RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 ZBTB9Q96C00 473 aa20.58■□□□□ 0.88
CACNA1A-215ENST00000635727 LRRCC1Q9C099 1032 aa20.58■□□□□ 0.88
CACNA1A-215ENST00000635727 ROCK1Q13464 1354 aa20.57■□□□□ 0.88
CACNA1A-215ENST00000635727 RAB3GAP2Q9H2M9 1393 aa20.57■□□□□ 0.88
CACNA1A-215ENST00000635727 CEP164Q9UPV0 1460 aa20.57■□□□□ 0.88
CACNA1A-215ENST00000635727 MRPS9P82933 396 aaKnown RBP20.56■□□□□ 0.88
CACNA1A-215ENST00000635727 ZNF354CQ86Y25 554 aa20.56■□□□□ 0.88
CACNA1A-215ENST00000635727 TDO2P48775 406 aa20.55■□□□□ 0.88
CACNA1A-215ENST00000635727 CCDC178Q5BJE1 867 aa20.55■□□□□ 0.88
CACNA1A-215ENST00000635727 MPHOSPH8Q99549 860 aa20.55■□□□□ 0.88
CACNA1A-215ENST00000635727 GNL3LQ9NVN8 582 aaKnown RBP20.55■□□□□ 0.88
CACNA1A-215ENST00000635727 API5Q9BZZ5 524 aaKnown RBP20.55■□□□□ 0.88
CACNA1A-215ENST00000635727 FHAD1B1AJZ9 1412 aa20.54■□□□□ 0.88
CACNA1A-215ENST00000635727 C11orf95C9JLR9 678 aaPredicted RBP20.54■□□□□ 0.88
CACNA1A-215ENST00000635727 NLRP6P59044 892 aa20.54■□□□□ 0.88
CACNA1A-215ENST00000635727 TRERF1Q96PN7 1200 aa20.54■□□□□ 0.88
CACNA1A-215ENST00000635727 ARL1P40616 181 aaPredicted RBP20.54■□□□□ 0.88
CACNA1A-215ENST00000635727 CCDC91Q7Z6B0 441 aa20.54■□□□□ 0.88
CACNA1A-215ENST00000635727 TNMDQ9H2S6 317 aa20.54■□□□□ 0.88
CACNA1A-215ENST00000635727 ZNF396Q96N95 335 aaPredicted RBP20.54■□□□□ 0.88
CACNA1A-215ENST00000635727 CABP4P57796 275 aa20.54■□□□□ 0.88
CACNA1A-215ENST00000635727 RAI14Q9P0K7 980 aa20.53■□□□□ 0.88
CACNA1A-215ENST00000635727 WWC3Q9ULE0 1092 aa20.53■□□□□ 0.88
CACNA1A-215ENST00000635727 CBX1P83916 185 aa20.53■□□□□ 0.88
CACNA1A-215ENST00000635727 TOM1L2Q6ZVM7 507 aa20.53■□□□□ 0.88
CACNA1A-215ENST00000635727 PRDM2Q13029 1718 aa20.53■□□□□ 0.88
CACNA1A-215ENST00000635727 EIF5P55010 431 aaKnown RBP20.52■□□□□ 0.88
CACNA1A-215ENST00000635727 CARMIL1Q5VZK9 1371 aa20.52■□□□□ 0.88
CACNA1A-215ENST00000635727 XPCQ01831 940 aaPredicted RBP20.52■□□□□ 0.88
CACNA1A-215ENST00000635727 HOMER2Q9NSB8 354 aa20.52■□□□□ 0.88
CACNA1A-215ENST00000635727 APBB1IPQ7Z5R6 666 aaPredicted RBP20.52■□□□□ 0.88
CACNA1A-215ENST00000635727 CAMK4Q16566 473 aa20.52■□□□□ 0.87
CACNA1A-215ENST00000635727 RAD54L2Q9Y4B4 1467 aa20.51■□□□□ 0.87
CACNA1A-215ENST00000635727 MMRN2Q9H8L6 949 aa20.51■□□□□ 0.87
CACNA1A-215ENST00000635727 INCENPQ9NQS7 918 aa20.51■□□□□ 0.87
CACNA1A-215ENST00000635727 TRIM21P19474 475 aaKnown RBP20.51■□□□□ 0.87
CACNA1A-215ENST00000635727 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.51■□□□□ 0.87
CACNA1A-215ENST00000635727 SPTY2D1Q68D10 685 aaPredicted RBP20.5■□□□□ 0.87
CACNA1A-215ENST00000635727 KLHL10Q6JEL2 608 aa20.5■□□□□ 0.87
CACNA1A-215ENST00000635727 GSTTP1A0A1W2PQM5 241 aa20.5■□□□□ 0.87
CACNA1A-215ENST00000635727 JAKMIP3Q5VZ66 844 aa20.5■□□□□ 0.87
CACNA1A-215ENST00000635727 ABCF2Q9UG63 623 aa20.5■□□□□ 0.87
CACNA1A-215ENST00000635727 WASHC2AQ641Q2 1341 aa20.5■□□□□ 0.87
CACNA1A-215ENST00000635727 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.5■□□□□ 0.87
CACNA1A-215ENST00000635727 STAMBPO95630 424 aa20.49■□□□□ 0.87
CACNA1A-215ENST00000635727 CCDC82Q8N4S0 544 aa20.49■□□□□ 0.87
CACNA1A-215ENST00000635727 TRIM22Q8IYM9 498 aa20.49■□□□□ 0.87
CACNA1A-215ENST00000635727 CARMIL2Q6F5E8 1435 aa20.49■□□□□ 0.87
CACNA1A-215ENST00000635727 CCDC66A2RUB6 948 aa20.49■□□□□ 0.87
CACNA1A-215ENST00000635727 DDX11Q96FC9 970 aa20.49■□□□□ 0.87
CACNA1A-215ENST00000635727 LUC7LQ9NQ29 371 aaKnown RBP20.49■□□□□ 0.87
CACNA1A-215ENST00000635727 PRDM10Q9NQV6 1147 aa20.49■□□□□ 0.87
CACNA1A-215ENST00000635727 CDC45O75419 566 aa20.49■□□□□ 0.87
CACNA1A-215ENST00000635727 LRP2BPQ9P2M1 347 aa20.48■□□□□ 0.87
CACNA1A-215ENST00000635727 PUF60Q9UHX1 559 aaKnown RBP20.48■□□□□ 0.87
CACNA1A-215ENST00000635727 TRAK2O60296 914 aa20.48■□□□□ 0.87
CACNA1A-215ENST00000635727 TMEM132EQ6IEE7 984 aa20.48■□□□□ 0.87
CACNA1A-215ENST00000635727 ZNF526Q8TF50 670 aaPredicted RBP20.48■□□□□ 0.87
CACNA1A-215ENST00000635727 VTI1AQ96AJ9 217 aa20.47■□□□□ 0.87
CACNA1A-215ENST00000635727 CEP57L1Q8IYX8 460 aa20.47■□□□□ 0.87
CACNA1A-215ENST00000635727 MINDY4BA8MYZ0 360 aa20.46■□□□□ 0.87
CACNA1A-215ENST00000635727 PDE3BQ13370 1112 aa20.46■□□□□ 0.87
CACNA1A-215ENST00000635727 AEBP1Q8IUX7 1158 aa20.46■□□□□ 0.87
CACNA1A-215ENST00000635727 TAF4BQ92750 862 aa20.46■□□□□ 0.87
CACNA1A-215ENST00000635727 TMCO4Q5TGY1 634 aa20.46■□□□□ 0.87
CACNA1A-215ENST00000635727 FERMT2Q96AC1 680 aa20.46■□□□□ 0.87
CACNA1A-215ENST00000635727 RABEP1Q15276 862 aa20.46■□□□□ 0.87
CACNA1A-215ENST00000635727 CCDC57Q2TAC2 916 aa20.46■□□□□ 0.87
CACNA1A-215ENST00000635727 CWC27Q6UX04 472 aaKnown RBP20.45■□□□□ 0.86
CACNA1A-215ENST00000635727 FILIP1Q7Z7B0 1213 aa20.45■□□□□ 0.86
CACNA1A-215ENST00000635727 CTNNA2P26232 953 aa20.45■□□□□ 0.86
CACNA1A-215ENST00000635727 CRACR2BQ8N4Y2 399 aaPredicted RBP20.45■□□□□ 0.86
CACNA1A-215ENST00000635727 CCDC144AA2RUR9 1427 aa20.45■□□□□ 0.86
CACNA1A-215ENST00000635727 VGFO15240 615 aaPredicted RBP20.45■□□□□ 0.86
CACNA1A-215ENST00000635727 BMP2KQ9NSY1 1161 aaPredicted RBP20.45■□□□□ 0.86
CACNA1A-215ENST00000635727 SLC26A8Q96RN1 970 aa20.45■□□□□ 0.86
CACNA1A-215ENST00000635727 CCDC30Q5VVM6 783 aa20.44■□□□□ 0.86
CACNA1A-215ENST00000635727 IDH1O75874 414 aaKnown RBP20.44■□□□□ 0.86
CACNA1A-215ENST00000635727 RNF187Q5TA31 235 aaPredicted RBP20.44■□□□□ 0.86
CACNA1A-215ENST00000635727 RUNDC1Q96C34 613 aa20.44■□□□□ 0.86
CACNA1A-215ENST00000635727 UBAC1Q9BSL1 405 aa20.44■□□□□ 0.86
CACNA1A-215ENST00000635727 USP8P40818 1118 aa20.44■□□□□ 0.86
CACNA1A-215ENST00000635727 CCP110O43303 1012 aa20.44■□□□□ 0.86
CACNA1A-215ENST00000635727 NACAP1Q9BZK3 213 aa20.44■□□□□ 0.86
CACNA1A-215ENST00000635727 POTEJP0CG39 1038 aa20.43■□□□□ 0.86
CACNA1A-215ENST00000635727 GUCY1B3Q02153 619 aa20.43■□□□□ 0.86
CACNA1A-215ENST00000635727 BRPF3Q9ULD4 1205 aa20.43■□□□□ 0.86
CACNA1A-215ENST00000635727 PPP4R3AQ6IN85 833 aa20.43■□□□□ 0.86
CACNA1A-215ENST00000635727 LARP1Q6PKG0 1096 aaKnown RBP20.43■□□□□ 0.86
CACNA1A-215ENST00000635727 POLR3DP05423 398 aaPredicted RBP20.43■□□□□ 0.86
CACNA1A-215ENST00000635727 CCDC96Q2M329 555 aa20.43■□□□□ 0.86
CACNA1A-215ENST00000635727 ANKIB1Q9P2G1 1089 aa20.43■□□□□ 0.86
CACNA1A-215ENST00000635727 ZMYND15Q9H091 742 aa20.42■□□□□ 0.86
CACNA1A-215ENST00000635727 GPATCH11Q8N954 259 aa20.42■□□□□ 0.86
CACNA1A-215ENST00000635727 LMAN1P49257 510 aa20.42■□□□□ 0.86
CACNA1A-215ENST00000635727 IFFO1Q0D2I5 559 aa20.42■□□□□ 0.86
CACNA1A-215ENST00000635727 EPB41L2O43491 1005 aaKnown RBP20.42■□□□□ 0.86
CACNA1A-215ENST00000635727 UQCRHLA0A096LP55 91 aa20.42■□□□□ 0.86
CACNA1A-215ENST00000635727 LETM1O95202 739 aaPredicted RBP20.42■□□□□ 0.86
CACNA1A-215ENST00000635727 UQCRHP07919 91 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms