RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 FANCIQ9NVI1 1328 aa7.18□□□□□ -1.26
NEK3-211ENST00000629912 DLG5Q8TDM6 1919 aa7.17□□□□□ -1.26
NEK3-211ENST00000629912 HMOX1P09601 288 aa7.17□□□□□ -1.26
NEK3-211ENST00000629912 GNAI1P63096 354 aa7.17□□□□□ -1.26
NEK3-211ENST00000629912 ALDH1L2Q3SY69 923 aa7.17□□□□□ -1.26
NEK3-211ENST00000629912 IFT57Q9NWB7 429 aa7.17□□□□□ -1.26
NEK3-211ENST00000629912 PHF8Q9UPP1 1060 aa7.17□□□□□ -1.26
NEK3-211ENST00000629912 SBNO1A3KN83 1393 aa7.17□□□□□ -1.26
NEK3-211ENST00000629912 ADGRL3Q9HAR2 1447 aa7.17□□□□□ -1.26
NEK3-211ENST00000629912 RGPD1P0DJD0 1748 aa7.16□□□□□ -1.26
NEK3-211ENST00000629912 PEAK1Q9H792 1746 aa7.16□□□□□ -1.26
NEK3-211ENST00000629912 NLRP6P59044 892 aa7.16□□□□□ -1.26
NEK3-211ENST00000629912 HSP90AB2PQ58FF8 381 aa7.16□□□□□ -1.26
NEK3-211ENST00000629912 ZKSCAN2Q63HK3 967 aa7.16□□□□□ -1.26
NEK3-211ENST00000629912 TSR2Q969E8 191 aaKnown RBP7.16□□□□□ -1.26
NEK3-211ENST00000629912 MAP3K19Q56UN5 1328 aa7.16□□□□□ -1.26
NEK3-211ENST00000629912 NWD1Q149M9 1564 aa7.16□□□□□ -1.26
NEK3-211ENST00000629912 PIK3C2AO00443 1686 aa7.16□□□□□ -1.26
NEK3-211ENST00000629912 IPO8O15397 1037 aaKnown RBP7.15□□□□□ -1.26
NEK3-211ENST00000629912 CANXP27824 592 aaKnown RBP7.15□□□□□ -1.26
NEK3-211ENST00000629912 SULT6B1Q6IMI4 303 aa7.15□□□□□ -1.26
NEK3-211ENST00000629912 PANK1Q8TE04 598 aa7.15□□□□□ -1.26
NEK3-211ENST00000629912 CFAP44Q96MT7 982 aa7.15□□□□□ -1.26
NEK3-211ENST00000629912 ARHGEF10O15013 1369 aa7.15□□□□□ -1.26
NEK3-211ENST00000629912 FLT4P35916 1363 aa7.15□□□□□ -1.26
NEK3-211ENST00000629912 MARF1Q9Y4F3 1742 aaKnown RBP7.15□□□□□ -1.27
NEK3-211ENST00000629912 HTATSF1O43719 755 aaKnown RBP7.14□□□□□ -1.27
NEK3-211ENST00000629912 VAMP4O75379 141 aa7.14□□□□□ -1.27
NEK3-211ENST00000629912 KDRP35968 1356 aa7.14□□□□□ -1.27
NEK3-211ENST00000629912 AMPHP49418 695 aa7.14□□□□□ -1.27
NEK3-211ENST00000629912 DZIP1LQ8IYY4 767 aaKnown RBP7.14□□□□□ -1.27
NEK3-211ENST00000629912 ABTB2Q8N961 1025 aa7.14□□□□□ -1.27
NEK3-211ENST00000629912 SSH1Q8WYL5 1049 aa7.14□□□□□ -1.27
NEK3-211ENST00000629912 ARHGAP45Q92619 1136 aa7.14□□□□□ -1.27
NEK3-211ENST00000629912 FRAT1Q92837 279 aaPredicted RBP7.14□□□□□ -1.27
NEK3-211ENST00000629912 CLUAP1Q96AJ1 413 aa7.14□□□□□ -1.27
NEK3-211ENST00000629912 COG6Q9Y2V7 657 aa7.14□□□□□ -1.27
NEK3-211ENST00000629912 NCOA3Q9Y6Q9 1424 aa7.14□□□□□ -1.27
NEK3-211ENST00000629912 IGSF1Q8N6C5 1336 aa7.13□□□□□ -1.27
NEK3-211ENST00000629912 CHL1O00533 1208 aa7.13□□□□□ -1.27
NEK3-211ENST00000629912 RLBP1P12271 317 aa7.13□□□□□ -1.27
NEK3-211ENST00000629912 HOXC9P31274 260 aa7.13□□□□□ -1.27
NEK3-211ENST00000629912 PSME1Q06323 249 aa7.13□□□□□ -1.27
NEK3-211ENST00000629912 MVPQ14764 893 aaKnown RBP7.13□□□□□ -1.27
NEK3-211ENST00000629912 ATF7IPQ6VMQ6 1270 aa7.13□□□□□ -1.27
NEK3-211ENST00000629912 PROSER2Q86WR7 435 aaPredicted RBP7.13□□□□□ -1.27
NEK3-211ENST00000629912 AEBP1Q8IUX7 1158 aa7.13□□□□□ -1.27
NEK3-211ENST00000629912 EYA1Q99502 592 aa7.13□□□□□ -1.27
NEK3-211ENST00000629912 C19orf44Q9H6X5 657 aa7.13□□□□□ -1.27
NEK3-211ENST00000629912 SMC4Q9NTJ3 1288 aa7.13□□□□□ -1.27
NEK3-211ENST00000629912 KIF16BQ96L93 1317 aa7.12□□□□□ -1.27
NEK3-211ENST00000629912 IGHDP01880 384 aa7.12□□□□□ -1.27
NEK3-211ENST00000629912 PDE4AP27815 886 aa7.12□□□□□ -1.27
NEK3-211ENST00000629912 HAP1P54257 671 aaPredicted RBP7.12□□□□□ -1.27
NEK3-211ENST00000629912 ESCO1Q5FWF5 840 aa7.12□□□□□ -1.27
NEK3-211ENST00000629912 MRPL50Q8N5N7 158 aaKnown RBP7.12□□□□□ -1.27
NEK3-211ENST00000629912 KCNH5Q8NCM2 988 aa7.12□□□□□ -1.27
NEK3-211ENST00000629912 IP6K1Q92551 441 aa7.12□□□□□ -1.27
NEK3-211ENST00000629912 BACH2Q9BYV9 841 aa7.12□□□□□ -1.27
NEK3-211ENST00000629912 MBIPQ9NS73 344 aa7.12□□□□□ -1.27
NEK3-211ENST00000629912 NOB1Q9ULX3 412 aaKnown RBP7.12□□□□□ -1.27
NEK3-211ENST00000629912 MST1RQ04912 1400 aa7.11□□□□□ -1.27
NEK3-211ENST00000629912 RTL1A6NKG5 1358 aa7.11□□□□□ -1.27
NEK3-211ENST00000629912 PAK3O75914 559 aaPredicted RBP7.11□□□□□ -1.27
NEK3-211ENST00000629912 TRIM27P14373 513 aa7.11□□□□□ -1.27
NEK3-211ENST00000629912 GAS2L2Q8NHY3 880 aa7.11□□□□□ -1.27
NEK3-211ENST00000629912 THUMPD2Q9BTF0 503 aaKnown RBP7.11□□□□□ -1.27
NEK3-211ENST00000629912 BCL2L13Q9BXK5 485 aa7.11□□□□□ -1.27
NEK3-211ENST00000629912 CHMP4BQ9H444 224 aaKnown RBP7.11□□□□□ -1.27
NEK3-211ENST00000629912 RWDD1Q9H446 243 aaPredicted RBP7.11□□□□□ -1.27
NEK3-211ENST00000629912 BABAM1Q9NWV8 329 aa7.11□□□□□ -1.27
NEK3-211ENST00000629912 DDX19BQ9UMR2 479 aa7.11□□□□□ -1.27
NEK3-211ENST00000629912 TNNQ9UQP3 1299 aa7.11□□□□□ -1.27
NEK3-211ENST00000629912 LAS1LQ9Y4W2 734 aaKnown RBP7.11□□□□□ -1.27
NEK3-211ENST00000629912 PCDHB15Q9Y5E8 787 aa7.11□□□□□ -1.27
NEK3-211ENST00000629912 PHRF1Q9P1Y6 1649 aaKnown RBP7.11□□□□□ -1.27
NEK3-211ENST00000629912 KIAA0232Q92628 1395 aa7.1□□□□□ -1.27
NEK3-211ENST00000629912 ADRA2BP18089 450 aa7.1□□□□□ -1.27
NEK3-211ENST00000629912 MTHFSDQ2M296 383 aaKnown RBP7.1□□□□□ -1.27
NEK3-211ENST00000629912 TWISTNBQ3B726 338 aaPredicted RBP7.1□□□□□ -1.27
NEK3-211ENST00000629912 C14orf37Q86TY3 774 aa7.1□□□□□ -1.27
NEK3-211ENST00000629912 FTSJ3Q8IY81 847 aaKnown RBP7.1□□□□□ -1.27
NEK3-211ENST00000629912 C8orf58Q8NAV2 365 aa7.1□□□□□ -1.27
NEK3-211ENST00000629912 RBM33Q96EV2 1170 aaKnown RBP7.1□□□□□ -1.27
NEK3-211ENST00000629912 CRB1P82279 1406 aa7.1□□□□□ -1.27
NEK3-211ENST00000629912 FAM83GA6ND36 823 aa7.09□□□□□ -1.27
NEK3-211ENST00000629912 SOX12O15370 315 aa7.09□□□□□ -1.27
NEK3-211ENST00000629912 HDAC1Q13547 482 aaPredicted RBP7.09□□□□□ -1.27
NEK3-211ENST00000629912 DCTN1Q14203 1278 aa7.09□□□□□ -1.27
NEK3-211ENST00000629912 NUTM2GQ5VZR2 741 aa7.09□□□□□ -1.27
NEK3-211ENST00000629912 KRT28Q7Z3Y7 464 aa7.09□□□□□ -1.27
NEK3-211ENST00000629912 ARHGEF25Q86VW2 580 aa7.09□□□□□ -1.27
NEK3-211ENST00000629912 TSPYL6Q8N831 410 aa7.09□□□□□ -1.27
NEK3-211ENST00000629912 RTF1Q92541 710 aaKnown RBP7.09□□□□□ -1.27
NEK3-211ENST00000629912 ORAI2Q96SN7 254 aa7.09□□□□□ -1.27
NEK3-211ENST00000629912 ZBTB40Q9NUA8 1239 aa7.09□□□□□ -1.27
NEK3-211ENST00000629912 NFAT5O94916 1531 aa7.09□□□□□ -1.27
NEK3-211ENST00000629912 LTN1O94822 1766 aa7.09□□□□□ -1.27
NEK3-211ENST00000629912 C1orf167Q5SNV9 1468 aa7.09□□□□□ -1.27
NEK3-211ENST00000629912 KIF1AQ12756 1690 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms