RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 MAPK8IP3Q9UPT6 1336 aa13.15□□□□□ -0.3
CACNA1A-216ENST00000635742 PRKAR2BP31323 418 aa13.15□□□□□ -0.3
CACNA1A-216ENST00000635742 PXDNQ92626 1479 aa13.15□□□□□ -0.31
CACNA1A-216ENST00000635742 FCHSD2O94868 740 aa13.14□□□□□ -0.31
CACNA1A-216ENST00000635742 SLFN5Q08AF3 891 aa13.14□□□□□ -0.31
CACNA1A-216ENST00000635742 DUSP27Q5VZP5 1158 aa13.14□□□□□ -0.31
CACNA1A-216ENST00000635742 PHRF1Q9P1Y6 1649 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-216ENST00000635742 IRX6P78412 446 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-216ENST00000635742 MED1Q15648 1581 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-216ENST00000635742 KIF24Q5T7B8 1368 aa13.13□□□□□ -0.31
CACNA1A-216ENST00000635742 TMPOP42166 694 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-216ENST00000635742 AMPHP49418 695 aa13.13□□□□□ -0.31
CACNA1A-216ENST00000635742 CCDC27Q2M243 656 aa13.13□□□□□ -0.31
CACNA1A-216ENST00000635742 RTN4Q9NQC3 1192 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-216ENST00000635742 RTL1A6NKG5 1358 aa13.12□□□□□ -0.31
CACNA1A-216ENST00000635742 USP19O94966 1318 aa13.12□□□□□ -0.31
CACNA1A-216ENST00000635742 RNF123Q5XPI4 1314 aa13.12□□□□□ -0.31
CACNA1A-216ENST00000635742 BRINP3Q76B58 766 aa13.12□□□□□ -0.31
CACNA1A-216ENST00000635742 TRMT2AQ8IZ69 625 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-216ENST00000635742 CRYBG1Q9Y4K1 1723 aa13.12□□□□□ -0.31
CACNA1A-216ENST00000635742 DLG5Q8TDM6 1919 aa13.12□□□□□ -0.31
CACNA1A-216ENST00000635742 NPHP3Q7Z494 1330 aa13.12□□□□□ -0.31
CACNA1A-216ENST00000635742 TNS3Q68CZ2 1445 aa13.11□□□□□ -0.31
CACNA1A-216ENST00000635742 HOXC9P31274 260 aa13.11□□□□□ -0.31
CACNA1A-216ENST00000635742 LMOD2Q6P5Q4 547 aa13.11□□□□□ -0.31
CACNA1A-216ENST00000635742 AEBP1Q8IUX7 1158 aa13.11□□□□□ -0.31
CACNA1A-216ENST00000635742 PNNQ9H307 717 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-216ENST00000635742 E9PSI1 815 aa13.11□□□□□ -0.31
CACNA1A-216ENST00000635742 PHACTR3Q96KR7 559 aa13.11□□□□□ -0.31
CACNA1A-216ENST00000635742 RCAN3Q9UKA8 241 aa13.11□□□□□ -0.31
CACNA1A-216ENST00000635742 ARHGEF10O15013 1369 aa13.11□□□□□ -0.31
CACNA1A-216ENST00000635742 LTBP4Q8N2S1 1624 aa13.1□□□□□ -0.31
CACNA1A-216ENST00000635742 PLEKHG5O94827 1062 aa13.1□□□□□ -0.31
CACNA1A-216ENST00000635742 TRIM35Q9UPQ4 493 aa13.1□□□□□ -0.31
CACNA1A-216ENST00000635742 SULT6B1Q6IMI4 303 aa13.09□□□□□ -0.31
CACNA1A-216ENST00000635742 KCNH5Q8NCM2 988 aa13.09□□□□□ -0.31
CACNA1A-216ENST00000635742 NHSL1Q5SYE7 1610 aa13.09□□□□□ -0.31
CACNA1A-216ENST00000635742 WDR63Q8IWG1 891 aa13.09□□□□□ -0.31
CACNA1A-216ENST00000635742 IGSF1Q8N6C5 1336 aa13.08□□□□□ -0.31
CACNA1A-216ENST00000635742 GCP02774 474 aa13.08□□□□□ -0.32
CACNA1A-216ENST00000635742 RIPK4P57078 832 aa13.08□□□□□ -0.32
CACNA1A-216ENST00000635742 SLAIN2Q9P270 581 aa13.08□□□□□ -0.32
CACNA1A-216ENST00000635742 KDRP35968 1356 aa13.08□□□□□ -0.32
CACNA1A-216ENST00000635742 NFE2L2Q16236 605 aa13.07□□□□□ -0.32
CACNA1A-216ENST00000635742 RGPD2P0DJD1 1756 aa13.07□□□□□ -0.32
CACNA1A-216ENST00000635742 ZBTB7CA1YPR0 619 aa13.07□□□□□ -0.32
CACNA1A-216ENST00000635742 NEFMP07197 916 aa13.07□□□□□ -0.32
CACNA1A-216ENST00000635742 IP6K1Q92551 441 aa13.07□□□□□ -0.32
CACNA1A-216ENST00000635742 EYA1Q99502 592 aa13.07□□□□□ -0.32
CACNA1A-216ENST00000635742 SPATA31A3Q5VYP0 1347 aa13.07□□□□□ -0.32
CACNA1A-216ENST00000635742 RRP1P56182 461 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-216ENST00000635742 ARHGEF25Q86VW2 580 aa13.06□□□□□ -0.32
CACNA1A-216ENST00000635742 LTV1Q96GA3 475 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-216ENST00000635742 RGPD5Q99666 1765 aa13.06□□□□□ -0.32
CACNA1A-216ENST00000635742 ABCA3Q99758 1704 aa13.05□□□□□ -0.32
CACNA1A-216ENST00000635742 CAMTA1Q9Y6Y1 1673 aa13.04□□□□□ -0.32
CACNA1A-216ENST00000635742 COL18A1P39060 1754 aa13.04□□□□□ -0.32
CACNA1A-216ENST00000635742 SOS2Q07890 1332 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-216ENST00000635742 CABLES1Q8TDN4 633 aa13.03□□□□□ -0.32
CACNA1A-216ENST00000635742 THUMPD2Q9BTF0 503 aaKnown RBP13.03□□□□□ -0.32
CACNA1A-216ENST00000635742 ROBO1Q9Y6N7 1651 aa13.03□□□□□ -0.32
CACNA1A-216ENST00000635742 IL16Q14005 1332 aa13.03□□□□□ -0.32
CACNA1A-216ENST00000635742 FANCIQ9NVI1 1328 aa13.03□□□□□ -0.32
CACNA1A-216ENST00000635742 ZC3H6P61129 1189 aaKnown RBP13.01□□□□□ -0.33
CACNA1A-216ENST00000635742 USHBP1Q8N6Y0 703 aa13.01□□□□□ -0.33
CACNA1A-216ENST00000635742 TSR2Q969E8 191 aaKnown RBP13.01□□□□□ -0.33
CACNA1A-216ENST00000635742 MYH16Q9H6N6 1097 aa13.01□□□□□ -0.33
CACNA1A-216ENST00000635742 LMO7Q8WWI1 1683 aa13.01□□□□□ -0.33
CACNA1A-216ENST00000635742 ABCC6O95255 1503 aa13□□□□□ -0.33
CACNA1A-216ENST00000635742 NCAPD2Q15021 1401 aa13□□□□□ -0.33
CACNA1A-216ENST00000635742 FAM83GA6ND36 823 aa13□□□□□ -0.33
CACNA1A-216ENST00000635742 PLIN1O60240 522 aa13□□□□□ -0.33
CACNA1A-216ENST00000635742 AXIN2Q9Y2T1 843 aa13□□□□□ -0.33
CACNA1A-216ENST00000635742 LMOD3Q0VAK6 560 aa13□□□□□ -0.33
CACNA1A-216ENST00000635742 NBPF6Q5VWK0 638 aa13□□□□□ -0.33
CACNA1A-216ENST00000635742 ERICH6BQ5W0A0 696 aa13□□□□□ -0.33
CACNA1A-216ENST00000635742 LRRC59Q96AG4 307 aaKnown RBP13□□□□□ -0.33
CACNA1A-216ENST00000635742 NBPF4Q96M43 638 aa13□□□□□ -0.33
CACNA1A-216ENST00000635742 DCTN1Q14203 1278 aa12.99□□□□□ -0.33
CACNA1A-216ENST00000635742 MTHFSDQ2M296 383 aaKnown RBP12.99□□□□□ -0.33
CACNA1A-216ENST00000635742 ANKRD24Q8TF21 1146 aa12.99□□□□□ -0.33
CACNA1A-216ENST00000635742 LRRC37A3O60309 1634 aa12.99□□□□□ -0.33
CACNA1A-216ENST00000635742 AHDC1Q5TGY3 1603 aaPredicted RBP12.99□□□□□ -0.33
CACNA1A-216ENST00000635742 CPDO75976 1380 aa12.98□□□□□ -0.33
CACNA1A-216ENST00000635742 KIAA0232Q92628 1395 aa12.98□□□□□ -0.33
CACNA1A-216ENST00000635742 FAM208AQ9UK61 1670 aaKnown RBP12.98□□□□□ -0.33
CACNA1A-216ENST00000635742 ERBB3P21860 1342 aa12.98□□□□□ -0.33
CACNA1A-216ENST00000635742 BCAR3O75815 825 aa12.97□□□□□ -0.33
CACNA1A-216ENST00000635742 EXOSC9Q06265 439 aaKnown RBP12.97□□□□□ -0.33
CACNA1A-216ENST00000635742 ZNF853P0CG23 659 aa12.96□□□□□ -0.33
CACNA1A-216ENST00000635742 CALD1Q05682 793 aaKnown RBP12.96□□□□□ -0.33
CACNA1A-216ENST00000635742 CHRNA2Q15822 529 aa12.96□□□□□ -0.33
CACNA1A-216ENST00000635742 MCM10Q7L590 875 aa12.96□□□□□ -0.33
CACNA1A-216ENST00000635742 LAS1LQ9Y4W2 734 aaKnown RBP12.96□□□□□ -0.33
CACNA1A-216ENST00000635742 C20orf194Q5TEA3 1177 aa12.96□□□□□ -0.34
CACNA1A-216ENST00000635742 GAS2L2Q8NHY3 880 aa12.96□□□□□ -0.34
CACNA1A-216ENST00000635742 IFT57Q9NWB7 429 aa12.96□□□□□ -0.34
CACNA1A-216ENST00000635742 PPP4R2Q9NY27 417 aa12.96□□□□□ -0.34
CACNA1A-216ENST00000635742 RARSP54136 660 aaKnown RBP12.95□□□□□ -0.34
CACNA1A-216ENST00000635742 CRB1P82279 1406 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms