RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 PKNOX2Q96KN3 472 aa17.56■□□□□ 0.4
NEDD4L-238ENST00000635997 BRPF3Q9ULD4 1205 aa17.56■□□□□ 0.4
NEDD4L-238ENST00000635997 NOB1Q9ULX3 412 aaKnown RBP17.56■□□□□ 0.4
NEDD4L-238ENST00000635997 STARD3NLO95772 234 aa17.55■□□□□ 0.4
NEDD4L-238ENST00000635997 MYL6BP14649 208 aa17.55■□□□□ 0.4
NEDD4L-238ENST00000635997 GBP4Q96PP9 640 aa17.55■□□□□ 0.4
NEDD4L-238ENST00000635997 MCM10Q7L590 875 aa17.55■□□□□ 0.4
NEDD4L-238ENST00000635997 ZRANB1Q9UGI0 708 aa17.55■□□□□ 0.4
NEDD4L-238ENST00000635997 ANKRD24Q8TF21 1146 aa17.54■□□□□ 0.4
NEDD4L-238ENST00000635997 ZNF219Q9P2Y4 722 aaPredicted RBP17.54■□□□□ 0.4
NEDD4L-238ENST00000635997 ST18O60284 1047 aa17.54■□□□□ 0.4
NEDD4L-238ENST00000635997 RAD21O60216 631 aa17.54■□□□□ 0.4
NEDD4L-238ENST00000635997 CLSTN1O94985 981 aa17.54■□□□□ 0.4
NEDD4L-238ENST00000635997 CCDC30Q5VVM6 783 aa17.53■□□□□ 0.4
NEDD4L-238ENST00000635997 KDM4FA0A1W2PPD8 638 aa17.53■□□□□ 0.4
NEDD4L-238ENST00000635997 HSPA1LP34931 641 aa17.53■□□□□ 0.4
NEDD4L-238ENST00000635997 CFAP43Q8NDM7 1665 aa17.52■□□□□ 0.4
NEDD4L-238ENST00000635997 RSPH6AQ9H0K4 717 aa17.52■□□□□ 0.4
NEDD4L-238ENST00000635997 GSE1Q14687 1217 aa17.52■□□□□ 0.39
NEDD4L-238ENST00000635997 ATP7AQ04656 1500 aa17.52■□□□□ 0.39
NEDD4L-238ENST00000635997 FBXO41Q8TF61 875 aa17.51■□□□□ 0.39
NEDD4L-238ENST00000635997 TRIM34Q9BYJ4 488 aa17.51■□□□□ 0.39
NEDD4L-238ENST00000635997 CWC22Q9HCG8 908 aaKnown RBP17.51■□□□□ 0.39
NEDD4L-238ENST00000635997 RFC4P35249 363 aa17.5■□□□□ 0.39
NEDD4L-238ENST00000635997 TMPOP42166 694 aaKnown RBP17.5■□□□□ 0.39
NEDD4L-238ENST00000635997 DRC7Q8IY82 874 aa17.5■□□□□ 0.39
NEDD4L-238ENST00000635997 NOL10Q9BSC4 688 aaKnown RBP17.5■□□□□ 0.39
NEDD4L-238ENST00000635997 CTTNBP2Q8WZ74 1663 aa17.5■□□□□ 0.39
NEDD4L-238ENST00000635997 GCP02774 474 aa17.5■□□□□ 0.39
NEDD4L-238ENST00000635997 C16orf71Q8IYS4 520 aaPredicted RBP17.49■□□□□ 0.39
NEDD4L-238ENST00000635997 CCDC85AQ96PX6 553 aaPredicted RBP17.49■□□□□ 0.39
NEDD4L-238ENST00000635997 MAGI3Q5TCQ9 1506 aa17.49■□□□□ 0.39
NEDD4L-238ENST00000635997 WWC1Q8IX03 1113 aa17.49■□□□□ 0.39
NEDD4L-238ENST00000635997 ZCRB1Q8TBF4 217 aaKnown RBP17.48■□□□□ 0.39
NEDD4L-238ENST00000635997 SIL1Q9H173 461 aa17.48■□□□□ 0.39
NEDD4L-238ENST00000635997 GPR162Q16538 588 aa17.47■□□□□ 0.39
NEDD4L-238ENST00000635997 ZNF652Q9Y2D9 606 aa17.47■□□□□ 0.39
NEDD4L-238ENST00000635997 FCHSD2O94868 740 aa17.46■□□□□ 0.39
NEDD4L-238ENST00000635997 IL2RBP14784 551 aa17.46■□□□□ 0.39
NEDD4L-238ENST00000635997 HSP90AA2PQ14568 343 aaPredicted RBP17.46■□□□□ 0.39
NEDD4L-238ENST00000635997 RASSF8Q8NHQ8 419 aa17.46■□□□□ 0.39
NEDD4L-238ENST00000635997 NCBP3Q53F19 620 aaKnown RBP17.46■□□□□ 0.38
NEDD4L-238ENST00000635997 FYB1O15117 783 aa17.45■□□□□ 0.38
NEDD4L-238ENST00000635997 WASHC4Q2M389 1173 aa17.45■□□□□ 0.38
NEDD4L-238ENST00000635997 CLASRPQ8N2M8 674 aaKnown RBP17.45■□□□□ 0.38
NEDD4L-238ENST00000635997 SMARCC1Q92922 1105 aaPredicted RBP17.45■□□□□ 0.38
NEDD4L-238ENST00000635997 REC8O95072 547 aa17.45■□□□□ 0.38
NEDD4L-238ENST00000635997 PDZRN3Q9UPQ7 1066 aa17.45■□□□□ 0.38
NEDD4L-238ENST00000635997 GNAI3P08754 354 aa17.45■□□□□ 0.38
NEDD4L-238ENST00000635997 ZKSCAN1P17029 563 aaPredicted RBP17.45■□□□□ 0.38
NEDD4L-238ENST00000635997 MCTP1Q6DN14 999 aa17.45■□□□□ 0.38
NEDD4L-238ENST00000635997 SKAP1Q86WV1 359 aa17.45■□□□□ 0.38
NEDD4L-238ENST00000635997 AMOTQ4VCS5 1084 aa17.44■□□□□ 0.38
NEDD4L-238ENST00000635997 CREBRFQ8IUR6 639 aa17.44■□□□□ 0.38
NEDD4L-238ENST00000635997 IFNL2Q8IZJ0 200 aa17.44■□□□□ 0.38
NEDD4L-238ENST00000635997 SF3A1Q15459 793 aaKnown RBP17.44■□□□□ 0.38
NEDD4L-238ENST00000635997 SAMD1Q6SPF0 538 aaPredicted RBP17.44■□□□□ 0.38
NEDD4L-238ENST00000635997 ZNF622Q969S3 477 aaKnown RBP eCLIP17.44■□□□□ 0.38
NEDD4L-238ENST00000635997 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.44■□□□□ 0.38
NEDD4L-238ENST00000635997 BTBD11A6QL63 1104 aa17.44■□□□□ 0.38
NEDD4L-238ENST00000635997 NFE2L2Q16236 605 aa17.44■□□□□ 0.38
NEDD4L-238ENST00000635997 ATF7IPQ6VMQ6 1270 aa17.44■□□□□ 0.38
NEDD4L-238ENST00000635997 FAM184AQ8NB25 1140 aa17.44■□□□□ 0.38
NEDD4L-238ENST00000635997 RUFY2Q8WXA3 655 aa17.44■□□□□ 0.38
NEDD4L-238ENST00000635997 CDCA7Q9BWT1 371 aaPredicted RBP17.43■□□□□ 0.38
NEDD4L-238ENST00000635997 UBE2Q2Q8WVN8 375 aa17.43■□□□□ 0.38
NEDD4L-238ENST00000635997 FOSBP53539 338 aa17.43■□□□□ 0.38
NEDD4L-238ENST00000635997 VPS53Q5VIR6 699 aa17.42■□□□□ 0.38
NEDD4L-238ENST00000635997 H3BQV1 296 aa17.41■□□□□ 0.38
NEDD4L-238ENST00000635997 IFFO2Q5TF58 517 aa17.41■□□□□ 0.38
NEDD4L-238ENST00000635997 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.41■□□□□ 0.38
NEDD4L-238ENST00000635997 TTC21BQ7Z4L5 1316 aa17.41■□□□□ 0.38
NEDD4L-238ENST00000635997 CCDC27Q2M243 656 aa17.41■□□□□ 0.38
NEDD4L-238ENST00000635997 WDR63Q8IWG1 891 aa17.41■□□□□ 0.38
NEDD4L-238ENST00000635997 MTMR7Q9Y216 660 aa17.41■□□□□ 0.38
NEDD4L-238ENST00000635997 DNAJC2Q99543 621 aaKnown RBP17.41■□□□□ 0.38
NEDD4L-238ENST00000635997 HSP90AB4PQ58FF6 505 aa17.41■□□□□ 0.38
NEDD4L-238ENST00000635997 RPRD2Q5VT52 1461 aaKnown RBP17.4■□□□□ 0.38
NEDD4L-238ENST00000635997 ARHGEF10O15013 1369 aa17.4■□□□□ 0.38
NEDD4L-238ENST00000635997 C20orf194Q5TEA3 1177 aa17.4■□□□□ 0.38
NEDD4L-238ENST00000635997 SRCIN1Q9C0H9 1055 aa17.4■□□□□ 0.38
NEDD4L-238ENST00000635997 KDM4AO75164 1064 aa17.4■□□□□ 0.38
NEDD4L-238ENST00000635997 IL1RAPL2Q9NP60 686 aa17.4■□□□□ 0.38
NEDD4L-238ENST00000635997 CFAP74Q9C0B2 1584 aa17.4■□□□□ 0.38
NEDD4L-238ENST00000635997 AFF2P51816 1311 aa17.4■□□□□ 0.38
NEDD4L-238ENST00000635997 FAM83GA6ND36 823 aa17.39■□□□□ 0.38
NEDD4L-238ENST00000635997 CTDP1Q9Y5B0 961 aaPredicted RBP17.39■□□□□ 0.38
NEDD4L-238ENST00000635997 TTC21AQ8NDW8 1320 aa17.39■□□□□ 0.37
NEDD4L-238ENST00000635997 GNAI2P04899 355 aa17.39■□□□□ 0.37
NEDD4L-238ENST00000635997 ATP6V1AP38606 617 aa17.39■□□□□ 0.37
NEDD4L-238ENST00000635997 PDE3AQ14432 1141 aa17.39■□□□□ 0.37
NEDD4L-238ENST00000635997 KRT27Q7Z3Y8 459 aa17.39■□□□□ 0.37
NEDD4L-238ENST00000635997 GRM1Q13255 1194 aa17.39■□□□□ 0.37
NEDD4L-238ENST00000635997 ARID3AQ99856 593 aa17.39■□□□□ 0.37
NEDD4L-238ENST00000635997 FSD1Q9BTV5 496 aa17.39■□□□□ 0.37
NEDD4L-238ENST00000635997 C22orf23Q9BZE7 217 aa17.39■□□□□ 0.37
NEDD4L-238ENST00000635997 CLASP1Q7Z460 1538 aa17.38■□□□□ 0.37
NEDD4L-238ENST00000635997 SLFN5Q08AF3 891 aa17.38■□□□□ 0.37
NEDD4L-238ENST00000635997 HSP90AB2PQ58FF8 381 aa17.38■□□□□ 0.37
NEDD4L-238ENST00000635997 MLH3Q9UHC1 1453 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms