1158 aa12.6□□□□□ -0.39
PCCA-213ENST00000636475 FAM83GA6ND36 823 aa12.59□□□□□ -0.39
PCCA-213ENST00000636475 SEC24BO95487 1268 aa12.59□□□□□ -0.39
PCCA-213ENST00000636475 C8orf58Q8NAV2 365 aa12.59□□□□□ -0.39
PCCA-213ENST00000636475 TBC1D32Q96NH3 1257 aa12.59□□□□□ -0.39
PCCA-213ENST00000636475 MARF1Q9Y4F3 1742 aaKnown RBP12.59□□□□□ -0.39
PCCA-213ENST00000636475 MAP3K19Q56UN5 1328 aa12.59□□□□□ -0.39
PCCA-213ENST00000636475 IGSF1Q8N6C5 1336 aa12.57□□□□□ -0.4
PCCA-213ENST00000636475 CHD1LQ86WJ1 897 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms