RNA–Protein interactions for RNA: ENST00000635915.1

CLN5-206, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 2,517 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-206ENST00000635915 PHF8Q9UPP1 1060 aa23.24■■□□□ 1.31
CLN5-206ENST00000635915 ADGRL3Q9HAR2 1447 aa23.24■■□□□ 1.31
CLN5-206ENST00000635915 SULT6B1Q6IMI4 303 aa23.23■■□□□ 1.31
CLN5-206ENST00000635915 TNNQ9UQP3 1299 aa23.23■■□□□ 1.31
CLN5-206ENST00000635915 LAS1LQ9Y4W2 734 aaKnown RBP23.22■■□□□ 1.31
CLN5-206ENST00000635915 IL16Q14005 1332 aa23.22■■□□□ 1.31
CLN5-206ENST00000635915 ESCO1Q5FWF5 840 aa23.21■■□□□ 1.31
CLN5-206ENST00000635915 ABTB2Q8N961 1025 aa23.21■■□□□ 1.31
CLN5-206ENST00000635915 SKAP1Q86WV1 359 aa23.21■■□□□ 1.31
CLN5-206ENST00000635915 COG6Q9Y2V7 657 aa23.2■■□□□ 1.3
CLN5-206ENST00000635915 FAM83GA6ND36 823 aa23.19■■□□□ 1.3
CLN5-206ENST00000635915 PDE3AQ14432 1141 aa23.19■■□□□ 1.3
CLN5-206ENST00000635915 DLG5Q8TDM6 1919 aa23.18■■□□□ 1.3
CLN5-206ENST00000635915 RLBP1P12271 317 aa23.18■■□□□ 1.3
CLN5-206ENST00000635915 AMPHP49418 695 aa23.18■■□□□ 1.3
CLN5-206ENST00000635915 CLUAP1Q96AJ1 413 aa23.17■■□□□ 1.3
CLN5-206ENST00000635915 DCTN1Q14203 1278 aa23.17■■□□□ 1.3
CLN5-206ENST00000635915 PROSER2Q86WR7 435 aaPredicted RBP23.17■■□□□ 1.3
CLN5-206ENST00000635915 SBNO1A3KN83 1393 aa23.16■■□□□ 1.3
CLN5-206ENST00000635915 MARF1Q9Y4F3 1742 aaKnown RBP23.16■■□□□ 1.3
CLN5-206ENST00000635915 ORAI2Q96SN7 254 aa23.16■■□□□ 1.3
CLN5-206ENST00000635915 FLT4P35916 1363 aa23.16■■□□□ 1.3
CLN5-206ENST00000635915 SSH1Q8WYL5 1049 aa23.15■■□□□ 1.3
CLN5-206ENST00000635915 SMC4Q9NTJ3 1288 aa23.15■■□□□ 1.3
CLN5-206ENST00000635915 HSPA2P54652 639 aa23.14■■□□□ 1.3
CLN5-206ENST00000635915 XPCQ01831 940 aaPredicted RBP23.14■■□□□ 1.3
CLN5-206ENST00000635915 PSME1Q06323 249 aa23.14■■□□□ 1.3
CLN5-206ENST00000635915 KDM2BQ8NHM5 1336 aa23.14■■□□□ 1.29
CLN5-206ENST00000635915 RGPD1P0DJD0 1748 aa23.13■■□□□ 1.29
CLN5-206ENST00000635915 CT47B1P0C2W7 299 aaPredicted RBP23.13■■□□□ 1.29
CLN5-206ENST00000635915 NWD1Q149M9 1564 aa23.12■■□□□ 1.29
CLN5-206ENST00000635915 FOXO3O43524 673 aa23.12■■□□□ 1.29
CLN5-206ENST00000635915 PLEKHG5O94827 1062 aa23.11■■□□□ 1.29
CLN5-206ENST00000635915 EYA1Q99502 592 aa23.1■■□□□ 1.29
CLN5-206ENST00000635915 MBIPQ9NS73 344 aa23.1■■□□□ 1.29
CLN5-206ENST00000635915 HOXC9P31274 260 aa23.09■■□□□ 1.29
CLN5-206ENST00000635915 LMOD3Q0VAK6 560 aa23.09■■□□□ 1.29
CLN5-206ENST00000635915 LTV1Q96GA3 475 aaPredicted RBP23.09■■□□□ 1.29
CLN5-206ENST00000635915 ELL2O00472 640 aaPredicted RBP23.08■■□□□ 1.29
CLN5-206ENST00000635915 CALD1Q05682 793 aaKnown RBP23.08■■□□□ 1.29
CLN5-206ENST00000635915 CENPQQ7L2Z9 268 aaPredicted RBP23.08■■□□□ 1.29
CLN5-206ENST00000635915 TSPYL6Q8N831 410 aa23.08■■□□□ 1.29
CLN5-206ENST00000635915 IFT57Q9NWB7 429 aa23.08■■□□□ 1.29
CLN5-206ENST00000635915 ZNF853P0CG23 659 aa23.08■■□□□ 1.28
CLN5-206ENST00000635915 GNAI1P63096 354 aa23.08■■□□□ 1.28
CLN5-206ENST00000635915 ZKSCAN2Q63HK3 967 aa23.08■■□□□ 1.28
CLN5-206ENST00000635915 ARHGEF10O15013 1369 aa23.07■■□□□ 1.28
CLN5-206ENST00000635915 MCM10Q7L590 875 aa23.07■■□□□ 1.28
CLN5-206ENST00000635915 NOB1Q9ULX3 412 aaKnown RBP23.06■■□□□ 1.28
CLN5-206ENST00000635915 IGHDP01880 384 aa23.05■■□□□ 1.28
CLN5-206ENST00000635915 TRIM27P14373 513 aa23.05■■□□□ 1.28
CLN5-206ENST00000635915 CFAP44Q96MT7 982 aa23.05■■□□□ 1.28
CLN5-206ENST00000635915 USP54Q70EL1 1684 aa23.05■■□□□ 1.28
CLN5-206ENST00000635915 IGSF1Q8N6C5 1336 aa23.05■■□□□ 1.28
CLN5-206ENST00000635915 ZBTB7CA1YPR0 619 aa23.05■■□□□ 1.28
CLN5-206ENST00000635915 FTSJ3Q8IY81 847 aaKnown RBP23.04■■□□□ 1.28
CLN5-206ENST00000635915 LMOD2Q6P5Q4 547 aa23.04■■□□□ 1.28
CLN5-206ENST00000635915 DZIP1LQ8IYY4 767 aaKnown RBP23.04■■□□□ 1.28
CLN5-206ENST00000635915 C19orf44Q9H6X5 657 aa23.04■■□□□ 1.28
CLN5-206ENST00000635915 TCERG1O14776 1098 aaKnown RBP23.03■■□□□ 1.28
CLN5-206ENST00000635915 MTHFSDQ2M296 383 aaKnown RBP23.03■■□□□ 1.28
CLN5-206ENST00000635915 STRCP1A6NGW2 1772 aa23.03■■□□□ 1.28
CLN5-206ENST00000635915 KDRP35968 1356 aa23.02■■□□□ 1.28
CLN5-206ENST00000635915 TMEM94Q12767 1356 aa23.02■■□□□ 1.28
CLN5-206ENST00000635915 VAMP4O75379 141 aa23.02■■□□□ 1.28
CLN5-206ENST00000635915 C8orf58Q8NAV2 365 aa23.02■■□□□ 1.28
CLN5-206ENST00000635915 ATF7IPQ6VMQ6 1270 aa23.01■■□□□ 1.27
CLN5-206ENST00000635915 C1orf167Q5SNV9 1468 aa23.01■■□□□ 1.27
CLN5-206ENST00000635915 LTN1O94822 1766 aa23.01■■□□□ 1.27
CLN5-206ENST00000635915 MVPQ14764 893 aaKnown RBP23.01■■□□□ 1.27
CLN5-206ENST00000635915 USHBP1Q8N6Y0 703 aa23.01■■□□□ 1.27
CLN5-206ENST00000635915 PCDHB15Q9Y5E8 787 aa23■■□□□ 1.27
CLN5-206ENST00000635915 NFAT5O94916 1531 aa23■■□□□ 1.27
CLN5-206ENST00000635915 ALDH1L2Q3SY69 923 aa22.99■■□□□ 1.27
CLN5-206ENST00000635915 KDM4FA0A1W2PPD8 638 aa22.99■■□□□ 1.27
CLN5-206ENST00000635915 TWISTNBQ3B726 338 aaPredicted RBP22.99■■□□□ 1.27
CLN5-206ENST00000635915 KIF24Q5T7B8 1368 aa22.99■■□□□ 1.27
CLN5-206ENST00000635915 KRT24Q2M2I5 525 aa22.98■■□□□ 1.27
CLN5-206ENST00000635915 KRT28Q7Z3Y7 464 aa22.98■■□□□ 1.27
CLN5-206ENST00000635915 DDX17Q92841 729 aaKnown RBP22.98■■□□□ 1.27
CLN5-206ENST00000635915 KIF16BQ96L93 1317 aa22.97■■□□□ 1.27
CLN5-206ENST00000635915 ATF3P18847 181 aa22.97■■□□□ 1.27
CLN5-206ENST00000635915 ITPRIPQ8IWB1 547 aa22.97■■□□□ 1.27
CLN5-206ENST00000635915 IP6K1Q92551 441 aa22.96■■□□□ 1.27
CLN5-206ENST00000635915 MIS18AQ9NYP9 233 aa22.96■■□□□ 1.27
CLN5-206ENST00000635915 TMEM57Q8N5G2 664 aa22.96■■□□□ 1.27
CLN5-206ENST00000635915 GCP02774 474 aa22.95■■□□□ 1.26
CLN5-206ENST00000635915 RGS3P49796 1198 aa22.95■■□□□ 1.26
CLN5-206ENST00000635915 RTL1A6NKG5 1358 aa22.94■■□□□ 1.26
CLN5-206ENST00000635915 CHL1O00533 1208 aa22.94■■□□□ 1.26
CLN5-206ENST00000635915 MRPL50Q8N5N7 158 aaKnown RBP22.94■■□□□ 1.26
CLN5-206ENST00000635915 KCNH5Q8NCM2 988 aa22.94■■□□□ 1.26
CLN5-206ENST00000635915 MS4A1P11836 297 aa22.93■■□□□ 1.26
CLN5-206ENST00000635915 PDE4AP27815 886 aa22.93■■□□□ 1.26
CLN5-206ENST00000635915 ZNF428Q96B54 188 aa22.93■■□□□ 1.26
CLN5-206ENST00000635915 IPO8O15397 1037 aaKnown RBP22.93■■□□□ 1.26
CLN5-206ENST00000635915 RTF1Q92541 710 aaKnown RBP22.92■■□□□ 1.26
CLN5-206ENST00000635915 CRB1P82279 1406 aa22.92■■□□□ 1.26
CLN5-206ENST00000635915 MST1RQ04912 1400 aa22.92■■□□□ 1.26
CLN5-206ENST00000635915 NBPF6Q5VWK0 638 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms